RNA–Protein interactions for RNA: ENST00000396355.5

NDE1-202, Transcript of nudE neurodevelopment protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NDE1, Length 3,936 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1-202ENST00000396355 CDK5RAP2Q96SN8 1893 aa8.9□□□□□ -0.98
NDE1-202ENST00000396355 C1orf232A0A0U1RR37 186 aa8.9□□□□□ -0.99
NDE1-202ENST00000396355 RASA4BC9J798 803 aa8.9□□□□□ -0.99
NDE1-202ENST00000396355 GOLGA8RI6L899 631 aa8.9□□□□□ -0.99
NDE1-202ENST00000396355 RASA4O43374 803 aa8.9□□□□□ -0.99
NDE1-202ENST00000396355 YWHAGP61981 247 aaKnown RBP eCLIP8.9□□□□□ -0.99
NDE1-202ENST00000396355 ZNF268Q14587 947 aaPredicted RBP8.9□□□□□ -0.99
NDE1-202ENST00000396355 CCDC153Q494R4 210 aa8.9□□□□□ -0.99
NDE1-202ENST00000396355 TTC38Q5R3I4 469 aa8.9□□□□□ -0.99
NDE1-202ENST00000396355 TMTC4Q5T4D3 741 aa8.9□□□□□ -0.99
NDE1-202ENST00000396355 PIK3AP1Q6ZUJ8 805 aa8.9□□□□□ -0.99
NDE1-202ENST00000396355 DQX1Q8TE96 717 aaKnown RBP8.9□□□□□ -0.99
NDE1-202ENST00000396355 LRRC15Q8TF66 581 aa8.9□□□□□ -0.99
NDE1-202ENST00000396355 IFT122Q9HBG6 1241 aa8.9□□□□□ -0.99
NDE1-202ENST00000396355 ITGB1BP2Q9UKP3 347 aa8.9□□□□□ -0.99
NDE1-202ENST00000396355 B2RBV5 119 aa8.89□□□□□ -0.99
NDE1-202ENST00000396355 ADM5C9JUS6 153 aa8.89□□□□□ -0.99
NDE1-202ENST00000396355 H3BRJ5 948 aa8.89□□□□□ -0.99
NDE1-202ENST00000396355 NOP56O00567 594 aaKnown RBP8.89□□□□□ -0.99
NDE1-202ENST00000396355 FAM163BP0C2L3 166 aa8.89□□□□□ -0.99
NDE1-202ENST00000396355 CTNNA2P26232 953 aa8.89□□□□□ -0.99
NDE1-202ENST00000396355 LONP1P36776 959 aaKnown RBP8.89□□□□□ -0.99
NDE1-202ENST00000396355 SLC34A1Q06495 639 aa8.89□□□□□ -0.99
NDE1-202ENST00000396355 GRAPQ13588 217 aa8.89□□□□□ -0.99
NDE1-202ENST00000396355 ITPRIPL1Q6GPH6 555 aa8.89□□□□□ -0.99
NDE1-202ENST00000396355 DLK2Q6UY11 383 aa8.89□□□□□ -0.99
NDE1-202ENST00000396355 SP8Q8IXZ3 490 aa8.89□□□□□ -0.99
NDE1-202ENST00000396355 MYOCDQ8IZQ8 938 aa8.89□□□□□ -0.99
NDE1-202ENST00000396355 APPL2Q8NEU8 664 aa8.89□□□□□ -0.99
NDE1-202ENST00000396355 GRAPLQ8TC17 118 aaPredicted RBP8.89□□□□□ -0.99
NDE1-202ENST00000396355 SRPK1Q96SB4 655 aaKnown RBP8.89□□□□□ -0.99
NDE1-202ENST00000396355 SUN2Q9UH99 717 aa8.89□□□□□ -0.99
NDE1-202ENST00000396355 SPEF1Q9Y4P9 236 aa8.89□□□□□ -0.99
NDE1-202ENST00000396355 PCNTO95613 3336 aa8.89□□□□□ -0.99
NDE1-202ENST00000396355 CCDC194A0A1B0GVG4 234 aa8.89□□□□□ -0.99
NDE1-202ENST00000396355 A6NHS1 94 aa8.89□□□□□ -0.99
NDE1-202ENST00000396355 HNRNPCL2B2RXH8 293 aa8.89□□□□□ -0.99
NDE1-202ENST00000396355 F8VZ95 297 aa8.89□□□□□ -0.99
NDE1-202ENST00000396355 HNRNPCL1O60812 293 aaKnown RBP8.89□□□□□ -0.99
NDE1-202ENST00000396355 OXSR1O95747 527 aaPredicted RBP8.89□□□□□ -0.99
NDE1-202ENST00000396355 KRT8P05787 483 aa8.89□□□□□ -0.99
NDE1-202ENST00000396355 CDH3P22223 829 aa8.89□□□□□ -0.99
NDE1-202ENST00000396355 TRPC1P48995 793 aa8.89□□□□□ -0.99
NDE1-202ENST00000396355 SCNN1DP51172 638 aa8.89□□□□□ -0.99
NDE1-202ENST00000396355 RIPK1Q13546 671 aa8.89□□□□□ -0.99
NDE1-202ENST00000396355 MTMR2Q13614 643 aa8.89□□□□□ -0.99
NDE1-202ENST00000396355 FBXO33Q7Z6M2 555 aa8.89□□□□□ -0.99
NDE1-202ENST00000396355 BBOF1Q8ND07 529 aa8.89□□□□□ -0.99
NDE1-202ENST00000396355 TRPM4Q8TD43 1214 aa8.89□□□□□ -0.99
NDE1-202ENST00000396355 RASGRP4Q8TDF6 673 aa8.89□□□□□ -0.99
NDE1-202ENST00000396355 NAT14Q8WUY8 206 aa8.89□□□□□ -0.99
NDE1-202ENST00000396355 MTBPQ96DY7 904 aa8.89□□□□□ -0.99
NDE1-202ENST00000396355 LRGUKQ96M69 825 aa8.89□□□□□ -0.99
NDE1-202ENST00000396355 MMTAG2Q9BU76 263 aaKnown RBP8.89□□□□□ -0.99
NDE1-202ENST00000396355 WDR6Q9NNW5 1121 aaKnown RBP8.89□□□□□ -0.99
NDE1-202ENST00000396355 WDR70Q9NW82 654 aa8.89□□□□□ -0.99
NDE1-202ENST00000396355 TXNDC16Q9P2K2 825 aa8.89□□□□□ -0.99
NDE1-202ENST00000396355 TMEM98Q9Y2Y6 226 aa8.89□□□□□ -0.99
NDE1-202ENST00000396355 ECE2O60344 883 aa8.89□□□□□ -0.99
NDE1-202ENST00000396355 KLHL41O60662 606 aa8.89□□□□□ -0.99
NDE1-202ENST00000396355 CHEK2O96017 543 aa8.89□□□□□ -0.99
NDE1-202ENST00000396355 MCF2P10911 925 aa8.89□□□□□ -0.99
NDE1-202ENST00000396355 HSPA9P38646 679 aaKnown RBP8.89□□□□□ -0.99
NDE1-202ENST00000396355 POLGP54098 1239 aaPredicted RBP8.89□□□□□ -0.99
NDE1-202ENST00000396355 KRT72Q14CN4 511 aa8.89□□□□□ -0.99
NDE1-202ENST00000396355 ANGEL2Q5VTE6 544 aaKnown RBP8.89□□□□□ -0.99
NDE1-202ENST00000396355 SLC2A7Q6PXP3 512 aa8.89□□□□□ -0.99
NDE1-202ENST00000396355 GATAD2AQ86YP4 633 aa8.89□□□□□ -0.99
NDE1-202ENST00000396355 MB21D1Q8N884 522 aa8.89□□□□□ -0.99
NDE1-202ENST00000396355 FAM13CQ8NE31 585 aa8.89□□□□□ -0.99
NDE1-202ENST00000396355 IL17RBQ9NRM6 502 aa8.89□□□□□ -0.99
NDE1-202ENST00000396355 MCM9Q9NXL9 1143 aa8.89□□□□□ -0.99
NDE1-202ENST00000396355 VPS51Q9UID3 782 aa8.89□□□□□ -0.99
NDE1-202ENST00000396355 ANGPTL3Q9Y5C1 460 aa8.89□□□□□ -0.99
NDE1-202ENST00000396355 CEP290O15078 2479 aa8.89□□□□□ -0.99
NDE1-202ENST00000396355 USP1O94782 785 aa8.88□□□□□ -0.99
NDE1-202ENST00000396355 EPB41P11171 864 aaKnown RBP8.88□□□□□ -0.99
NDE1-202ENST00000396355 NELFEP18615 380 aaKnown RBP8.88□□□□□ -0.99
NDE1-202ENST00000396355 RGS2P41220 211 aa8.88□□□□□ -0.99
NDE1-202ENST00000396355 ARFIP2P53365 341 aa8.88□□□□□ -0.99
NDE1-202ENST00000396355 DR1Q01658 176 aa8.88□□□□□ -0.99
NDE1-202ENST00000396355 BNIP1Q12981 228 aa8.88□□□□□ -0.99
NDE1-202ENST00000396355 TAF1BQ53T94 588 aaPredicted RBP8.88□□□□□ -0.99
NDE1-202ENST00000396355 DNAAF5Q86Y56 855 aa8.88□□□□□ -0.99
NDE1-202ENST00000396355 C4orf32Q8N8J7 132 aa8.88□□□□□ -0.99
NDE1-202ENST00000396355 GPKOWQ92917 476 aaPredicted RBP eCLIP8.88□□□□□ -0.99
NDE1-202ENST00000396355 SKA1Q96BD8 255 aa8.88□□□□□ -0.99
NDE1-202ENST00000396355 GCNAQ96QF7 691 aa8.88□□□□□ -0.99
NDE1-202ENST00000396355 TUBGCP5Q96RT8 1024 aa8.88□□□□□ -0.99
NDE1-202ENST00000396355 TMEM106CQ9BVX2 250 aa8.88□□□□□ -0.99
NDE1-202ENST00000396355 KIAA1683Q9H0B3 1180 aa8.88□□□□□ -0.99
NDE1-202ENST00000396355 TMEM60Q9H2L4 133 aa8.88□□□□□ -0.99
NDE1-202ENST00000396355 RRN3Q9NYV6 651 aa8.88□□□□□ -0.99
NDE1-202ENST00000396355 TLL2Q9Y6L7 1015 aa8.88□□□□□ -0.99
NDE1-202ENST00000396355 ZNF831Q5JPB2 1677 aa8.88□□□□□ -0.99
NDE1-202ENST00000396355 IRS2Q9Y4H2 1338 aa8.88□□□□□ -0.99
NDE1-202ENST00000396355 SPOPO43791 374 aa8.88□□□□□ -0.99
NDE1-202ENST00000396355 TBC1D12O60347 775 aa8.88□□□□□ -0.99
NDE1-202ENST00000396355 SNX3O60493 162 aa8.88□□□□□ -0.99
NDE1-202ENST00000396355 DDAH1O94760 285 aa8.88□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms