RNA–Protein interactions for RNA: ENST00000395577.2

CDKN3-203, Transcript of cyclin dependent kinase inhibitor 3, humanhuman

TSL 5 BASIC

Gene CDKN3, Length 637 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN3-203ENST00000395577 CD320Q9NPF0 282 aa6.83□□□□□ -1.32
CDKN3-203ENST00000395577 SACM1LQ9NTJ5 587 aa6.83□□□□□ -1.32
CDKN3-203ENST00000395577 GPRC5BQ9NZH0 403 aa6.83□□□□□ -1.32
CDKN3-203ENST00000395577 SLC23A1Q9UHI7 598 aa6.83□□□□□ -1.32
CDKN3-203ENST00000395577 ZDHHC8Q9ULC8 765 aa6.83□□□□□ -1.32
CDKN3-203ENST00000395577 PADI4Q9UM07 663 aa6.83□□□□□ -1.32
CDKN3-203ENST00000395577 SLC4A7Q9Y6M7 1214 aa6.83□□□□□ -1.32
CDKN3-203ENST00000395577 TCRBV7S2A1N4TA0A589 114 aa6.82□□□□□ -1.32
CDKN3-203ENST00000395577 KLRG2A4D1S0 409 aaPredicted RBP6.82□□□□□ -1.32
CDKN3-203ENST00000395577 CXorf49A8MYA2 514 aaPredicted RBP6.82□□□□□ -1.32
CDKN3-203ENST00000395577 KIAA0391O15091 583 aaKnown RBP6.82□□□□□ -1.32
CDKN3-203ENST00000395577 SLC26A4O43511 780 aa6.82□□□□□ -1.32
CDKN3-203ENST00000395577 B4GALT4O60513 344 aa6.82□□□□□ -1.32
CDKN3-203ENST00000395577 MATN4O95460 622 aa6.82□□□□□ -1.32
CDKN3-203ENST00000395577 PARP1P09874 1014 aaKnown RBP6.82□□□□□ -1.32
CDKN3-203ENST00000395577 ABCB4P21439 1286 aa6.82□□□□□ -1.32
CDKN3-203ENST00000395577 LINC00310P59036 64 aa6.82□□□□□ -1.32
CDKN3-203ENST00000395577 RIN1Q13671 783 aa6.82□□□□□ -1.32
CDKN3-203ENST00000395577 EMC10Q5UCC4 262 aa6.82□□□□□ -1.32
CDKN3-203ENST00000395577 FAM124AQ86V42 546 aa6.82□□□□□ -1.32
CDKN3-203ENST00000395577 LINC01356Q8N9X3 169 aa6.82□□□□□ -1.32
CDKN3-203ENST00000395577 TP53I13Q8NBR0 393 aaPredicted RBP6.82□□□□□ -1.32
CDKN3-203ENST00000395577 IL17RDQ8NFM7 739 aa6.82□□□□□ -1.32
CDKN3-203ENST00000395577 KIAA1191Q96A73 305 aa6.82□□□□□ -1.32
CDKN3-203ENST00000395577 ARL8AQ96BM9 186 aa6.82□□□□□ -1.32
CDKN3-203ENST00000395577 SLC38A3Q99624 504 aa6.82□□□□□ -1.32
CDKN3-203ENST00000395577 CRB3Q9BUF7 120 aa6.82□□□□□ -1.32
CDKN3-203ENST00000395577 PACSIN1Q9BY11 444 aa6.82□□□□□ -1.32
CDKN3-203ENST00000395577 TRIM54Q9BYV2 358 aa6.82□□□□□ -1.32
CDKN3-203ENST00000395577 WDR12Q9GZL7 423 aaKnown RBP6.82□□□□□ -1.32
CDKN3-203ENST00000395577 C12orf65Q9H3J6 166 aaKnown RBP6.82□□□□□ -1.32
CDKN3-203ENST00000395577 STK32BQ9NY57 414 aa6.82□□□□□ -1.32
CDKN3-203ENST00000395577 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP6.82□□□□□ -1.32
CDKN3-203ENST00000395577 KDM6BO15054 1643 aa6.82□□□□□ -1.32
CDKN3-203ENST00000395577 GLI2P10070 1586 aa6.82□□□□□ -1.32
CDKN3-203ENST00000395577 PMS2P1A4D2B8 440 aa6.81□□□□□ -1.32
CDKN3-203ENST00000395577 F8W8V4 182 aa6.81□□□□□ -1.32
CDKN3-203ENST00000395577 TSHRP16473 764 aa6.81□□□□□ -1.32
CDKN3-203ENST00000395577 PHKA1P46020 1223 aa6.81□□□□□ -1.32
CDKN3-203ENST00000395577 ARFIP2P53365 341 aa6.81□□□□□ -1.32
CDKN3-203ENST00000395577 NOMO3P69849 1222 aa6.81□□□□□ -1.32
CDKN3-203ENST00000395577 KIAA2012Q0VF49 1180 aa6.81□□□□□ -1.32
CDKN3-203ENST00000395577 KCNA10Q16322 511 aa6.81□□□□□ -1.32
CDKN3-203ENST00000395577 C3orf38Q5JPI3 329 aa6.81□□□□□ -1.32
CDKN3-203ENST00000395577 ZNF529Q6P280 563 aa6.81□□□□□ -1.32
CDKN3-203ENST00000395577 ZNF783Q6ZMS7 281 aa6.81□□□□□ -1.32
CDKN3-203ENST00000395577 SHCBP1Q8NEM2 672 aa6.81□□□□□ -1.32
CDKN3-203ENST00000395577 OR6B3Q8NGW1 331 aa6.81□□□□□ -1.32
CDKN3-203ENST00000395577 SLC35B2Q8TB61 432 aa6.81□□□□□ -1.32
CDKN3-203ENST00000395577 MSLNLQ96KJ4 702 aa6.81□□□□□ -1.32
CDKN3-203ENST00000395577 TCF25Q9BQ70 676 aa6.81□□□□□ -1.32
CDKN3-203ENST00000395577 AFF4Q9UHB7 1163 aaKnown RBP6.81□□□□□ -1.32
CDKN3-203ENST00000395577 CDC23Q9UJX2 597 aa6.81□□□□□ -1.32
CDKN3-203ENST00000395577 A0A1W2PRX2 142 aa6.8□□□□□ -1.32
CDKN3-203ENST00000395577 MATN2O00339 956 aa6.8□□□□□ -1.32
CDKN3-203ENST00000395577 TBC1D4O60343 1298 aa6.8□□□□□ -1.32
CDKN3-203ENST00000395577 SLC43A1O75387 559 aa6.8□□□□□ -1.32
CDKN3-203ENST00000395577 SNRPA1P09661 255 aaKnown RBP6.8□□□□□ -1.32
CDKN3-203ENST00000395577 PPM1AP35813 382 aa6.8□□□□□ -1.32
CDKN3-203ENST00000395577 RAC3P60763 192 aa6.8□□□□□ -1.32
CDKN3-203ENST00000395577 TRIM14Q14142 442 aa6.8□□□□□ -1.32
CDKN3-203ENST00000395577 HABP2Q14520 560 aaPredicted RBP6.8□□□□□ -1.32
CDKN3-203ENST00000395577 HIBCHQ6NVY1 386 aaPredicted RBP6.8□□□□□ -1.32
CDKN3-203ENST00000395577 UBE3BQ7Z3V4 1068 aa6.8□□□□□ -1.32
CDKN3-203ENST00000395577 FRMD5Q7Z6J6 570 aa6.8□□□□□ -1.32
CDKN3-203ENST00000395577 TMEM151BQ8IW70 566 aa6.8□□□□□ -1.32
CDKN3-203ENST00000395577 RNF152Q8N8N0 203 aa6.8□□□□□ -1.32
CDKN3-203ENST00000395577 ANKRD42Q8N9B4 389 aa6.8□□□□□ -1.32
CDKN3-203ENST00000395577 PCSK9Q8NBP7 692 aaKnown RBP6.8□□□□□ -1.32
CDKN3-203ENST00000395577 NLGN4YQ8NFZ3 816 aaPredicted RBP6.8□□□□□ -1.32
CDKN3-203ENST00000395577 BRI3BPQ8WY22 251 aa6.8□□□□□ -1.32
CDKN3-203ENST00000395577 NMD3Q96D46 503 aaKnown RBP6.8□□□□□ -1.32
CDKN3-203ENST00000395577 ZC3H10Q96K80 434 aaKnown RBP6.8□□□□□ -1.32
CDKN3-203ENST00000395577 HERPUD2Q9BSE4 406 aa6.8□□□□□ -1.32
CDKN3-203ENST00000395577 NDC1Q9BTX1 674 aa6.8□□□□□ -1.32
CDKN3-203ENST00000395577 BRD9Q9H8M2 597 aa6.8□□□□□ -1.32
CDKN3-203ENST00000395577 ST6GALNAC1Q9NSC7 600 aaPredicted RBP6.8□□□□□ -1.32
CDKN3-203ENST00000395577 COL20A1Q9P218 1284 aa6.8□□□□□ -1.32
CDKN3-203ENST00000395577 CFAP97Q9P2B7 532 aa6.8□□□□□ -1.32
CDKN3-203ENST00000395577 MED16Q9Y2X0 877 aa6.8□□□□□ -1.32
CDKN3-203ENST00000395577 UHRF1BP1LA0JNW5 1464 aa6.79□□□□□ -1.32
CDKN3-203ENST00000395577 PRSS29PA6NIE9 313 aa6.79□□□□□ -1.32
CDKN3-203ENST00000395577 B5MCH6 92 aa6.79□□□□□ -1.32
CDKN3-203ENST00000395577 NPIPB6E9PJ23 425 aa6.79□□□□□ -1.32
CDKN3-203ENST00000395577 BTN3A1O00481 513 aa6.79□□□□□ -1.32
CDKN3-203ENST00000395577 APOL1O14791 398 aa6.79□□□□□ -1.32
CDKN3-203ENST00000395577 PJA2O43164 708 aa6.79□□□□□ -1.32
CDKN3-203ENST00000395577 HOXA3O43365 443 aaPredicted RBP6.79□□□□□ -1.32
CDKN3-203ENST00000395577 NBNO60934 754 aa6.79□□□□□ -1.32
CDKN3-203ENST00000395577 STC2O76061 302 aa6.79□□□□□ -1.32
CDKN3-203ENST00000395577 GJB1P08034 283 aa6.79□□□□□ -1.32
CDKN3-203ENST00000395577 IL6STP40189 918 aaPredicted RBP6.79□□□□□ -1.32
CDKN3-203ENST00000395577 HALP42357 657 aa6.79□□□□□ -1.32
CDKN3-203ENST00000395577 MAPK10P53779 464 aa6.79□□□□□ -1.32
CDKN3-203ENST00000395577 SLURP1P55000 103 aa6.79□□□□□ -1.32
CDKN3-203ENST00000395577 CLRN1P58418 232 aa6.79□□□□□ -1.32
CDKN3-203ENST00000395577 RAP2BP61225 183 aa6.79□□□□□ -1.32
CDKN3-203ENST00000395577 TNFAIP2Q03169 654 aa6.79□□□□□ -1.32
CDKN3-203ENST00000395577 KIF22Q14807 665 aa6.79□□□□□ -1.32
CDKN3-203ENST00000395577 FAM214AQ32MH5 1076 aa6.79□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms