RNA–Protein interactions for RNA: ENST00000393368.2

HMGB3P1-201, Transcript of high mobility group box 3 pseudogene 1, humanhuman

BASIC

Gene HMGB3P1, Length 573 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P1-201ENST00000393368 ARPP19P56211 112 aa8.32□□□□□ -1.08
HMGB3P1-201ENST00000393368 DPYDQ12882 1025 aa8.32□□□□□ -1.08
HMGB3P1-201ENST00000393368 PNOCQ13519 176 aa8.32□□□□□ -1.08
HMGB3P1-201ENST00000393368 KYAT1Q16773 422 aa8.32□□□□□ -1.08
HMGB3P1-201ENST00000393368 PUS10Q3MIT2 529 aaKnown RBP8.32□□□□□ -1.08
HMGB3P1-201ENST00000393368 VARS2Q5ST30 1063 aaKnown RBP8.32□□□□□ -1.08
HMGB3P1-201ENST00000393368 PDZRN4Q6ZMN7 1036 aaPredicted RBP8.32□□□□□ -1.08
HMGB3P1-201ENST00000393368 STXBP4Q6ZWJ1 553 aa8.32□□□□□ -1.08
HMGB3P1-201ENST00000393368 BRSK2Q8IWQ3 736 aa8.32□□□□□ -1.08
HMGB3P1-201ENST00000393368 FMR1NBQ8N0W7 255 aaPredicted RBP8.32□□□□□ -1.08
HMGB3P1-201ENST00000393368 RDH13Q8NBN7 331 aa8.32□□□□□ -1.08
HMGB3P1-201ENST00000393368 ZNF507Q8TCN5 953 aa8.32□□□□□ -1.08
HMGB3P1-201ENST00000393368 PIK3R5Q8WYR1 880 aa8.32□□□□□ -1.08
HMGB3P1-201ENST00000393368 SUSD6Q92537 303 aa8.32□□□□□ -1.08
HMGB3P1-201ENST00000393368 RPGRIP1Q96KN7 1286 aa8.32□□□□□ -1.08
HMGB3P1-201ENST00000393368 TMEM206Q9H813 350 aa8.32□□□□□ -1.08
HMGB3P1-201ENST00000393368 PDE11AQ9HCR9 933 aa8.32□□□□□ -1.08
HMGB3P1-201ENST00000393368 RTN4Q9NQC3 1192 aaKnown RBP8.32□□□□□ -1.08
HMGB3P1-201ENST00000393368 AGPAT3Q9NRZ7 376 aa8.32□□□□□ -1.08
HMGB3P1-201ENST00000393368 EXOC1Q9NV70 894 aa8.32□□□□□ -1.08
HMGB3P1-201ENST00000393368 RBAKQ9NYW8 714 aaPredicted RBP8.32□□□□□ -1.08
HMGB3P1-201ENST00000393368 HSPBP1Q9NZL4 362 aa8.32□□□□□ -1.08
HMGB3P1-201ENST00000393368 STK39Q9UEW8 545 aa8.32□□□□□ -1.08
HMGB3P1-201ENST00000393368 MAPK8IP1Q9UQF2 711 aa8.32□□□□□ -1.08
HMGB3P1-201ENST00000393368 SSX2IPQ9Y2D8 614 aa8.32□□□□□ -1.08
HMGB3P1-201ENST00000393368 CDY1Q9Y6F8 540 aa8.32□□□□□ -1.08
HMGB3P1-201ENST00000393368 FSD2A1L4K1 749 aa8.31□□□□□ -1.08
HMGB3P1-201ENST00000393368 GOLGA6L4A6NEF3 574 aa8.31□□□□□ -1.08
HMGB3P1-201ENST00000393368 EIF3DO15371 548 aaKnown RBP eCLIP8.31□□□□□ -1.08
HMGB3P1-201ENST00000393368 OR4Q2P0C623 313 aa8.31□□□□□ -1.08
HMGB3P1-201ENST00000393368 CYP3A5P20815 502 aa8.31□□□□□ -1.08
HMGB3P1-201ENST00000393368 LRPAP1P30533 357 aa8.31□□□□□ -1.08
HMGB3P1-201ENST00000393368 OR1D2P34982 312 aa8.31□□□□□ -1.08
HMGB3P1-201ENST00000393368 TFAMQ00059 246 aaKnown RBP8.31□□□□□ -1.08
HMGB3P1-201ENST00000393368 ELAVL2Q12926 359 aaKnown RBP8.31□□□□□ -1.08
HMGB3P1-201ENST00000393368 SNW1Q13573 536 aaKnown RBP8.31□□□□□ -1.08
HMGB3P1-201ENST00000393368 CBX2Q14781 532 aaPredicted RBP8.31□□□□□ -1.08
HMGB3P1-201ENST00000393368 POSTNQ15063 836 aa8.31□□□□□ -1.08
HMGB3P1-201ENST00000393368 BMT2Q1RMZ1 405 aa8.31□□□□□ -1.08
HMGB3P1-201ENST00000393368 SPATA1Q5VX52 437 aa8.31□□□□□ -1.08
HMGB3P1-201ENST00000393368 C9orf57Q5W0N0 161 aa8.31□□□□□ -1.08
HMGB3P1-201ENST00000393368 PPFIBP1Q86W92 1011 aa8.31□□□□□ -1.08
HMGB3P1-201ENST00000393368 ADHFE1Q8IWW8 467 aa8.31□□□□□ -1.08
HMGB3P1-201ENST00000393368 SMYD4Q8IYR2 804 aaPredicted RBP8.31□□□□□ -1.08
HMGB3P1-201ENST00000393368 GJD3Q8N144 294 aa8.31□□□□□ -1.08
HMGB3P1-201ENST00000393368 GPD1LQ8N335 351 aa8.31□□□□□ -1.08
HMGB3P1-201ENST00000393368 BEST2Q8NFU1 509 aa8.31□□□□□ -1.08
HMGB3P1-201ENST00000393368 SUSD3Q96L08 255 aa8.31□□□□□ -1.08
HMGB3P1-201ENST00000393368 MTMR12Q9C0I1 747 aa8.31□□□□□ -1.08
HMGB3P1-201ENST00000393368 ADAM7Q9H2U9 754 aa8.31□□□□□ -1.08
HMGB3P1-201ENST00000393368 POMKQ9H5K3 350 aa8.31□□□□□ -1.08
HMGB3P1-201ENST00000393368 SFXN1Q9H9B4 322 aa8.31□□□□□ -1.08
HMGB3P1-201ENST00000393368 TSHZ2Q9NRE2 1034 aa8.31□□□□□ -1.08
HMGB3P1-201ENST00000393368 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP8.31□□□□□ -1.08
HMGB3P1-201ENST00000393368 DZANK1Q9NVP4 752 aa8.31□□□□□ -1.08
HMGB3P1-201ENST00000393368 DPP3Q9NY33 737 aa8.31□□□□□ -1.08
HMGB3P1-201ENST00000393368 FNIP2Q9P278 1114 aa8.31□□□□□ -1.08
HMGB3P1-201ENST00000393368 MTRRQ9UBK8 725 aa8.31□□□□□ -1.08
HMGB3P1-201ENST00000393368 USP25Q9UHP3 1055 aa8.31□□□□□ -1.08
HMGB3P1-201ENST00000393368 CIZ1Q9ULV3 898 aaPredicted RBP8.31□□□□□ -1.08
HMGB3P1-201ENST00000393368 C2CD2Q9Y426 696 aa8.31□□□□□ -1.08
HMGB3P1-201ENST00000393368 UBE4BO95155 1302 aa8.3□□□□□ -1.08
HMGB3P1-201ENST00000393368 PLXNA3P51805 1871 aa8.3□□□□□ -1.08
HMGB3P1-201ENST00000393368 CCDC195A0A1B0GUA6 201 aa8.3□□□□□ -1.08
HMGB3P1-201ENST00000393368 XPOTO43592 962 aaKnown RBP8.3□□□□□ -1.08
HMGB3P1-201ENST00000393368 TRAPPC3O43617 180 aa8.3□□□□□ -1.08
HMGB3P1-201ENST00000393368 IL18RAPO95256 599 aa8.3□□□□□ -1.08
HMGB3P1-201ENST00000393368 ITGB3P05106 788 aa8.3□□□□□ -1.08
HMGB3P1-201ENST00000393368 HOXB8P17481 243 aaPredicted RBP8.3□□□□□ -1.08
HMGB3P1-201ENST00000393368 POLR2BP30876 1174 aaKnown RBP8.3□□□□□ -1.08
HMGB3P1-201ENST00000393368 CASP4P49662 377 aa8.3□□□□□ -1.08
HMGB3P1-201ENST00000393368 ROR1Q01973 937 aa8.3□□□□□ -1.08
HMGB3P1-201ENST00000393368 KNOP1Q1ED39 458 aaKnown RBP8.3□□□□□ -1.08
HMGB3P1-201ENST00000393368 CES5AQ6NT32 575 aa8.3□□□□□ -1.08
HMGB3P1-201ENST00000393368 LILRA6Q6PI73 481 aa8.3□□□□□ -1.08
HMGB3P1-201ENST00000393368 DSTYKQ6XUX3 929 aa8.3□□□□□ -1.08
HMGB3P1-201ENST00000393368 CD302Q8IX05 232 aa8.3□□□□□ -1.08
HMGB3P1-201ENST00000393368 KREMEN2Q8NCW0 462 aa8.3□□□□□ -1.08
HMGB3P1-201ENST00000393368 ENGASEQ8NFI3 743 aa8.3□□□□□ -1.08
HMGB3P1-201ENST00000393368 OR5B17Q8NGF7 314 aa8.3□□□□□ -1.08
HMGB3P1-201ENST00000393368 CCDC127Q96BQ5 260 aa8.3□□□□□ -1.08
HMGB3P1-201ENST00000393368 ZNF707Q96C28 371 aaPredicted RBP8.3□□□□□ -1.08
HMGB3P1-201ENST00000393368 POP1Q99575 1024 aaKnown RBP8.3□□□□□ -1.08
HMGB3P1-201ENST00000393368 ASB7Q9H672 318 aa8.3□□□□□ -1.08
HMGB3P1-201ENST00000393368 PCDHB8Q9UN66 801 aa8.3□□□□□ -1.08
HMGB3P1-201ENST00000393368 FAM50BQ9Y247 325 aa8.3□□□□□ -1.08
HMGB3P1-201ENST00000393368 DERAQ9Y315 318 aa8.3□□□□□ -1.08
HMGB3P1-201ENST00000393368 BRWD1Q9NSI6 2320 aa8.3□□□□□ -1.08
HMGB3P1-201ENST00000393368 ANO9A1A5B4 782 aa8.29□□□□□ -1.08
HMGB3P1-201ENST00000393368 WDR27A2RRH5 827 aa8.29□□□□□ -1.08
HMGB3P1-201ENST00000393368 C2CD4DB7Z1M9 353 aa8.29□□□□□ -1.08
HMGB3P1-201ENST00000393368 M0QZQ0 153 aa8.29□□□□□ -1.08
HMGB3P1-201ENST00000393368 PIRO00625 290 aa8.29□□□□□ -1.08
HMGB3P1-201ENST00000393368 SYN3O14994 580 aa8.29□□□□□ -1.08
HMGB3P1-201ENST00000393368 CCL16O15467 120 aa8.29□□□□□ -1.08
HMGB3P1-201ENST00000393368 TBC1D4O60343 1298 aa8.29□□□□□ -1.08
HMGB3P1-201ENST00000393368 LDHAP00338 332 aaKnown RBP8.29□□□□□ -1.08
HMGB3P1-201ENST00000393368 C8AP07357 584 aa8.29□□□□□ -1.08
HMGB3P1-201ENST00000393368 KRT19P08727 400 aa8.29□□□□□ -1.08
HMGB3P1-201ENST00000393368 DLATP10515 647 aaKnown RBP8.29□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms