RNA–Protein interactions for RNA: ENST00000395727.6

PTPN20-208, Transcript of protein tyrosine phosphatase, non-receptor type 20, humanhuman

TSL 1 (best) BASIC

Gene PTPN20, Length 790 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20-208ENST00000395727 CHRNA4P43681 627 aa6.82□□□□□ -1.32
PTPN20-208ENST00000395727 TRAPPC10P48553 1259 aa6.82□□□□□ -1.32
PTPN20-208ENST00000395727 POLGP54098 1239 aaPredicted RBP6.82□□□□□ -1.32
PTPN20-208ENST00000395727 COASYQ13057 564 aa6.82□□□□□ -1.32
PTPN20-208ENST00000395727 ADAM15Q13444 863 aa6.82□□□□□ -1.32
PTPN20-208ENST00000395727 KCNC3Q14003 757 aa6.82□□□□□ -1.32
PTPN20-208ENST00000395727 MXD4Q14582 209 aaPredicted RBP6.82□□□□□ -1.32
PTPN20-208ENST00000395727 SAFBQ15424 915 aaKnown RBP eCLIP6.82□□□□□ -1.32
PTPN20-208ENST00000395727 SMAD2Q15796 467 aaKnown RBP6.82□□□□□ -1.32
PTPN20-208ENST00000395727 CALCRLQ16602 461 aa6.82□□□□□ -1.32
PTPN20-208ENST00000395727 PAN2Q504Q3 1202 aaKnown RBP6.82□□□□□ -1.32
PTPN20-208ENST00000395727 CLLU1OSQ5K130 101 aa6.82□□□□□ -1.32
PTPN20-208ENST00000395727 FAM102BQ5T8I3 360 aa6.82□□□□□ -1.32
PTPN20-208ENST00000395727 HGSNATQ68CP4 663 aa6.82□□□□□ -1.32
PTPN20-208ENST00000395727 IGF2-ASQ6U949 168 aa6.82□□□□□ -1.32
PTPN20-208ENST00000395727 TMEM184AQ6ZMB5 413 aa6.82□□□□□ -1.32
PTPN20-208ENST00000395727 TRMT1LQ7Z2T5 733 aaKnown RBP6.82□□□□□ -1.32
PTPN20-208ENST00000395727 SRGAP1Q7Z6B7 1085 aa6.82□□□□□ -1.32
PTPN20-208ENST00000395727 FERMT3Q86UX7 667 aa6.82□□□□□ -1.32
PTPN20-208ENST00000395727 CD163Q86VB7 1156 aa6.82□□□□□ -1.32
PTPN20-208ENST00000395727 RHPN2Q8IUC4 686 aa6.82□□□□□ -1.32
PTPN20-208ENST00000395727 FBXO18Q8NFZ0 1043 aa6.82□□□□□ -1.32
PTPN20-208ENST00000395727 POF1BQ8WVV4 589 aa6.82□□□□□ -1.32
PTPN20-208ENST00000395727 CCDC51Q96ER9 411 aa6.82□□□□□ -1.32
PTPN20-208ENST00000395727 MSLNLQ96KJ4 702 aa6.82□□□□□ -1.32
PTPN20-208ENST00000395727 CEP170P1Q96L14 293 aa6.82□□□□□ -1.32
PTPN20-208ENST00000395727 FRMD6Q96NE9 622 aa6.82□□□□□ -1.32
PTPN20-208ENST00000395727 ZNF558Q96NG5 402 aa6.82□□□□□ -1.32
PTPN20-208ENST00000395727 FDXACB1Q9BRP7 624 aaPredicted RBP6.82□□□□□ -1.32
PTPN20-208ENST00000395727 CLEC4MQ9H2X3 399 aaPredicted RBP6.82□□□□□ -1.32
PTPN20-208ENST00000395727 TTC12Q9H892 705 aaPredicted RBP6.82□□□□□ -1.32
PTPN20-208ENST00000395727 ALG13Q9NP73 1137 aaKnown RBP6.82□□□□□ -1.32
PTPN20-208ENST00000395727 NGRNQ9NPE2 291 aaKnown RBP6.82□□□□□ -1.32
PTPN20-208ENST00000395727 OSGEPQ9NPF4 335 aa6.82□□□□□ -1.32
PTPN20-208ENST00000395727 TLR9Q9NR96 1032 aa6.82□□□□□ -1.32
PTPN20-208ENST00000395727 SUCLA2Q9P2R7 463 aaPredicted RBP6.82□□□□□ -1.32
PTPN20-208ENST00000395727 STK39Q9UEW8 545 aa6.82□□□□□ -1.32
PTPN20-208ENST00000395727 IRAK3Q9Y616 596 aa6.82□□□□□ -1.32
PTPN20-208ENST00000395727 BDP1A6H8Y1 2624 aa6.82□□□□□ -1.32
PTPN20-208ENST00000395727 MYO9BQ13459 2157 aa6.81□□□□□ -1.32
PTPN20-208ENST00000395727 TMEM150BA6NC51 233 aa6.81□□□□□ -1.32
PTPN20-208ENST00000395727 TBKBP1A7MCY6 615 aa6.81□□□□□ -1.32
PTPN20-208ENST00000395727 MBTPS2O43462 519 aa6.81□□□□□ -1.32
PTPN20-208ENST00000395727 JAK2O60674 1132 aa6.81□□□□□ -1.32
PTPN20-208ENST00000395727 FGFR1P11362 822 aa6.81□□□□□ -1.32
PTPN20-208ENST00000395727 U2AF2P26368 475 aaKnown RBP eCLIP6.81□□□□□ -1.32
PTPN20-208ENST00000395727 AXLP30530 894 aa6.81□□□□□ -1.32
PTPN20-208ENST00000395727 GNA15P30679 374 aa6.81□□□□□ -1.32
PTPN20-208ENST00000395727 RARRES1P49788 294 aa6.81□□□□□ -1.32
PTPN20-208ENST00000395727 GATMP50440 423 aa6.81□□□□□ -1.32
PTPN20-208ENST00000395727 NPEPPSP55786 919 aa6.81□□□□□ -1.32
PTPN20-208ENST00000395727 ZP2Q05996 745 aa6.81□□□□□ -1.32
PTPN20-208ENST00000395727 PCDH1Q08174 1060 aa6.81□□□□□ -1.32
PTPN20-208ENST00000395727 LAMTOR4Q0VGL1 99 aa6.81□□□□□ -1.32
PTPN20-208ENST00000395727 SMAD4Q13485 552 aaKnown RBP6.81□□□□□ -1.32
PTPN20-208ENST00000395727 EMC2Q15006 297 aa6.81□□□□□ -1.32
PTPN20-208ENST00000395727 ZNF423Q2M1K9 1284 aa6.81□□□□□ -1.32
PTPN20-208ENST00000395727 PLA2G4EQ3MJ16 856 aa6.81□□□□□ -1.32
PTPN20-208ENST00000395727 FOXD4L6Q3SYB3 417 aaPredicted RBP6.81□□□□□ -1.32
PTPN20-208ENST00000395727 RPS26P11Q5JNZ5 115 aaPredicted RBP6.81□□□□□ -1.32
PTPN20-208ENST00000395727 PLA2G4FQ68DD2 849 aa6.81□□□□□ -1.32
PTPN20-208ENST00000395727 NCAPH2Q6IBW4 605 aa6.81□□□□□ -1.32
PTPN20-208ENST00000395727 KCNT2Q6UVM3 1135 aa6.81□□□□□ -1.32
PTPN20-208ENST00000395727 SHISA2Q6UWI4 295 aa6.81□□□□□ -1.32
PTPN20-208ENST00000395727 FOXD4L3Q6VB84 417 aaPredicted RBP6.81□□□□□ -1.32
PTPN20-208ENST00000395727 MRPL10Q7Z7H8 261 aaKnown RBP6.81□□□□□ -1.32
PTPN20-208ENST00000395727 ABI1Q8IZP0 508 aa6.81□□□□□ -1.32
PTPN20-208ENST00000395727 SLC39A11Q8N1S5 342 aa6.81□□□□□ -1.32
PTPN20-208ENST00000395727 SMRP1Q8NCR6 262 aa6.81□□□□□ -1.32
PTPN20-208ENST00000395727 C3orf58Q8NDZ4 430 aa6.81□□□□□ -1.32
PTPN20-208ENST00000395727 CNNM3Q8NE01 707 aa6.81□□□□□ -1.32
PTPN20-208ENST00000395727 MRPS27Q92552 414 aaKnown RBP6.81□□□□□ -1.32
PTPN20-208ENST00000395727 PGBD4Q96DM1 585 aa6.81□□□□□ -1.32
PTPN20-208ENST00000395727 KLHDC7BQ96G42 594 aa6.81□□□□□ -1.32
PTPN20-208ENST00000395727 DYDC2Q96IM9 177 aa6.81□□□□□ -1.32
PTPN20-208ENST00000395727 SCLT1Q96NL6 688 aa6.81□□□□□ -1.32
PTPN20-208ENST00000395727 NACC1Q96RE7 527 aa6.81□□□□□ -1.32
PTPN20-208ENST00000395727 PPP1R16BQ96T49 567 aa6.81□□□□□ -1.32
PTPN20-208ENST00000395727 DUSP9Q99956 384 aaKnown RBP6.81□□□□□ -1.32
PTPN20-208ENST00000395727 EIF2AK1Q9BQI3 630 aaKnown RBP6.81□□□□□ -1.32
PTPN20-208ENST00000395727 SOX17Q9H6I2 414 aaPredicted RBP6.81□□□□□ -1.32
PTPN20-208ENST00000395727 TUFT1Q9NNX1 390 aa6.81□□□□□ -1.32
PTPN20-208ENST00000395727 XPNPEP1Q9NQW7 623 aa6.81□□□□□ -1.32
PTPN20-208ENST00000395727 FAM105AQ9NUU6 356 aa6.81□□□□□ -1.32
PTPN20-208ENST00000395727 TYW1Q9NV66 732 aaKnown RBP6.81□□□□□ -1.32
PTPN20-208ENST00000395727 CLDND1Q9NY35 253 aa6.81□□□□□ -1.32
PTPN20-208ENST00000395727 RGL1Q9NZL6 768 aa6.81□□□□□ -1.32
PTPN20-208ENST00000395727 DBR1Q9UK59 544 aaKnown RBP6.81□□□□□ -1.32
PTPN20-208ENST00000395727 VCANP13611 3396 aa6.8□□□□□ -1.32
PTPN20-208ENST00000395727 C1QTNF9BB2RNN3 333 aa6.8□□□□□ -1.32
PTPN20-208ENST00000395727 C9orf172C9J069 976 aa6.8□□□□□ -1.32
PTPN20-208ENST00000395727 PI4K2BG5E9Z4 385 aa6.8□□□□□ -1.32
PTPN20-208ENST00000395727 LAD1O00515 517 aa6.8□□□□□ -1.32
PTPN20-208ENST00000395727 MARCH6O60337 910 aa6.8□□□□□ -1.32
PTPN20-208ENST00000395727 GLP2RO95838 553 aa6.8□□□□□ -1.32
PTPN20-208ENST00000395727 B3GALT4O96024 378 aa6.8□□□□□ -1.32
PTPN20-208ENST00000395727 SRGAP2BP0DMP2 458 aa6.8□□□□□ -1.32
PTPN20-208ENST00000395727 IL9P15248 144 aa6.8□□□□□ -1.32
PTPN20-208ENST00000395727 RPA1P27694 616 aa6.8□□□□□ -1.32
PTPN20-208ENST00000395727 HOXA11P31270 313 aaPredicted RBP6.8□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms