RNA–Protein interactions for RNA: ENST00000392959.5

LCA5-202, Transcript of LCA5, lebercilin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LCA5, Length 4,719 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCA5-202ENST00000392959 UGP2Q16851 508 aa13.79□□□□□ -0.2
LCA5-202ENST00000392959 SGSM1Q2NKQ1 1148 aa13.79□□□□□ -0.2
LCA5-202ENST00000392959 LVRNQ6Q4G3 990 aa13.79□□□□□ -0.2
LCA5-202ENST00000392959 C16orf86Q6ZW13 317 aa13.79□□□□□ -0.2
LCA5-202ENST00000392959 TPCN2Q8NHX9 752 aa13.79□□□□□ -0.2
LCA5-202ENST00000392959 MYCBPAPQ8TBZ2 947 aa13.79□□□□□ -0.2
LCA5-202ENST00000392959 THAP11Q96EK4 314 aa13.79□□□□□ -0.2
LCA5-202ENST00000392959 PCMTD2Q9NV79 361 aa13.79□□□□□ -0.2
LCA5-202ENST00000392959 LOC102724159A0A0B4J2E5 919 aa13.78□□□□□ -0.2
LCA5-202ENST00000392959 C3orf70A6NLC5 250 aaPredicted RBP13.78□□□□□ -0.2
LCA5-202ENST00000392959 ENO4A6NNW6 628 aa13.78□□□□□ -0.2
LCA5-202ENST00000392959 KLHL2O95198 593 aa13.78□□□□□ -0.2
LCA5-202ENST00000392959 WEE2P0C1S8 567 aa13.78□□□□□ -0.2
LCA5-202ENST00000392959 PWP2Q15269 919 aaKnown RBP13.78□□□□□ -0.2
LCA5-202ENST00000392959 KCTD17Q8N5Z5 321 aa13.78□□□□□ -0.2
LCA5-202ENST00000392959 NAF1Q96HR8 494 aaKnown RBP13.78□□□□□ -0.2
LCA5-202ENST00000392959 ANGPT2O15123 496 aa13.78□□□□□ -0.2
LCA5-202ENST00000392959 CST8O60676 142 aa13.78□□□□□ -0.2
LCA5-202ENST00000392959 GFAPP14136 432 aa13.78□□□□□ -0.2
LCA5-202ENST00000392959 CD44P16070 742 aaKnown RBP13.78□□□□□ -0.2
LCA5-202ENST00000392959 PRLRP16471 622 aa13.78□□□□□ -0.2
LCA5-202ENST00000392959 TPI1P60174 286 aa13.78□□□□□ -0.2
LCA5-202ENST00000392959 CENPCQ03188 943 aa13.78□□□□□ -0.2
LCA5-202ENST00000392959 MXD4Q14582 209 aaPredicted RBP13.78□□□□□ -0.2
LCA5-202ENST00000392959 TRADDQ15628 312 aa13.78□□□□□ -0.2
LCA5-202ENST00000392959 SLC13A5Q86YT5 568 aaPredicted RBP13.78□□□□□ -0.2
LCA5-202ENST00000392959 TMEM143Q96AN5 459 aa13.78□□□□□ -0.2
LCA5-202ENST00000392959 TMEM8AQ9HCN3 771 aa13.78□□□□□ -0.2
LCA5-202ENST00000392959 PAK5Q9P286 719 aa13.78□□□□□ -0.2
LCA5-202ENST00000392959 GTF3C4Q9UKN8 822 aa13.78□□□□□ -0.2
LCA5-202ENST00000392959 HLA-DRAP01903 254 aa13.78□□□□□ -0.2
LCA5-202ENST00000392959 DAB2P98082 770 aa13.78□□□□□ -0.2
LCA5-202ENST00000392959 MAPK7Q13164 816 aa13.78□□□□□ -0.2
LCA5-202ENST00000392959 INPP5AQ14642 412 aa13.78□□□□□ -0.2
LCA5-202ENST00000392959 OR9Q1Q8NGQ5 310 aa13.78□□□□□ -0.2
LCA5-202ENST00000392959 SPATA18Q8TC71 538 aa13.78□□□□□ -0.2
LCA5-202ENST00000392959 CASKIN2Q8WXE0 1202 aa13.78□□□□□ -0.2
LCA5-202ENST00000392959 CLMNQ96JQ2 1002 aa13.78□□□□□ -0.2
LCA5-202ENST00000392959 PPP1R36Q96LQ0 422 aa13.78□□□□□ -0.2
LCA5-202ENST00000392959 PRR12Q9ULL5 1215 aa13.78□□□□□ -0.2
LCA5-202ENST00000392959 CAPN6Q9Y6Q1 641 aa13.78□□□□□ -0.2
LCA5-202ENST00000392959 TULP4Q9NRJ4 1543 aa13.78□□□□□ -0.2
LCA5-202ENST00000392959 AP3B1O00203 1094 aa13.78□□□□□ -0.2
LCA5-202ENST00000392959 HNRNPCP07910 306 aaKnown RBP eCLIP13.78□□□□□ -0.2
LCA5-202ENST00000392959 PCYT1AP49585 367 aa13.78□□□□□ -0.2
LCA5-202ENST00000392959 RGS7P49802 495 aa13.78□□□□□ -0.2
LCA5-202ENST00000392959 SZRD1Q7Z422 152 aa13.78□□□□□ -0.2
LCA5-202ENST00000392959 COL23A1Q86Y22 540 aaPredicted RBP13.78□□□□□ -0.2
LCA5-202ENST00000392959 TBC1D16Q8TBP0 767 aa13.78□□□□□ -0.2
LCA5-202ENST00000392959 EME1Q96AY2 570 aa13.78□□□□□ -0.2
LCA5-202ENST00000392959 SERPINB12Q96P63 405 aa13.78□□□□□ -0.2
LCA5-202ENST00000392959 GCNAQ96QF7 691 aa13.78□□□□□ -0.2
LCA5-202ENST00000392959 FAM129AQ9BZQ8 928 aa13.78□□□□□ -0.2
LCA5-202ENST00000392959 PIM2Q9P1W9 311 aa13.78□□□□□ -0.2
LCA5-202ENST00000392959 DUSP10Q9Y6W6 482 aa13.78□□□□□ -0.2
LCA5-202ENST00000392959 TMCC1O94876 653 aa13.77□□□□□ -0.2
LCA5-202ENST00000392959 ESRRBO95718 433 aa13.77□□□□□ -0.2
LCA5-202ENST00000392959 COPB2P35606 906 aa13.77□□□□□ -0.2
LCA5-202ENST00000392959 FNTAP49354 379 aa13.77□□□□□ -0.2
LCA5-202ENST00000392959 DNAJC3Q13217 504 aa13.77□□□□□ -0.2
LCA5-202ENST00000392959 MTM1Q13496 603 aa13.77□□□□□ -0.2
LCA5-202ENST00000392959 ARHGEF6Q15052 776 aa13.77□□□□□ -0.2
LCA5-202ENST00000392959 FIGNQ5HY92 759 aa13.77□□□□□ -0.2
LCA5-202ENST00000392959 TRIM62Q9BVG3 475 aa13.77□□□□□ -0.2
LCA5-202ENST00000392959 RPAP3Q9H6T3 665 aaPredicted RBP13.77□□□□□ -0.2
LCA5-202ENST00000392959 RUBCNLQ9H714 662 aa13.77□□□□□ -0.2
LCA5-202ENST00000392959 JMJD4Q9H9V9 463 aa13.77□□□□□ -0.2
LCA5-202ENST00000392959 KIF17Q9P2E2 1029 aa13.77□□□□□ -0.2
LCA5-202ENST00000392959 SNX9Q9Y5X1 595 aa13.77□□□□□ -0.2
LCA5-202ENST00000392959 RNF17Q9BXT8 1623 aaKnown RBP13.77□□□□□ -0.2
LCA5-202ENST00000392959 SEC24DO94855 1032 aaPredicted RBP13.77□□□□□ -0.21
LCA5-202ENST00000392959 RANBP1P43487 201 aa13.77□□□□□ -0.21
LCA5-202ENST00000392959 MRPS35P82673 323 aaKnown RBP13.77□□□□□ -0.21
LCA5-202ENST00000392959 RBP5P82980 135 aa13.77□□□□□ -0.21
LCA5-202ENST00000392959 FLOT2Q14254 428 aa13.77□□□□□ -0.21
LCA5-202ENST00000392959 PAPD7Q5XG87 772 aaKnown RBP13.77□□□□□ -0.21
LCA5-202ENST00000392959 BTBD8Q5XKL5 378 aa13.77□□□□□ -0.21
LCA5-202ENST00000392959 TMEM154Q6P9G4 183 aa13.77□□□□□ -0.21
LCA5-202ENST00000392959 POTEAQ6S8J7 498 aa13.77□□□□□ -0.21
LCA5-202ENST00000392959 LRRC34Q8IZ02 419 aa13.77□□□□□ -0.21
LCA5-202ENST00000392959 KIRREL3Q8IZU9 778 aa13.77□□□□□ -0.21
LCA5-202ENST00000392959 CMTM5Q96DZ9 223 aa13.77□□□□□ -0.21
LCA5-202ENST00000392959 TMA16Q96EY4 203 aaKnown RBP13.77□□□□□ -0.21
LCA5-202ENST00000392959 MRPL1Q9BYD6 325 aaKnown RBP13.77□□□□□ -0.21
LCA5-202ENST00000392959 LACRTQ9GZZ8 138 aa13.77□□□□□ -0.21
LCA5-202ENST00000392959 DMGDHQ9UI17 866 aaKnown RBP13.77□□□□□ -0.21
LCA5-202ENST00000392959 ZNF711Q9Y462 761 aa13.77□□□□□ -0.21
LCA5-202ENST00000392959 LRRIQ3A6PVS8 624 aaPredicted RBP13.77□□□□□ -0.21
LCA5-202ENST00000392959 ADCY3O60266 1144 aa13.77□□□□□ -0.21
LCA5-202ENST00000392959 BAATQ14032 418 aaPredicted RBP13.77□□□□□ -0.21
LCA5-202ENST00000392959 RIT2Q99578 217 aa13.77□□□□□ -0.21
LCA5-202ENST00000392959 RSAD1Q9HA92 442 aa13.77□□□□□ -0.21
LCA5-202ENST00000392959 NOD2Q9HC29 1040 aa13.77□□□□□ -0.21
LCA5-202ENST00000392959 CHCHD3Q9NX63 227 aaKnown RBP13.77□□□□□ -0.21
LCA5-202ENST00000392959 KCNQ2O43526 872 aa13.76□□□□□ -0.21
LCA5-202ENST00000392959 ABCE1P61221 599 aaKnown RBP13.76□□□□□ -0.21
LCA5-202ENST00000392959 ZNF235Q14590 738 aa13.76□□□□□ -0.21
LCA5-202ENST00000392959 TBCCQ15814 346 aa13.76□□□□□ -0.21
LCA5-202ENST00000392959 NBPF20Q3BBV1 942 aa13.76□□□□□ -0.21
LCA5-202ENST00000392959 CYB5D1Q6P9G0 228 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms