RNA–Protein interactions for RNA: ENST00000394961.6

SMARCAD1-203, Transcript of SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1, humanhuman

TSL 2

Gene SMARCAD1, Length 3,778 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAD1-203ENST00000394961 GJB4Q9NTQ9 266 aa6.81□□□□□ -1.32
SMARCAD1-203ENST00000394961 UBQLN1Q9UMX0 589 aaKnown RBP6.81□□□□□ -1.32
SMARCAD1-203ENST00000394961 CHURC1-FNTBB4DL54 471 aa6.81□□□□□ -1.32
SMARCAD1-203ENST00000394961 F8W810 466 aa6.81□□□□□ -1.32
SMARCAD1-203ENST00000394961 KIAA0391O15091 583 aaKnown RBP6.81□□□□□ -1.32
SMARCAD1-203ENST00000394961 JAK2O60674 1132 aa6.81□□□□□ -1.32
SMARCAD1-203ENST00000394961 VNN2O95498 520 aa6.81□□□□□ -1.32
SMARCAD1-203ENST00000394961 RHOP08100 348 aa6.81□□□□□ -1.32
SMARCAD1-203ENST00000394961 CCT6AP40227 531 aaKnown RBP6.81□□□□□ -1.32
SMARCAD1-203ENST00000394961 CLCNKBP51801 687 aa6.81□□□□□ -1.32
SMARCAD1-203ENST00000394961 GTF2BQ00403 316 aa6.81□□□□□ -1.32
SMARCAD1-203ENST00000394961 IL17AQ16552 155 aa6.81□□□□□ -1.32
SMARCAD1-203ENST00000394961 SPATA1Q5VX52 437 aa6.81□□□□□ -1.32
SMARCAD1-203ENST00000394961 GRASPQ7Z6J2 395 aaPredicted RBP6.81□□□□□ -1.32
SMARCAD1-203ENST00000394961 FEZF2Q8TBJ5 459 aa6.81□□□□□ -1.32
SMARCAD1-203ENST00000394961 IRF7Q92985 503 aa6.81□□□□□ -1.32
SMARCAD1-203ENST00000394961 PAAF1Q9BRP4 392 aa6.81□□□□□ -1.32
SMARCAD1-203ENST00000394961 SEL1LQ9UBV2 794 aa6.81□□□□□ -1.32
SMARCAD1-203ENST00000394961 FBXL5Q9UKA1 691 aa6.81□□□□□ -1.32
SMARCAD1-203ENST00000394961 MYBPHLA2RUH7 354 aa6.81□□□□□ -1.32
SMARCAD1-203ENST00000394961 RBAK-RBAKDNI3L0D1 243 aa6.81□□□□□ -1.32
SMARCAD1-203ENST00000394961 PIRO00625 290 aa6.81□□□□□ -1.32
SMARCAD1-203ENST00000394961 ADAM12O43184 909 aa6.81□□□□□ -1.32
SMARCAD1-203ENST00000394961 KINO60870 393 aaKnown RBP6.81□□□□□ -1.32
SMARCAD1-203ENST00000394961 HIP1RO75146 1068 aa6.81□□□□□ -1.32
SMARCAD1-203ENST00000394961 PPP1R37O75864 691 aa6.81□□□□□ -1.32
SMARCAD1-203ENST00000394961 WEE2P0C1S8 567 aa6.81□□□□□ -1.32
SMARCAD1-203ENST00000394961 TGM1P22735 817 aa6.81□□□□□ -1.32
SMARCAD1-203ENST00000394961 TKTP29401 623 aaKnown RBP6.81□□□□□ -1.32
SMARCAD1-203ENST00000394961 CCR3P51677 355 aa6.81□□□□□ -1.32
SMARCAD1-203ENST00000394961 MCCD1P59942 119 aaPredicted RBP6.81□□□□□ -1.32
SMARCAD1-203ENST00000394961 LMNB2Q03252 620 aa6.81□□□□□ -1.32
SMARCAD1-203ENST00000394961 SOX4Q06945 474 aaPredicted RBP6.81□□□□□ -1.32
SMARCAD1-203ENST00000394961 ALCAMQ13740 583 aa6.81□□□□□ -1.32
SMARCAD1-203ENST00000394961 SLC10A6Q3KNW5 377 aa6.81□□□□□ -1.32
SMARCAD1-203ENST00000394961 KRT79Q5XKE5 535 aa6.81□□□□□ -1.32
SMARCAD1-203ENST00000394961 GET4Q7L5D6 327 aaPredicted RBP6.81□□□□□ -1.32
SMARCAD1-203ENST00000394961 SMARCD2Q92925 531 aa6.81□□□□□ -1.32
SMARCAD1-203ENST00000394961 ABCB6Q9NP58 842 aa6.81□□□□□ -1.32
SMARCAD1-203ENST00000394961 TSHZ2Q9NRE2 1034 aa6.81□□□□□ -1.32
SMARCAD1-203ENST00000394961 MCM7P33993 719 aa6.8□□□□□ -1.32
SMARCAD1-203ENST00000394961 RABEP1Q15276 862 aa6.8□□□□□ -1.32
SMARCAD1-203ENST00000394961 ZBTB41Q5SVQ8 909 aa6.8□□□□□ -1.32
SMARCAD1-203ENST00000394961 RALGPS2Q86X27 583 aaPredicted RBP6.8□□□□□ -1.32
SMARCAD1-203ENST00000394961 SLC7A14Q8TBB6 771 aa6.8□□□□□ -1.32
SMARCAD1-203ENST00000394961 SECISBP2LQ93073 1101 aaKnown RBP6.8□□□□□ -1.32
SMARCAD1-203ENST00000394961 TRMT2BQ96GJ1 504 aaKnown RBP6.8□□□□□ -1.32
SMARCAD1-203ENST00000394961 ZMAT2Q96NC0 199 aaKnown RBP6.8□□□□□ -1.32
SMARCAD1-203ENST00000394961 FIZ1Q96SL8 496 aa6.8□□□□□ -1.32
SMARCAD1-203ENST00000394961 MKNK1Q9BUB5 465 aa6.8□□□□□ -1.32
SMARCAD1-203ENST00000394961 ZCWPW1Q9H0M4 648 aa6.8□□□□□ -1.32
SMARCAD1-203ENST00000394961 KMT5AQ9NQR1 393 aa6.8□□□□□ -1.32
SMARCAD1-203ENST00000394961 CPSF3Q9UKF6 684 aaKnown RBP6.8□□□□□ -1.32
SMARCAD1-203ENST00000394961 MUC3AQ02505 3323 aa6.8□□□□□ -1.32
SMARCAD1-203ENST00000394961 A0A0B4J269 797 aa6.8□□□□□ -1.32
SMARCAD1-203ENST00000394961 FRMD3A2A2Y4 597 aa6.8□□□□□ -1.32
SMARCAD1-203ENST00000394961 OR1D2P34982 312 aa6.8□□□□□ -1.32
SMARCAD1-203ENST00000394961 LONP1P36776 959 aaKnown RBP6.8□□□□□ -1.32
SMARCAD1-203ENST00000394961 ITFG1Q8TB96 612 aa6.8□□□□□ -1.32
SMARCAD1-203ENST00000394961 PSMG2Q969U7 264 aa6.8□□□□□ -1.32
SMARCAD1-203ENST00000394961 BHMT2Q9H2M3 363 aa6.8□□□□□ -1.32
SMARCAD1-203ENST00000394961 ZNF334Q9HCZ1 680 aaPredicted RBP6.8□□□□□ -1.32
SMARCAD1-203ENST00000394961 DDX19AQ9NUU7 478 aaKnown RBP6.8□□□□□ -1.32
SMARCAD1-203ENST00000394961 ZNF638Q14966 1978 aaKnown RBP6.8□□□□□ -1.32
SMARCAD1-203ENST00000394961 CASTOR2A6NHX0 329 aa6.8□□□□□ -1.32
SMARCAD1-203ENST00000394961 CFHP08603 1231 aa6.8□□□□□ -1.32
SMARCAD1-203ENST00000394961 C7P10643 843 aa6.8□□□□□ -1.32
SMARCAD1-203ENST00000394961 NEK4P51957 841 aa6.8□□□□□ -1.32
SMARCAD1-203ENST00000394961 SMTNP53814 917 aa6.8□□□□□ -1.32
SMARCAD1-203ENST00000394961 ZNF568Q3ZCX4 644 aa6.8□□□□□ -1.32
SMARCAD1-203ENST00000394961 POTEHQ6S545 545 aa6.8□□□□□ -1.32
SMARCAD1-203ENST00000394961 DTHD1Q6ZMT9 781 aa6.8□□□□□ -1.32
SMARCAD1-203ENST00000394961 BRAPQ7Z569 592 aa6.8□□□□□ -1.32
SMARCAD1-203ENST00000394961 PALB2Q86YC2 1186 aa6.8□□□□□ -1.32
SMARCAD1-203ENST00000394961 ELMOD1Q8N336 334 aa6.8□□□□□ -1.32
SMARCAD1-203ENST00000394961 NECAB1Q8N987 351 aa6.8□□□□□ -1.32
SMARCAD1-203ENST00000394961 RSAD2Q8WXG1 361 aa6.8□□□□□ -1.32
SMARCAD1-203ENST00000394961 FAM86C1Q9NVL1 165 aa6.8□□□□□ -1.32
SMARCAD1-203ENST00000394961 CDY1Q9Y6F8 540 aa6.8□□□□□ -1.32
SMARCAD1-203ENST00000394961 OGTO15294 1046 aa6.79□□□□□ -1.32
SMARCAD1-203ENST00000394961 NOL4O94818 638 aa6.79□□□□□ -1.32
SMARCAD1-203ENST00000394961 IL18RAPO95256 599 aa6.79□□□□□ -1.32
SMARCAD1-203ENST00000394961 LRG1P02750 347 aa6.79□□□□□ -1.32
SMARCAD1-203ENST00000394961 SSBP05455 408 aaKnown RBP eCLIP6.79□□□□□ -1.32
SMARCAD1-203ENST00000394961 CEBPBP17676 345 aa6.79□□□□□ -1.32
SMARCAD1-203ENST00000394961 PSMC3P17980 439 aa6.79□□□□□ -1.32
SMARCAD1-203ENST00000394961 SNRPFP62306 86 aaKnown RBP6.79□□□□□ -1.32
SMARCAD1-203ENST00000394961 ADCY1Q08828 1119 aa6.79□□□□□ -1.32
SMARCAD1-203ENST00000394961 SLC5A9Q2M3M2 681 aa6.79□□□□□ -1.32
SMARCAD1-203ENST00000394961 ARHGAP29Q52LW3 1261 aa6.79□□□□□ -1.32
SMARCAD1-203ENST00000394961 SLFN12LQ6IEE8 588 aa6.79□□□□□ -1.32
SMARCAD1-203ENST00000394961 VITQ6UXI7 678 aa6.79□□□□□ -1.32
SMARCAD1-203ENST00000394961 ITIH5Q86UX2 942 aa6.79□□□□□ -1.32
SMARCAD1-203ENST00000394961 SPEM1Q8N4L4 309 aa6.79□□□□□ -1.32
SMARCAD1-203ENST00000394961 SNX29Q8TEQ0 813 aa6.79□□□□□ -1.32
SMARCAD1-203ENST00000394961 RUSC1Q9BVN2 902 aa6.79□□□□□ -1.32
SMARCAD1-203ENST00000394961 STK17AQ9UEE5 414 aa6.79□□□□□ -1.32
SMARCAD1-203ENST00000394961 KIAA1024Q9UPX6 916 aa6.79□□□□□ -1.32
SMARCAD1-203ENST00000394961 XIRP2A4UGR9 3374 aa6.79□□□□□ -1.32
SMARCAD1-203ENST00000394961 SEC24AO95486 1093 aa6.79□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms