RNA–Protein interactions for RNA: ENST00000394611.6

RTN4-206, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 4,161 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-206ENST00000394611 PPP1R15BQ5SWA1 713 aa9.34□□□□□ -0.91
RTN4-206ENST00000394611 C12orf60Q5U649 245 aa9.34□□□□□ -0.91
RTN4-206ENST00000394611 ZCCHC23Q6ZST2 131 aa9.34□□□□□ -0.91
RTN4-206ENST00000394611 LRRC6Q86X45 466 aa9.34□□□□□ -0.91
RTN4-206ENST00000394611 HSPH1Q92598 858 aa9.34□□□□□ -0.91
RTN4-206ENST00000394611 APOL6Q9BWW8 343 aa9.34□□□□□ -0.91
RTN4-206ENST00000394611 GPRC5CQ9NQ84 441 aa9.34□□□□□ -0.91
RTN4-206ENST00000394611 NDE1Q9NXR1 346 aa9.34□□□□□ -0.91
RTN4-206ENST00000394611 TXNDC16Q9P2K2 825 aa9.34□□□□□ -0.91
RTN4-206ENST00000394611 COL1A1P02452 1464 aaPredicted RBP9.33□□□□□ -0.92
RTN4-206ENST00000394611 NEMP1O14524 444 aa9.33□□□□□ -0.92
RTN4-206ENST00000394611 DCTN3O75935 186 aa9.33□□□□□ -0.92
RTN4-206ENST00000394611 SSTR1P30872 391 aa9.33□□□□□ -0.92
RTN4-206ENST00000394611 TUBP50607 506 aa9.33□□□□□ -0.92
RTN4-206ENST00000394611 C15orf52Q6ZUT6 534 aaKnown RBP9.33□□□□□ -0.92
RTN4-206ENST00000394611 PYDC1Q8WXC3 89 aa9.33□□□□□ -0.92
RTN4-206ENST00000394611 ACAP3Q96P50 834 aa9.33□□□□□ -0.92
RTN4-206ENST00000394611 MOV10L1Q9BXT6 1211 aaKnown RBP9.33□□□□□ -0.92
RTN4-206ENST00000394611 APPL1Q9UKG1 709 aa9.33□□□□□ -0.92
RTN4-206ENST00000394611 PCDHB4Q9Y5E5 795 aa9.33□□□□□ -0.92
RTN4-206ENST00000394611 PCDHGC5Q9Y5F6 944 aa9.33□□□□□ -0.92
RTN4-206ENST00000394611 H7C0C1 242 aa9.33□□□□□ -0.92
RTN4-206ENST00000394611 DNAJC8O75937 253 aaPredicted RBP9.33□□□□□ -0.92
RTN4-206ENST00000394611 ATP5OP48047 213 aa9.33□□□□□ -0.92
RTN4-206ENST00000394611 ORC1Q13415 861 aa9.33□□□□□ -0.92
RTN4-206ENST00000394611 CYP4X1Q8N118 509 aa9.33□□□□□ -0.92
RTN4-206ENST00000394611 LNX1Q8TBB1 728 aaPredicted RBP9.33□□□□□ -0.92
RTN4-206ENST00000394611 TEKT1Q969V4 418 aa9.33□□□□□ -0.92
RTN4-206ENST00000394611 PPWD1Q96BP3 646 aaKnown RBP9.33□□□□□ -0.92
RTN4-206ENST00000394611 HEY1Q9Y5J3 304 aa9.33□□□□□ -0.92
RTN4-206ENST00000394611 YDJCA8MPS7 323 aa9.33□□□□□ -0.92
RTN4-206ENST00000394611 RPA3P35244 121 aaPredicted RBP9.33□□□□□ -0.92
RTN4-206ENST00000394611 CCNFP41002 786 aa9.33□□□□□ -0.92
RTN4-206ENST00000394611 DLG4P78352 724 aa9.33□□□□□ -0.92
RTN4-206ENST00000394611 MIS18BP1Q6P0N0 1132 aa9.33□□□□□ -0.92
RTN4-206ENST00000394611 TMEM270Q6UE05 265 aa9.33□□□□□ -0.92
RTN4-206ENST00000394611 YTHDF3Q7Z739 585 aaKnown RBP9.33□□□□□ -0.92
RTN4-206ENST00000394611 FBXO11Q86XK2 927 aa9.33□□□□□ -0.92
RTN4-206ENST00000394611 ECHDC2Q86YB7 292 aa9.33□□□□□ -0.92
RTN4-206ENST00000394611 PRELID2Q8N945 189 aa9.33□□□□□ -0.92
RTN4-206ENST00000394611 CEP120Q8N960 986 aa9.33□□□□□ -0.92
RTN4-206ENST00000394611 SMC1BQ8NDV3 1235 aa9.33□□□□□ -0.92
RTN4-206ENST00000394611 MAK16Q9BXY0 300 aaKnown RBP9.33□□□□□ -0.92
RTN4-206ENST00000394611 SEPT10Q9P0V9 454 aa9.33□□□□□ -0.92
RTN4-206ENST00000394611 NXF1Q9UBU9 619 aaKnown RBP9.33□□□□□ -0.92
RTN4-206ENST00000394611 GON4LQ3T8J9 2241 aa9.33□□□□□ -0.92
RTN4-206ENST00000394611 AKAP11Q9UKA4 1901 aa9.32□□□□□ -0.92
RTN4-206ENST00000394611 CLRN2A0PK11 232 aa9.32□□□□□ -0.92
RTN4-206ENST00000394611 CDH16O75309 829 aa9.32□□□□□ -0.92
RTN4-206ENST00000394611 SLC13A5Q86YT5 568 aaPredicted RBP9.32□□□□□ -0.92
RTN4-206ENST00000394611 FBXL16Q8N461 479 aa9.32□□□□□ -0.92
RTN4-206ENST00000394611 ACTRT1Q8TDG2 376 aa9.32□□□□□ -0.92
RTN4-206ENST00000394611 SNF8Q96H20 258 aa9.32□□□□□ -0.92
RTN4-206ENST00000394611 HIC2Q96JB3 615 aa9.32□□□□□ -0.92
RTN4-206ENST00000394611 SENP7Q9BQF6 1050 aa9.32□□□□□ -0.92
RTN4-206ENST00000394611 CBWD1Q9BRT8 395 aa9.32□□□□□ -0.92
RTN4-206ENST00000394611 COA1Q9GZY4 146 aa9.32□□□□□ -0.92
RTN4-206ENST00000394611 VCX3AQ9NNX9 186 aa9.32□□□□□ -0.92
RTN4-206ENST00000394611 NEU2Q9Y3R4 380 aa9.32□□□□□ -0.92
RTN4-206ENST00000394611 WASF2Q9Y6W5 498 aa9.32□□□□□ -0.92
RTN4-206ENST00000394611 KIAA0391O15091 583 aaKnown RBP9.32□□□□□ -0.92
RTN4-206ENST00000394611 HNRNPRO43390 633 aaKnown RBP9.32□□□□□ -0.92
RTN4-206ENST00000394611 LPXNO60711 386 aa9.32□□□□□ -0.92
RTN4-206ENST00000394611 MAGEA4P43358 317 aa9.32□□□□□ -0.92
RTN4-206ENST00000394611 PRAMEP78395 509 aa9.32□□□□□ -0.92
RTN4-206ENST00000394611 ICA1Q05084 483 aa9.32□□□□□ -0.92
RTN4-206ENST00000394611 BMPR2Q13873 1038 aa9.32□□□□□ -0.92
RTN4-206ENST00000394611 TCHHL1Q5QJ38 904 aaPredicted RBP9.32□□□□□ -0.92
RTN4-206ENST00000394611 TTC27Q6P3X3 843 aa9.32□□□□□ -0.92
RTN4-206ENST00000394611 CYFIP1Q7L576 1253 aa9.32□□□□□ -0.92
RTN4-206ENST00000394611 MIER3Q7Z3K6 550 aa9.32□□□□□ -0.92
RTN4-206ENST00000394611 ELOA2Q8IYF1 753 aaPredicted RBP9.32□□□□□ -0.92
RTN4-206ENST00000394611 ARHGAP24Q8N264 748 aa9.32□□□□□ -0.92
RTN4-206ENST00000394611 FAM13CQ8NE31 585 aa9.32□□□□□ -0.92
RTN4-206ENST00000394611 TNFRSF25Q93038 417 aa9.32□□□□□ -0.92
RTN4-206ENST00000394611 C1orf112Q9NSG2 853 aa9.32□□□□□ -0.92
RTN4-206ENST00000394611 TYW1Q9NV66 732 aaKnown RBP9.32□□□□□ -0.92
RTN4-206ENST00000394611 SUCLA2Q9P2R7 463 aaPredicted RBP9.32□□□□□ -0.92
RTN4-206ENST00000394611 MRPL42Q9Y6G3 142 aaKnown RBP9.32□□□□□ -0.92
RTN4-206ENST00000394611 SCN9AQ15858 1988 aa9.32□□□□□ -0.92
RTN4-206ENST00000394611 PITPNM2Q9BZ72 1349 aa9.32□□□□□ -0.92
RTN4-206ENST00000394611 A0A1W2PPM1 405 aa9.32□□□□□ -0.92
RTN4-206ENST00000394611 MGRN1O60291 552 aa9.32□□□□□ -0.92
RTN4-206ENST00000394611 IL1R1P14778 569 aa9.32□□□□□ -0.92
RTN4-206ENST00000394611 PTENP60484 403 aa9.32□□□□□ -0.92
RTN4-206ENST00000394611 EFTUD2Q15029 972 aaKnown RBP eCLIP9.32□□□□□ -0.924e-14■■■■■ 28.8
RTN4-206ENST00000394611 C4orf32Q8N8J7 132 aa9.32□□□□□ -0.92
RTN4-206ENST00000394611 NT5C1BQ96P26 610 aa9.32□□□□□ -0.92
RTN4-206ENST00000394611 ZNF577Q9BSK1 485 aa9.32□□□□□ -0.92
RTN4-206ENST00000394611 TMEM121Q9BTD3 319 aa9.32□□□□□ -0.92
RTN4-206ENST00000394611 UNKQ9C0B0 810 aaKnown RBP9.32□□□□□ -0.92
RTN4-206ENST00000394611 RXFP1Q9HBX9 757 aa9.32□□□□□ -0.92
RTN4-206ENST00000394611 BGNP21810 368 aa9.31□□□□□ -0.92
RTN4-206ENST00000394611 MRPS35P82673 323 aaKnown RBP9.31□□□□□ -0.92
RTN4-206ENST00000394611 ITIH3Q06033 890 aa9.31□□□□□ -0.92
RTN4-206ENST00000394611 PEX6Q13608 980 aa9.31□□□□□ -0.92
RTN4-206ENST00000394611 FASTKD3Q14CZ7 662 aaKnown RBP9.31□□□□□ -0.92
RTN4-206ENST00000394611 LIN9Q5TKA1 542 aa9.31□□□□□ -0.92
RTN4-206ENST00000394611 DSTYKQ6XUX3 929 aa9.31□□□□□ -0.92
RTN4-206ENST00000394611 TTC7BQ86TV6 843 aa9.31□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms