RNA–Protein interactions for RNA: ENST00000395246.5

CDC42SE2-202, Transcript of CDC42 small effector 2, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CDC42SE2, Length 3,485 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2-202ENST00000395246 KIAA1257Q9ULG3 409 aa15.2■□□□□ 0.02
CDC42SE2-202ENST00000395246 BUB1BO60566 1050 aaPredicted RBP15.19■□□□□ 0.02
CDC42SE2-202ENST00000395246 MMP8P22894 467 aa15.19■□□□□ 0.02
CDC42SE2-202ENST00000395246 YWHAEP62258 255 aaKnown RBP15.19■□□□□ 0.02
CDC42SE2-202ENST00000395246 MFSD10Q14728 455 aa15.19■□□□□ 0.02
CDC42SE2-202ENST00000395246 PKDCCQ504Y2 493 aa15.19■□□□□ 0.02
CDC42SE2-202ENST00000395246 WDR44Q5JSH3 913 aa15.19■□□□□ 0.02
CDC42SE2-202ENST00000395246 UBXN11Q5T124 520 aa15.19■□□□□ 0.02
CDC42SE2-202ENST00000395246 TLK2Q86UE8 772 aa15.19■□□□□ 0.02
CDC42SE2-202ENST00000395246 LRRC71Q8N4P6 559 aa15.19■□□□□ 0.02
CDC42SE2-202ENST00000395246 LRRC52Q8N7C0 313 aa15.19■□□□□ 0.02
CDC42SE2-202ENST00000395246 SLC43A3Q8NBI5 491 aa15.19■□□□□ 0.02
CDC42SE2-202ENST00000395246 FNBP1Q96RU3 617 aa15.19■□□□□ 0.02
CDC42SE2-202ENST00000395246 SLITRK6Q9H5Y7 841 aa15.19■□□□□ 0.02
CDC42SE2-202ENST00000395246 TRIP11Q15643 1979 aa15.19■□□□□ 0.02
CDC42SE2-202ENST00000395246 ENC1O14682 589 aa15.19■□□□□ 0.02
CDC42SE2-202ENST00000395246 FTLP02792 175 aaPredicted RBP15.19■□□□□ 0.02
CDC42SE2-202ENST00000395246 PSEN2P49810 448 aa15.19■□□□□ 0.02
CDC42SE2-202ENST00000395246 CRYBB1P53674 252 aaPredicted RBP15.19■□□□□ 0.02
CDC42SE2-202ENST00000395246 SIX1Q15475 284 aaPredicted RBP15.19■□□□□ 0.02
CDC42SE2-202ENST00000395246 LRRC38Q5VT99 294 aa15.19■□□□□ 0.02
CDC42SE2-202ENST00000395246 APBB1IPQ7Z5R6 666 aaPredicted RBP15.19■□□□□ 0.02
CDC42SE2-202ENST00000395246 U2AF1L4Q8WU68 220 aaKnown RBP15.19■□□□□ 0.02
CDC42SE2-202ENST00000395246 CTNNBL1Q8WYA6 563 aaPredicted RBP15.19■□□□□ 0.02
CDC42SE2-202ENST00000395246 TSC1Q92574 1164 aa15.19■□□□□ 0.02
CDC42SE2-202ENST00000395246 BICD1Q96G01 975 aa15.19■□□□□ 0.02
CDC42SE2-202ENST00000395246 TRPC6Q9Y210 931 aa15.19■□□□□ 0.02
CDC42SE2-202ENST00000395246 PLXNA3P51805 1871 aa15.19■□□□□ 0.02
CDC42SE2-202ENST00000395246 PAX3P23760 479 aa15.19■□□□□ 0.02
CDC42SE2-202ENST00000395246 ZNF157P51786 506 aaPredicted RBP15.19■□□□□ 0.02
CDC42SE2-202ENST00000395246 CLCN3P51790 818 aa15.19■□□□□ 0.02
CDC42SE2-202ENST00000395246 EEPD1Q7L9B9 569 aa15.19■□□□□ 0.02
CDC42SE2-202ENST00000395246 C1orf127Q8N9H9 656 aa15.19■□□□□ 0.02
CDC42SE2-202ENST00000395246 ZSWIM1Q9BR11 485 aa15.19■□□□□ 0.02
CDC42SE2-202ENST00000395246 SEZ6LQ9BYH1 1024 aa15.19■□□□□ 0.02
CDC42SE2-202ENST00000395246 CYLDQ9NQC7 956 aa15.19■□□□□ 0.02
CDC42SE2-202ENST00000395246 B4GALT5O43286 388 aa15.18■□□□□ 0.02
CDC42SE2-202ENST00000395246 AKR1A1P14550 325 aa15.18■□□□□ 0.02
CDC42SE2-202ENST00000395246 PIK3CAP42336 1068 aa15.18■□□□□ 0.02
CDC42SE2-202ENST00000395246 TAP1Q03518 808 aa15.18■□□□□ 0.02
CDC42SE2-202ENST00000395246 CRHR2Q13324 411 aa15.18■□□□□ 0.02
CDC42SE2-202ENST00000395246 CCNI2Q6ZMN8 369 aaPredicted RBP15.18■□□□□ 0.02
CDC42SE2-202ENST00000395246 VSIG1Q86XK7 387 aa15.18■□□□□ 0.02
CDC42SE2-202ENST00000395246 TRAPPC12Q8WVT3 735 aa15.18■□□□□ 0.02
CDC42SE2-202ENST00000395246 ARGLU1Q9NWB6 273 aaPredicted RBP15.18■□□□□ 0.02
CDC42SE2-202ENST00000395246 GDAP2Q9NXN4 497 aa15.18■□□□□ 0.02
CDC42SE2-202ENST00000395246 LTBP2Q14767 1821 aa15.18■□□□□ 0.02
CDC42SE2-202ENST00000395246 COL4A6Q14031 1691 aa15.18■□□□□ 0.02
CDC42SE2-202ENST00000395246 ZNF185O15231 689 aa15.18■□□□□ 0.02
CDC42SE2-202ENST00000395246 SCNN1AP37088 669 aa15.18■□□□□ 0.02
CDC42SE2-202ENST00000395246 METTL13Q8N6R0 699 aa15.18■□□□□ 0.02
CDC42SE2-202ENST00000395246 SMC1BQ8NDV3 1235 aa15.18■□□□□ 0.02
CDC42SE2-202ENST00000395246 INO80BQ9C086 356 aaPredicted RBP15.18■□□□□ 0.02
CDC42SE2-202ENST00000395246 GTF2IRD1Q9UHL9 959 aa15.18■□□□□ 0.02
CDC42SE2-202ENST00000395246 A0A087WZ62 844 aa15.18■□□□□ 0.02
CDC42SE2-202ENST00000395246 CILPO75339 1184 aa15.18■□□□□ 0.02
CDC42SE2-202ENST00000395246 ZNF286BP0CG31 522 aa15.18■□□□□ 0.02
CDC42SE2-202ENST00000395246 STAG3L1P0CL83 205 aa15.18■□□□□ 0.02
CDC42SE2-202ENST00000395246 EMC10Q5UCC4 262 aa15.18■□□□□ 0.02
CDC42SE2-202ENST00000395246 SLC27A1Q6PCB7 646 aa15.18■□□□□ 0.02
CDC42SE2-202ENST00000395246 FDXACB1Q9BRP7 624 aaPredicted RBP15.18■□□□□ 0.02
CDC42SE2-202ENST00000395246 ECHS1P30084 290 aa15.17■□□□□ 0.02
CDC42SE2-202ENST00000395246 TAF1CQ15572 869 aaPredicted RBP15.17■□□□□ 0.02
CDC42SE2-202ENST00000395246 MRPL10Q7Z7H8 261 aaKnown RBP15.17■□□□□ 0.02
CDC42SE2-202ENST00000395246 WDTC1Q8N5D0 677 aa15.17■□□□□ 0.02
CDC42SE2-202ENST00000395246 CHST12Q9NRB3 414 aa15.17■□□□□ 0.02
CDC42SE2-202ENST00000395246 PCYOX1Q9UHG3 505 aa15.17■□□□□ 0.02
CDC42SE2-202ENST00000395246 CCDC66A2RUB6 948 aa15.17■□□□□ 0.02
CDC42SE2-202ENST00000395246 PIRO00625 290 aa15.17■□□□□ 0.02
CDC42SE2-202ENST00000395246 SRGAP2O75044 1071 aa15.17■□□□□ 0.02
CDC42SE2-202ENST00000395246 LACTBP83111 547 aaPredicted RBP15.17■□□□□ 0.02
CDC42SE2-202ENST00000395246 SP4Q02446 784 aa15.17■□□□□ 0.02
CDC42SE2-202ENST00000395246 RPS6KA1Q15418 735 aa15.17■□□□□ 0.02
CDC42SE2-202ENST00000395246 TAF2Q6P1X5 1199 aa15.17■□□□□ 0.02
CDC42SE2-202ENST00000395246 CCDC127Q96BQ5 260 aa15.17■□□□□ 0.02
CDC42SE2-202ENST00000395246 RUNDC3BQ96NL0 473 aa15.17■□□□□ 0.02
CDC42SE2-202ENST00000395246 OSGEPQ9NPF4 335 aa15.17■□□□□ 0.02
CDC42SE2-202ENST00000395246 CPA4Q9UI42 421 aa15.17■□□□□ 0.02
CDC42SE2-202ENST00000395246 KIAA1671Q9BY89 1806 aa15.16■□□□□ 0.02
CDC42SE2-202ENST00000395246 LRPAP1P30533 357 aa15.16■□□□□ 0.02
CDC42SE2-202ENST00000395246 ZNF568Q3ZCX4 644 aa15.16■□□□□ 0.02
CDC42SE2-202ENST00000395246 PPM1KQ8N3J5 372 aa15.16■□□□□ 0.02
CDC42SE2-202ENST00000395246 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP15.16■□□□□ 0.02
CDC42SE2-202ENST00000395246 TXLNGYQ9BZA5 131 aa15.16■□□□□ 0.02
CDC42SE2-202ENST00000395246 ANKRD36BP1Q96IX9 119 aa15.16■□□□□ 0.02
CDC42SE2-202ENST00000395246 LACTBL1A8MY62 500 aa15.16■□□□□ 0.02
CDC42SE2-202ENST00000395246 PSTPIP1O43586 416 aa15.16■□□□□ 0.02
CDC42SE2-202ENST00000395246 MARK3P27448 753 aa15.16■□□□□ 0.02
CDC42SE2-202ENST00000395246 TRIP12Q14669 1992 aaPredicted RBP15.16■□□□□ 0.02
CDC42SE2-202ENST00000395246 SCARA3Q6AZY7 606 aa15.16■□□□□ 0.02
CDC42SE2-202ENST00000395246 FAM71BQ8TC56 605 aa15.16■□□□□ 0.02
CDC42SE2-202ENST00000395246 ARID3AQ99856 593 aa15.16■□□□□ 0.02
CDC42SE2-202ENST00000395246 RPF1Q9H9Y2 349 aaKnown RBP15.16■□□□□ 0.02
CDC42SE2-202ENST00000395246 AMFRQ9UKV5 643 aa15.16■□□□□ 0.02
CDC42SE2-202ENST00000395246 TMEM88BA6NKF7 163 aa15.15■□□□□ 0.02
CDC42SE2-202ENST00000395246 ZNF487B1APH4 448 aa15.15■□□□□ 0.02
CDC42SE2-202ENST00000395246 BUB1O43683 1085 aa15.15■□□□□ 0.02
CDC42SE2-202ENST00000395246 TFRCP02786 760 aaKnown RBP15.15■□□□□ 0.02
CDC42SE2-202ENST00000395246 ACAP1Q15027 740 aa15.15■□□□□ 0.02
CDC42SE2-202ENST00000395246 ARHGAP44Q17R89 818 aa15.15■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms