RNA–Protein interactions for RNA: ENST00000395198.7

HERC4-204, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HERC4, Length 4,445 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-204ENST00000395198 FAM83CQ9BQN1 747 aa4.54□□□□□ -1.68
HERC4-204ENST00000395198 CCSER1Q9C0I3 900 aa4.54□□□□□ -1.68
HERC4-204ENST00000395198 REXO4Q9GZR2 422 aaKnown RBP4.54□□□□□ -1.68
HERC4-204ENST00000395198 USP40Q9NVE5 1235 aa4.54□□□□□ -1.68
HERC4-204ENST00000395198 MOSPD1Q9UJG1 213 aa4.54□□□□□ -1.68
HERC4-204ENST00000395198 CPSF3Q9UKF6 684 aaKnown RBP4.54□□□□□ -1.68
HERC4-204ENST00000395198 TMPRSS11EQ9UL52 423 aa4.54□□□□□ -1.68
HERC4-204ENST00000395198 TTC7AQ9ULT0 858 aaPredicted RBP4.54□□□□□ -1.68
HERC4-204ENST00000395198 PI4KAP2A4QPH2 592 aa4.54□□□□□ -1.68
HERC4-204ENST00000395198 A6NHS1 94 aa4.54□□□□□ -1.68
HERC4-204ENST00000395198 EBAG9O00559 213 aa4.54□□□□□ -1.68
HERC4-204ENST00000395198 TP73O15350 636 aa4.54□□□□□ -1.68
HERC4-204ENST00000395198 SURF6O75683 361 aaKnown RBP4.54□□□□□ -1.68
HERC4-204ENST00000395198 TUBB4AP04350 444 aa4.54□□□□□ -1.68
HERC4-204ENST00000395198 ACADSBP45954 432 aa4.54□□□□□ -1.68
HERC4-204ENST00000395198 OXCT1P55809 520 aa4.54□□□□□ -1.68
HERC4-204ENST00000395198 RAC3P60763 192 aa4.54□□□□□ -1.68
HERC4-204ENST00000395198 ACTR1AP61163 376 aa4.54□□□□□ -1.68
HERC4-204ENST00000395198 ATAT1Q5SQI0 421 aa4.54□□□□□ -1.68
HERC4-204ENST00000395198 SLC25A24Q6NUK1 477 aa4.54□□□□□ -1.68
HERC4-204ENST00000395198 OLFM4Q6UX06 510 aa4.54□□□□□ -1.68
HERC4-204ENST00000395198 CHD1LQ86WJ1 897 aa4.54□□□□□ -1.68
HERC4-204ENST00000395198 CRACR2BQ8N4Y2 399 aaPredicted RBP4.54□□□□□ -1.68
HERC4-204ENST00000395198 GDAP1Q8TB36 358 aa4.54□□□□□ -1.68
HERC4-204ENST00000395198 GATAD2BQ8WXI9 593 aa4.54□□□□□ -1.68
HERC4-204ENST00000395198 EDC3Q96F86 508 aaKnown RBP4.54□□□□□ -1.68
HERC4-204ENST00000395198 SNX27Q96L92 541 aa4.54□□□□□ -1.68
HERC4-204ENST00000395198 RUFY1Q96T51 708 aa4.54□□□□□ -1.68
HERC4-204ENST00000395198 PKP4Q99569 1192 aa4.54□□□□□ -1.68
HERC4-204ENST00000395198 ADAM19Q9H013 955 aa4.54□□□□□ -1.68
HERC4-204ENST00000395198 INTS2Q9H0H0 1204 aaKnown RBP4.54□□□□□ -1.68
HERC4-204ENST00000395198 SYNDIG1Q9H7V2 258 aa4.54□□□□□ -1.68
HERC4-204ENST00000395198 KIF9Q9HAQ2 790 aa4.54□□□□□ -1.68
HERC4-204ENST00000395198 DMRT3Q9NQL9 472 aa4.54□□□□□ -1.68
HERC4-204ENST00000395198 ASNSD1Q9NWL6 643 aa4.54□□□□□ -1.68
HERC4-204ENST00000395198 ORC3Q9UBD5 711 aaPredicted RBP4.54□□□□□ -1.68
HERC4-204ENST00000395198 SRP68Q9UHB9 627 aaKnown RBP4.54□□□□□ -1.68
HERC4-204ENST00000395198 MBD1Q9UIS9 605 aaPredicted RBP4.54□□□□□ -1.68
HERC4-204ENST00000395198 CNOT6Q9ULM6 557 aaKnown RBP4.54□□□□□ -1.68
HERC4-204ENST00000395198 NAALAD2Q9Y3Q0 740 aa4.54□□□□□ -1.68
HERC4-204ENST00000395198 KIF15Q9NS87 1388 aa4.53□□□□□ -1.68
HERC4-204ENST00000395198 hCG_1807616A0A1W2PRN6 198 aa4.53□□□□□ -1.68
HERC4-204ENST00000395198 ABCB7O75027 752 aa4.53□□□□□ -1.68
HERC4-204ENST00000395198 PABPC4LP0CB38 370 aaKnown RBP4.53□□□□□ -1.68
HERC4-204ENST00000395198 PNMA6AP0CW24 399 aaPredicted RBP4.53□□□□□ -1.68
HERC4-204ENST00000395198 BPIP17213 487 aa4.53□□□□□ -1.68
HERC4-204ENST00000395198 MSNP26038 577 aaKnown RBP4.53□□□□□ -1.68
HERC4-204ENST00000395198 CCR5P51681 352 aa4.53□□□□□ -1.68
HERC4-204ENST00000395198 CUL4BQ13620 913 aa4.53□□□□□ -1.68
HERC4-204ENST00000395198 STK38Q15208 465 aa4.53□□□□□ -1.68
HERC4-204ENST00000395198 LRIT3Q3SXY7 679 aa4.53□□□□□ -1.68
HERC4-204ENST00000395198 IFIT1BQ5T764 474 aaKnown RBP4.53□□□□□ -1.68
HERC4-204ENST00000395198 RNASEH2BQ5TBB1 312 aaKnown RBP4.53□□□□□ -1.68
HERC4-204ENST00000395198 ARL14Q8N4G2 192 aa4.53□□□□□ -1.68
HERC4-204ENST00000395198 SHCBP1Q8NEM2 672 aa4.53□□□□□ -1.68
HERC4-204ENST00000395198 POC1BQ8TC44 478 aa4.53□□□□□ -1.68
HERC4-204ENST00000395198 GANCQ8TET4 914 aa4.53□□□□□ -1.68
HERC4-204ENST00000395198 C18orf8Q96DM3 657 aa4.53□□□□□ -1.68
HERC4-204ENST00000395198 HES6Q96HZ4 224 aa4.53□□□□□ -1.68
HERC4-204ENST00000395198 LPIN3Q9BQK8 851 aa4.53□□□□□ -1.68
HERC4-204ENST00000395198 MOV10L1Q9BXT6 1211 aaKnown RBP4.53□□□□□ -1.68
HERC4-204ENST00000395198 PACSIN1Q9BY11 444 aa4.53□□□□□ -1.68
HERC4-204ENST00000395198 PARD6BQ9BYG5 372 aa4.53□□□□□ -1.68
HERC4-204ENST00000395198 FAM129AQ9BZQ8 928 aa4.53□□□□□ -1.68
HERC4-204ENST00000395198 IL37Q9NZH6 218 aa4.53□□□□□ -1.68
HERC4-204ENST00000395198 LRCH1Q9Y2L9 728 aa4.53□□□□□ -1.68
HERC4-204ENST00000395198 SPEF1Q9Y4P9 236 aa4.53□□□□□ -1.68
HERC4-204ENST00000395198 POGZQ7Z3K3 1410 aa4.53□□□□□ -1.68
HERC4-204ENST00000395198 UACAQ9BZF9 1416 aa4.53□□□□□ -1.68
HERC4-204ENST00000395198 ROCK2O75116 1388 aaKnown RBP4.53□□□□□ -1.68
HERC4-204ENST00000395198 ARHGAP5Q13017 1502 aa4.53□□□□□ -1.68
HERC4-204ENST00000395198 F5H0A9 414 aaPredicted RBP4.53□□□□□ -1.68
HERC4-204ENST00000395198 C3orf80F5H4A9 247 aa4.53□□□□□ -1.68
HERC4-204ENST00000395198 CDK2AP1O14519 115 aa4.53□□□□□ -1.68
HERC4-204ENST00000395198 ZFYP08048 801 aaPredicted RBP4.53□□□□□ -1.68
HERC4-204ENST00000395198 SRGAP2BP0DMP2 458 aa4.53□□□□□ -1.68
HERC4-204ENST00000395198 RFC1P35251 1148 aaPredicted RBP4.53□□□□□ -1.68
HERC4-204ENST00000395198 CBX5P45973 191 aa4.53□□□□□ -1.68
HERC4-204ENST00000395198 PCP4P48539 62 aa4.53□□□□□ -1.68
HERC4-204ENST00000395198 ADARP55265 1226 aaKnown RBP4.53□□□□□ -1.68
HERC4-204ENST00000395198 FAM189BP81408 668 aa4.53□□□□□ -1.68
HERC4-204ENST00000395198 MSLNQ13421 630 aaPredicted RBP4.53□□□□□ -1.68
HERC4-204ENST00000395198 PLCL1Q15111 1095 aa4.53□□□□□ -1.68
HERC4-204ENST00000395198 HSP90AA5PQ58FG0 334 aa4.53□□□□□ -1.68
HERC4-204ENST00000395198 COX20Q5RI15 118 aa4.53□□□□□ -1.68
HERC4-204ENST00000395198 NBPF12Q5TAG4 269 aaPredicted RBP4.53□□□□□ -1.68
HERC4-204ENST00000395198 RUFY4Q6ZNE9 571 aa4.53□□□□□ -1.68
HERC4-204ENST00000395198 SULF2Q8IWU5 870 aa4.53□□□□□ -1.68
HERC4-204ENST00000395198 CADM3Q8N126 398 aa4.53□□□□□ -1.68
HERC4-204ENST00000395198 CCDC150Q8NCX0 1101 aa4.53□□□□□ -1.68
HERC4-204ENST00000395198 FAM216AQ8WUB2 273 aa4.53□□□□□ -1.68
HERC4-204ENST00000395198 RBM41Q96IZ5 413 aaKnown RBP4.53□□□□□ -1.68
HERC4-204ENST00000395198 CDC6Q99741 560 aa4.53□□□□□ -1.68
HERC4-204ENST00000395198 KRT23Q9C075 422 aa4.53□□□□□ -1.68
HERC4-204ENST00000395198 NDST4Q9H3R1 872 aa4.53□□□□□ -1.68
HERC4-204ENST00000395198 C19orf44Q9H6X5 657 aa4.53□□□□□ -1.68
HERC4-204ENST00000395198 NRIP3Q9NQ35 241 aa4.53□□□□□ -1.68
HERC4-204ENST00000395198 CNOT11Q9UKZ1 510 aaKnown RBP4.53□□□□□ -1.68
HERC4-204ENST00000395198 PSME2Q9UL46 239 aa4.53□□□□□ -1.68
HERC4-204ENST00000395198 ATP23Q9Y6H3 246 aa4.53□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms