RNA–Protein interactions for RNA: ENST00000395853.5

MSH5-205, Transcript of mutS homolog 5, humanhuman

TSL 2 BASIC

Gene MSH5, Length 2,704 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-205ENST00000395853 HERC5Q9UII4 1024 aaKnown RBP9.41□□□□□ -0.9
MSH5-205ENST00000395853 NFS1Q9Y697 457 aa9.41□□□□□ -0.9
MSH5-205ENST00000395853 CAPN6Q9Y6Q1 641 aa9.41□□□□□ -0.9
MSH5-205ENST00000395853 NPHP3-ACAD11A0A0J9YXS1 232 aa9.4□□□□□ -0.9
MSH5-205ENST00000395853 HGSO14964 777 aaPredicted RBP9.4□□□□□ -0.9
MSH5-205ENST00000395853 KRT86O43790 486 aa9.4□□□□□ -0.9
MSH5-205ENST00000395853 ICMTO60725 284 aa9.4□□□□□ -0.9
MSH5-205ENST00000395853 KLRK1P26718 216 aa9.4□□□□□ -0.9
MSH5-205ENST00000395853 UBA7P41226 1012 aa9.4□□□□□ -0.9
MSH5-205ENST00000395853 TNNI2P48788 182 aa9.4□□□□□ -0.9
MSH5-205ENST00000395853 ALX1Q15699 326 aa9.4□□□□□ -0.9
MSH5-205ENST00000395853 HSP90AA5PQ58FG0 334 aa9.4□□□□□ -0.9
MSH5-205ENST00000395853 CEP78Q5JTW2 689 aa9.4□□□□□ -0.9
MSH5-205ENST00000395853 MAP3K21Q5TCX8 1036 aa9.4□□□□□ -0.9
MSH5-205ENST00000395853 SLC51AQ86UW1 340 aa9.4□□□□□ -0.9
MSH5-205ENST00000395853 FITM2Q8N6M3 262 aa9.4□□□□□ -0.9
MSH5-205ENST00000395853 HCAR2Q8TDS4 363 aa9.4□□□□□ -0.9
MSH5-205ENST00000395853 NRG4Q8WWG1 115 aa9.4□□□□□ -0.9
MSH5-205ENST00000395853 ATL1Q8WXF7 558 aa9.4□□□□□ -0.9
MSH5-205ENST00000395853 TMEM237Q96Q45 408 aa9.4□□□□□ -0.9
MSH5-205ENST00000395853 CSRNP1Q96S65 589 aa9.4□□□□□ -0.9
MSH5-205ENST00000395853 NAPBQ9H115 298 aa9.4□□□□□ -0.9
MSH5-205ENST00000395853 GIN1Q9NXP7 522 aa9.4□□□□□ -0.9
MSH5-205ENST00000395853 DSEQ9UL01 958 aa9.4□□□□□ -0.9
MSH5-205ENST00000395853 SNX12Q9UMY4 172 aa9.4□□□□□ -0.9
MSH5-205ENST00000395853 EPN1Q9Y6I3 576 aaPredicted RBP9.4□□□□□ -0.9
MSH5-205ENST00000395853 POLR2AP24928 1970 aaKnown RBP9.4□□□□□ -0.9
MSH5-205ENST00000395853 SFI1A8K8P3 1242 aa9.4□□□□□ -0.9
MSH5-205ENST00000395853 DCDC2CA8MYV0 355 aa9.4□□□□□ -0.9
MSH5-205ENST00000395853 PIK3CDO00329 1044 aa9.4□□□□□ -0.9
MSH5-205ENST00000395853 VILLO15195 856 aa9.4□□□□□ -0.9
MSH5-205ENST00000395853 PFDN6O15212 129 aa9.4□□□□□ -0.9
MSH5-205ENST00000395853 IDH3BO43837 385 aa9.4□□□□□ -0.9
MSH5-205ENST00000395853 NDUFA10O95299 355 aa9.4□□□□□ -0.9
MSH5-205ENST00000395853 CHN1P15882 459 aa9.4□□□□□ -0.9
MSH5-205ENST00000395853 IL32P24001 234 aa9.4□□□□□ -0.9
MSH5-205ENST00000395853 HSD17B3P37058 310 aa9.4□□□□□ -0.9
MSH5-205ENST00000395853 POLD2P49005 469 aa9.4□□□□□ -0.9
MSH5-205ENST00000395853 PPARAQ07869 468 aa9.4□□□□□ -0.9
MSH5-205ENST00000395853 C4orf46Q504U0 113 aa9.4□□□□□ -0.9
MSH5-205ENST00000395853 USP43Q70EL4 1123 aa9.4□□□□□ -0.9
MSH5-205ENST00000395853 PDZD8Q8NEN9 1154 aa9.4□□□□□ -0.9
MSH5-205ENST00000395853 OR2W6PQ8NHA6 318 aa9.4□□□□□ -0.9
MSH5-205ENST00000395853 KCNG4Q8TDN1 519 aa9.4□□□□□ -0.9
MSH5-205ENST00000395853 ZNF75CPQ92670 426 aaPredicted RBP9.4□□□□□ -0.9
MSH5-205ENST00000395853 EME1Q96AY2 570 aa9.4□□□□□ -0.9
MSH5-205ENST00000395853 FAM84BQ96KN1 310 aaPredicted RBP9.4□□□□□ -0.9
MSH5-205ENST00000395853 ACAP3Q96P50 834 aa9.4□□□□□ -0.9
MSH5-205ENST00000395853 FERD3LQ96RJ6 166 aa9.4□□□□□ -0.9
MSH5-205ENST00000395853 CIB1Q99828 191 aa9.4□□□□□ -0.9
MSH5-205ENST00000395853 HAUS8Q9BT25 410 aa9.4□□□□□ -0.9
MSH5-205ENST00000395853 CALN1Q9BXU9 219 aa9.4□□□□□ -0.9
MSH5-205ENST00000395853 MRPL9Q9BYD2 267 aaKnown RBP9.4□□□□□ -0.9
MSH5-205ENST00000395853 DENND2DQ9H6A0 471 aaPredicted RBP9.4□□□□□ -0.9
MSH5-205ENST00000395853 CCDC134Q9H6E4 229 aa9.4□□□□□ -0.9
MSH5-205ENST00000395853 PLGRKTQ9HBL7 147 aa9.4□□□□□ -0.9
MSH5-205ENST00000395853 XAB2Q9HCS7 855 aaKnown RBP9.4□□□□□ -0.9
MSH5-205ENST00000395853 UVRAGQ9P2Y5 699 aa9.4□□□□□ -0.9
MSH5-205ENST00000395853 SLC4A4Q9Y6R1 1079 aa9.4□□□□□ -0.9
MSH5-205ENST00000395853 COL1A1P02452 1464 aaPredicted RBP9.4□□□□□ -0.9
MSH5-205ENST00000395853 ZNF804BA4D1E1 1349 aa9.4□□□□□ -0.91
MSH5-205ENST00000395853 PDS5AQ29RF7 1337 aaKnown RBP9.4□□□□□ -0.91
MSH5-205ENST00000395853 CCDC169A6NNP5 214 aa9.4□□□□□ -0.91
MSH5-205ENST00000395853 SH2B2O14492 632 aaPredicted RBP9.4□□□□□ -0.91
MSH5-205ENST00000395853 HEXIM1O94992 359 aaKnown RBP9.4□□□□□ -0.91
MSH5-205ENST00000395853 PRKACAP17612 351 aa9.4□□□□□ -0.91
MSH5-205ENST00000395853 CDH3P22223 829 aa9.4□□□□□ -0.91
MSH5-205ENST00000395853 CYP7A1P22680 504 aa9.4□□□□□ -0.91
MSH5-205ENST00000395853 SOX10P56693 466 aa9.4□□□□□ -0.91
MSH5-205ENST00000395853 PLCB3Q01970 1234 aa9.4□□□□□ -0.91
MSH5-205ENST00000395853 SLC34A1Q06495 639 aa9.4□□□□□ -0.91
MSH5-205ENST00000395853 UBE4AQ14139 1066 aa9.4□□□□□ -0.91
MSH5-205ENST00000395853 NEK5Q6P3R8 708 aa9.4□□□□□ -0.91
MSH5-205ENST00000395853 C4orf22Q6V702 233 aa9.4□□□□□ -0.91
MSH5-205ENST00000395853 SAMD7Q7Z3H4 446 aa9.4□□□□□ -0.91
MSH5-205ENST00000395853 SULF1Q8IWU6 871 aa9.4□□□□□ -0.91
MSH5-205ENST00000395853 LZTR1Q8N653 840 aa9.4□□□□□ -0.91
MSH5-205ENST00000395853 RIN3Q8TB24 985 aa9.4□□□□□ -0.91
MSH5-205ENST00000395853 IGDCC4Q8TDY8 1250 aa9.4□□□□□ -0.91
MSH5-205ENST00000395853 ZFPM2Q8WW38 1151 aa9.4□□□□□ -0.91
MSH5-205ENST00000395853 ATXN2LQ8WWM7 1075 aaKnown RBP9.4□□□□□ -0.91
MSH5-205ENST00000395853 FAM20AQ96MK3 541 aa9.4□□□□□ -0.91
MSH5-205ENST00000395853 CNNM2Q9H8M5 875 aa9.4□□□□□ -0.91
MSH5-205ENST00000395853 POLMQ9NP87 494 aaPredicted RBP9.4□□□□□ -0.91
MSH5-205ENST00000395853 ABHD10Q9NUJ1 306 aa9.4□□□□□ -0.91
MSH5-205ENST00000395853 TRNAU1APQ9NX07 287 aaKnown RBP9.4□□□□□ -0.91
MSH5-205ENST00000395853 IL20Q9NYY1 176 aa9.4□□□□□ -0.91
MSH5-205ENST00000395853 ZSWIM5Q9P217 1185 aa9.4□□□□□ -0.91
MSH5-205ENST00000395853 ANGEL1Q9UNK9 670 aaKnown RBP9.4□□□□□ -0.91
MSH5-205ENST00000395853 CFL2Q9Y281 166 aa9.4□□□□□ -0.91
MSH5-205ENST00000395853 TELO2Q9Y4R8 837 aa9.4□□□□□ -0.91
MSH5-205ENST00000395853 PAPPA2Q9BXP8 1791 aa9.39□□□□□ -0.91
MSH5-205ENST00000395853 WDR19Q8NEZ3 1342 aa9.39□□□□□ -0.91
MSH5-205ENST00000395853 PITPNM2Q9BZ72 1349 aa9.39□□□□□ -0.91
MSH5-205ENST00000395853 ESYT3A0FGR9 886 aa9.39□□□□□ -0.91
MSH5-205ENST00000395853 CCDC160A6NGH7 325 aa9.39□□□□□ -0.91
MSH5-205ENST00000395853 ZSCAN5BA6NJL1 495 aa9.39□□□□□ -0.91
MSH5-205ENST00000395853 SMIM22K7EJ46 135 aa9.39□□□□□ -0.91
MSH5-205ENST00000395853 TEX33O43247 280 aa9.39□□□□□ -0.91
MSH5-205ENST00000395853 XPOTO43592 962 aaKnown RBP9.39□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms