RNA–Protein interactions for RNA: ENST00000394597.6

RFFL-202, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RFFL, Length 4,227 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-202ENST00000394597 CCDC110Q8TBZ0 833 aa6.03□□□□□ -1.44
RFFL-202ENST00000394597 ANKRD27Q96NW4 1050 aa6.03□□□□□ -1.44
RFFL-202ENST00000394597 ERGIC2Q96RQ1 377 aa6.03□□□□□ -1.44
RFFL-202ENST00000394597 FERMT1Q9BQL6 677 aa6.03□□□□□ -1.44
RFFL-202ENST00000394597 APOL6Q9BWW8 343 aa6.03□□□□□ -1.44
RFFL-202ENST00000394597 INTS2Q9H0H0 1204 aaKnown RBP6.03□□□□□ -1.44
RFFL-202ENST00000394597 Q9H521 79 aa6.03□□□□□ -1.44
RFFL-202ENST00000394597 GPBP1L1Q9HC44 474 aaPredicted RBP6.03□□□□□ -1.44
RFFL-202ENST00000394597 CYP39A1Q9NYL5 469 aa6.03□□□□□ -1.44
RFFL-202ENST00000394597 ERAP1Q9NZ08 941 aa6.03□□□□□ -1.44
RFFL-202ENST00000394597 EMSYQ7Z589 1322 aa6.03□□□□□ -1.44
RFFL-202ENST00000394597 DYTNA2CJ06 578 aa6.02□□□□□ -1.45
RFFL-202ENST00000394597 MAGEA13PA6NCF6 341 aa6.02□□□□□ -1.45
RFFL-202ENST00000394597 SPDYE16A6NNV3 312 aaPredicted RBP6.02□□□□□ -1.45
RFFL-202ENST00000394597 DNAJC6O75061 913 aa6.02□□□□□ -1.45
RFFL-202ENST00000394597 DCTN3O75935 186 aa6.02□□□□□ -1.45
RFFL-202ENST00000394597 CYP2B6P20813 491 aa6.02□□□□□ -1.45
RFFL-202ENST00000394597 POLR2BP30876 1174 aaKnown RBP6.02□□□□□ -1.45
RFFL-202ENST00000394597 MAPK4P31152 587 aa6.02□□□□□ -1.45
RFFL-202ENST00000394597 CACNA2D1P54289 1103 aa6.02□□□□□ -1.45
RFFL-202ENST00000394597 SLC12A3P55017 1021 aa6.02□□□□□ -1.45
RFFL-202ENST00000394597 CNTN2Q02246 1040 aa6.02□□□□□ -1.45
RFFL-202ENST00000394597 BYSLQ13895 437 aaKnown RBP6.02□□□□□ -1.45
RFFL-202ENST00000394597 ZNF568Q3ZCX4 644 aa6.02□□□□□ -1.45
RFFL-202ENST00000394597 PAPD7Q5XG87 772 aaKnown RBP6.02□□□□□ -1.45
RFFL-202ENST00000394597 PDXDC1Q6P996 788 aa6.02□□□□□ -1.45
RFFL-202ENST00000394597 MOB2Q70IA6 237 aa6.02□□□□□ -1.45
RFFL-202ENST00000394597 ERICH1Q86X53 443 aa6.02□□□□□ -1.45
RFFL-202ENST00000394597 SIAH1Q8IUQ4 282 aa6.02□□□□□ -1.45
RFFL-202ENST00000394597 KIAA0895Q8NCT3 520 aa6.02□□□□□ -1.45
RFFL-202ENST00000394597 SCFD1Q8WVM8 642 aa6.02□□□□□ -1.45
RFFL-202ENST00000394597 RBM41Q96IZ5 413 aaKnown RBP6.02□□□□□ -1.45
RFFL-202ENST00000394597 RPS6KC1Q96S38 1066 aa6.02□□□□□ -1.45
RFFL-202ENST00000394597 SH3GL2Q99962 352 aa6.02□□□□□ -1.45
RFFL-202ENST00000394597 SIKE1Q9BRV8 207 aa6.02□□□□□ -1.45
RFFL-202ENST00000394597 DDX47Q9H0S4 455 aaKnown RBP6.02□□□□□ -1.45
RFFL-202ENST00000394597 CCDC88AQ3V6T2 1871 aa6.02□□□□□ -1.45
RFFL-202ENST00000394597 BAZ2AQ9UIF9 1905 aaKnown RBP6.02□□□□□ -1.45
RFFL-202ENST00000394597 ATP2A1O14983 1001 aa6.02□□□□□ -1.45
RFFL-202ENST00000394597 GYG2O15488 501 aa6.02□□□□□ -1.45
RFFL-202ENST00000394597 PALMO75781 387 aa6.02□□□□□ -1.45
RFFL-202ENST00000394597 STAMBPO95630 424 aa6.02□□□□□ -1.45
RFFL-202ENST00000394597 EGFRP00533 1210 aa6.02□□□□□ -1.45
RFFL-202ENST00000394597 RFX1P22670 979 aa6.02□□□□□ -1.45
RFFL-202ENST00000394597 PCYT1AP49585 367 aa6.02□□□□□ -1.45
RFFL-202ENST00000394597 CDC42EP1Q00587 391 aa6.02□□□□□ -1.45
RFFL-202ENST00000394597 CDR2Q01850 454 aa6.02□□□□□ -1.45
RFFL-202ENST00000394597 XRCC4Q13426 336 aa6.02□□□□□ -1.45
RFFL-202ENST00000394597 DRAP1Q14919 205 aaPredicted RBP6.02□□□□□ -1.45
RFFL-202ENST00000394597 SLC35G1Q2M3R5 365 aa6.02□□□□□ -1.45
RFFL-202ENST00000394597 Q3C1V9 767 aa6.02□□□□□ -1.45
RFFL-202ENST00000394597 PPP1R2P3Q6NXS1 205 aa6.02□□□□□ -1.45
RFFL-202ENST00000394597 GSTA5Q7RTV2 222 aa6.02□□□□□ -1.45
RFFL-202ENST00000394597 NANOGNBQ7Z5D8 188 aa6.02□□□□□ -1.45
RFFL-202ENST00000394597 RNF169Q8NCN4 708 aa6.02□□□□□ -1.45
RFFL-202ENST00000394597 PIP4K2CQ8TBX8 421 aa6.02□□□□□ -1.45
RFFL-202ENST00000394597 MMTAG2Q9BU76 263 aaKnown RBP6.02□□□□□ -1.45
RFFL-202ENST00000394597 OLFML3Q9NRN5 406 aa6.02□□□□□ -1.45
RFFL-202ENST00000394597 FGFR1OP2Q9NVK5 253 aa6.02□□□□□ -1.45
RFFL-202ENST00000394597 TBK1Q9UHD2 729 aa6.02□□□□□ -1.45
RFFL-202ENST00000394597 USTQ9Y2C2 406 aa6.02□□□□□ -1.45
RFFL-202ENST00000394597 AFG3L2Q9Y4W6 797 aa6.02□□□□□ -1.45
RFFL-202ENST00000394597 IGSF9BQ9UPX0 1349 aa6.02□□□□□ -1.45
RFFL-202ENST00000394597 CNTNAP1P78357 1384 aa6.02□□□□□ -1.45
RFFL-202ENST00000394597 TNKS1BP1Q9C0C2 1729 aaKnown RBP6.02□□□□□ -1.45
RFFL-202ENST00000394597 FAM170AA1A519 330 aa6.02□□□□□ -1.45
RFFL-202ENST00000394597 M0R2N6 131 aa6.02□□□□□ -1.45
RFFL-202ENST00000394597 DAPK3O43293 454 aa6.02□□□□□ -1.45
RFFL-202ENST00000394597 KLRC4O43908 158 aa6.02□□□□□ -1.45
RFFL-202ENST00000394597 PRKCBP05771 671 aa6.02□□□□□ -1.45
RFFL-202ENST00000394597 BMP6P22004 513 aa6.02□□□□□ -1.45
RFFL-202ENST00000394597 SERPINB6P35237 376 aa6.02□□□□□ -1.45
RFFL-202ENST00000394597 HSD17B3P37058 310 aa6.02□□□□□ -1.45
RFFL-202ENST00000394597 VHLP40337 213 aa6.02□□□□□ -1.45
RFFL-202ENST00000394597 FMO5P49326 533 aa6.02□□□□□ -1.45
RFFL-202ENST00000394597 RARRES1P49788 294 aa6.02□□□□□ -1.45
RFFL-202ENST00000394597 ERVK-9P63128 1117 aa6.02□□□□□ -1.45
RFFL-202ENST00000394597 FKBP1BP68106 108 aa6.02□□□□□ -1.45
RFFL-202ENST00000394597 JAG1P78504 1218 aa6.02□□□□□ -1.45
RFFL-202ENST00000394597 ITIH3Q06033 890 aa6.02□□□□□ -1.45
RFFL-202ENST00000394597 BFSP1Q12934 665 aa6.02□□□□□ -1.45
RFFL-202ENST00000394597 TBX2Q13207 712 aaPredicted RBP6.02□□□□□ -1.45
RFFL-202ENST00000394597 BLMHQ13867 455 aa6.02□□□□□ -1.45
RFFL-202ENST00000394597 OLFML1Q6UWY5 402 aa6.02□□□□□ -1.45
RFFL-202ENST00000394597 AGGF1Q8N302 714 aaeCLIP6.02□□□□□ -1.45
RFFL-202ENST00000394597 C7orf31Q8N865 590 aa6.02□□□□□ -1.45
RFFL-202ENST00000394597 TRIM11Q96F44 468 aa6.02□□□□□ -1.45
RFFL-202ENST00000394597 ZNF668Q96K58 619 aaPredicted RBP6.02□□□□□ -1.45
RFFL-202ENST00000394597 TTC1Q99614 292 aa6.02□□□□□ -1.45
RFFL-202ENST00000394597 EPAS1Q99814 870 aa6.02□□□□□ -1.45
RFFL-202ENST00000394597 MAK16Q9BXY0 300 aaKnown RBP6.02□□□□□ -1.45
RFFL-202ENST00000394597 GCOM2Q9BZD3 368 aaPredicted RBP6.02□□□□□ -1.45
RFFL-202ENST00000394597 TMBIM4Q9HC24 238 aa6.02□□□□□ -1.45
RFFL-202ENST00000394597 AGPAT3Q9NRZ7 376 aa6.02□□□□□ -1.45
RFFL-202ENST00000394597 AGPAT5Q9NUQ2 364 aa6.02□□□□□ -1.45
RFFL-202ENST00000394597 RBAKQ9NYW8 714 aaPredicted RBP6.02□□□□□ -1.45
RFFL-202ENST00000394597 NXF1Q9UBU9 619 aaKnown RBP6.02□□□□□ -1.45
RFFL-202ENST00000394597 TBX20Q9UMR3 447 aa6.02□□□□□ -1.45
RFFL-202ENST00000394597 SCINQ9Y6U3 715 aa6.02□□□□□ -1.45
RFFL-202ENST00000394597 SCN7AQ01118 1682 aa6.02□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms