RNA–Protein interactions for RNA: ENST00000390468.1

TRAV41-201, Transcript of T cell receptor alpha variable 41, humanhuman

APPRIS P1 BASIC

Gene TRAV41, Length 336 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV41-201ENST00000390468 MAP1SQ66K74 1059 aaPredicted RBP2.83□□□□□ -1.96
TRAV41-201ENST00000390468 ADALQ6DHV7 355 aa2.83□□□□□ -1.96
TRAV41-201ENST00000390468 NXNQ6DKJ4 435 aa2.83□□□□□ -1.96
TRAV41-201ENST00000390468 GALNT17Q6IS24 598 aa2.83□□□□□ -1.96
TRAV41-201ENST00000390468 TMEM53Q6P2H8 277 aa2.83□□□□□ -1.96
TRAV41-201ENST00000390468 KLC3Q6P597 504 aa2.83□□□□□ -1.96
TRAV41-201ENST00000390468 GIMAP6Q6P9H5 292 aa2.83□□□□□ -1.96
TRAV41-201ENST00000390468 OLFM4Q6UX06 510 aa2.83□□□□□ -1.96
TRAV41-201ENST00000390468 MFSD6Q6ZSS7 791 aa2.83□□□□□ -1.96
TRAV41-201ENST00000390468 STOX1Q6ZVD7 989 aa2.83□□□□□ -1.96
TRAV41-201ENST00000390468 NEK10Q6ZWH5 1172 aa2.83□□□□□ -1.96
TRAV41-201ENST00000390468 RSRC2Q7L4I2 434 aaKnown RBP2.83□□□□□ -1.96
TRAV41-201ENST00000390468 CHST3Q7LGC8 479 aa2.83□□□□□ -1.96
TRAV41-201ENST00000390468 MAATS1Q7Z4T9 603 aa2.83□□□□□ -1.96
TRAV41-201ENST00000390468 SRGAP1Q7Z6B7 1085 aa2.83□□□□□ -1.96
TRAV41-201ENST00000390468 ADGRA1Q86SQ6 560 aa2.83□□□□□ -1.96
TRAV41-201ENST00000390468 NT5DC4Q86YG4 428 aa2.83□□□□□ -1.96
TRAV41-201ENST00000390468 CCDC83Q8IWF9 413 aa2.83□□□□□ -1.96
TRAV41-201ENST00000390468 NIM1KQ8IY84 436 aa2.83□□□□□ -1.96
TRAV41-201ENST00000390468 RTKN2Q8IZC4 609 aa2.83□□□□□ -1.96
TRAV41-201ENST00000390468 FUKQ8N0W3 1084 aa2.83□□□□□ -1.96
TRAV41-201ENST00000390468 ARFGAP2Q8N6H7 521 aa2.83□□□□□ -1.96
TRAV41-201ENST00000390468 ANKS4BQ8N8V4 417 aa2.83□□□□□ -1.96
TRAV41-201ENST00000390468 UHMK1Q8TAS1 419 aaKnown RBP2.83□□□□□ -1.96
TRAV41-201ENST00000390468 CAGE1Q8TC20 777 aa2.83□□□□□ -1.96
TRAV41-201ENST00000390468 GIMAP1Q8WWP7 306 aa2.83□□□□□ -1.96
TRAV41-201ENST00000390468 ASB11Q8WXH4 323 aa2.83□□□□□ -1.96
TRAV41-201ENST00000390468 RUBCNQ92622 972 aa2.83□□□□□ -1.96
TRAV41-201ENST00000390468 SLC35B4Q969S0 331 aa2.83□□□□□ -1.96
TRAV41-201ENST00000390468 SKA1Q96BD8 255 aa2.83□□□□□ -1.96
TRAV41-201ENST00000390468 IQCDQ96DY2 449 aa2.83□□□□□ -1.96
TRAV41-201ENST00000390468 VMP1Q96GC9 406 aa2.83□□□□□ -1.96
TRAV41-201ENST00000390468 NAF1Q96HR8 494 aaKnown RBP2.83□□□□□ -1.96
TRAV41-201ENST00000390468 KIRREL1Q96J84 757 aa2.83□□□□□ -1.96
TRAV41-201ENST00000390468 FRMD6Q96NE9 622 aa2.83□□□□□ -1.96
TRAV41-201ENST00000390468 CATSPER2Q96P56 530 aa2.83□□□□□ -1.96
TRAV41-201ENST00000390468 GBP5Q96PP8 586 aa2.83□□□□□ -1.96
TRAV41-201ENST00000390468 STRBPQ96SI9 672 aaKnown RBP2.83□□□□□ -1.96
TRAV41-201ENST00000390468 CGREF1Q99674 301 aa2.83□□□□□ -1.96
TRAV41-201ENST00000390468 CCT7Q99832 543 aa2.83□□□□□ -1.96
TRAV41-201ENST00000390468 RIOK1Q9BRS2 568 aaKnown RBP2.83□□□□□ -1.96
TRAV41-201ENST00000390468 FUCA2Q9BTY2 467 aa2.83□□□□□ -1.96
TRAV41-201ENST00000390468 CCDC28BQ9BUN5 200 aa2.83□□□□□ -1.96
TRAV41-201ENST00000390468 RTFDC1Q9BY42 306 aaPredicted RBP2.83□□□□□ -1.96
TRAV41-201ENST00000390468 KRTAP4-5Q9BYR2 181 aa2.83□□□□□ -1.96
TRAV41-201ENST00000390468 LRRC2Q9BYS8 371 aa2.83□□□□□ -1.96
TRAV41-201ENST00000390468 KRT23Q9C075 422 aa2.83□□□□□ -1.96
TRAV41-201ENST00000390468 TANGO6Q9C0B7 1094 aa2.83□□□□□ -1.96
TRAV41-201ENST00000390468 TGIF2Q9GZN2 237 aa2.83□□□□□ -1.96
TRAV41-201ENST00000390468 DNAI2Q9GZS0 605 aa2.83□□□□□ -1.96
TRAV41-201ENST00000390468 ALDH8A1Q9H2A2 487 aaPredicted RBP2.83□□□□□ -1.96
TRAV41-201ENST00000390468 DHX36Q9H2U1 1008 aaKnown RBP2.83□□□□□ -1.96
TRAV41-201ENST00000390468 GOLPH3LQ9H4A5 285 aa2.83□□□□□ -1.96
TRAV41-201ENST00000390468 NSUN3Q9H649 340 aaKnown RBP2.83□□□□□ -1.96
TRAV41-201ENST00000390468 CCSER2Q9H7U1 834 aa2.83□□□□□ -1.96
TRAV41-201ENST00000390468 CNNM2Q9H8M5 875 aa2.83□□□□□ -1.96
TRAV41-201ENST00000390468 CARS2Q9HA77 564 aaKnown RBP2.83□□□□□ -1.96
TRAV41-201ENST00000390468 IFT122Q9HBG6 1241 aa2.83□□□□□ -1.96
TRAV41-201ENST00000390468 AS3MTQ9HBK9 375 aa2.83□□□□□ -1.96
TRAV41-201ENST00000390468 CBX8Q9HC52 389 aa2.83□□□□□ -1.96
TRAV41-201ENST00000390468 EPB41L4AQ9HCS5 686 aaPredicted RBP2.83□□□□□ -1.96
TRAV41-201ENST00000390468 KRT82Q9NSB4 513 aa2.83□□□□□ -1.96
TRAV41-201ENST00000390468 SDAD1Q9NVU7 687 aaKnown RBP eCLIP2.83□□□□□ -1.96
TRAV41-201ENST00000390468 COMMD8Q9NX08 183 aa2.83□□□□□ -1.96
TRAV41-201ENST00000390468 HOXC10Q9NYD6 342 aa2.83□□□□□ -1.96
TRAV41-201ENST00000390468 CTNNAL1Q9UBT7 734 aa2.83□□□□□ -1.96
TRAV41-201ENST00000390468 PCSK1NQ9UHG2 260 aa2.83□□□□□ -1.96
TRAV41-201ENST00000390468 BAIAP2L1Q9UHR4 511 aa2.83□□□□□ -1.96
TRAV41-201ENST00000390468 SCOCQ9UIL1 159 aa2.83□□□□□ -1.96
TRAV41-201ENST00000390468 HDAC9Q9UKV0 1011 aa2.83□□□□□ -1.96
TRAV41-201ENST00000390468 RAB21Q9UL25 225 aa2.83□□□□□ -1.96
TRAV41-201ENST00000390468 FAM184BQ9ULE4 1060 aa2.83□□□□□ -1.96
TRAV41-201ENST00000390468 TMCC3Q9ULS5 477 aa2.83□□□□□ -1.96
TRAV41-201ENST00000390468 TTF2Q9UNY4 1162 aaKnown RBP2.83□□□□□ -1.96
TRAV41-201ENST00000390468 LIMCH1Q9UPQ0 1083 aa2.83□□□□□ -1.96
TRAV41-201ENST00000390468 CTNND2Q9UQB3 1225 aa2.83□□□□□ -1.96
TRAV41-201ENST00000390468 MAPK8IP1Q9UQF2 711 aa2.83□□□□□ -1.96
TRAV41-201ENST00000390468 R3HDM2Q9Y2K5 976 aaKnown RBP2.83□□□□□ -1.96
TRAV41-201ENST00000390468 C2CD2Q9Y426 696 aa2.83□□□□□ -1.96
TRAV41-201ENST00000390468 TTLL3Q9Y4R7 772 aa2.83□□□□□ -1.96
TRAV41-201ENST00000390468 AK5Q9Y6K8 562 aa2.83□□□□□ -1.96
TRAV41-201ENST00000390468 ARID2Q68CP9 1835 aa2.83□□□□□ -1.96
TRAV41-201ENST00000390468 NCANO14594 1321 aa2.83□□□□□ -1.96
TRAV41-201ENST00000390468 NEDD4P46934 1319 aa2.83□□□□□ -1.96
TRAV41-201ENST00000390468 FAM205AQ6ZU69 1335 aa2.83□□□□□ -1.96
TRAV41-201ENST00000390468 WDR19Q8NEZ3 1342 aa2.83□□□□□ -1.96
TRAV41-201ENST00000390468 MYO3BQ8WXR4 1341 aa2.83□□□□□ -1.96
TRAV41-201ENST00000390468 LCTP09848 1927 aa2.83□□□□□ -1.96
TRAV41-201ENST00000390468 RLFQ13129 1914 aa2.83□□□□□ -1.96
TRAV41-201ENST00000390468 EVPLQ92817 2033 aa2.83□□□□□ -1.96
TRAV41-201ENST00000390468 CTAGE15A4D2H0 777 aa2.82□□□□□ -1.96
TRAV41-201ENST00000390468 VPS37CA5D8V6 355 aaPredicted RBP2.82□□□□□ -1.96
TRAV41-201ENST00000390468 TRIM43BA6NCK2 446 aa2.82□□□□□ -1.96
TRAV41-201ENST00000390468 TMEM247A6NEH6 219 aa2.82□□□□□ -1.96
TRAV41-201ENST00000390468 GSG1L2A8MUP6 293 aa2.82□□□□□ -1.96
TRAV41-201ENST00000390468 EIF1AYO14602 144 aaKnown RBP2.82□□□□□ -1.96
TRAV41-201ENST00000390468 CETN3O15182 167 aa2.82□□□□□ -1.96
TRAV41-201ENST00000390468 FOXP2O15409 715 aa2.82□□□□□ -1.96
TRAV41-201ENST00000390468 FIBPO43427 364 aa2.82□□□□□ -1.96
TRAV41-201ENST00000390468 SLC26A4O43511 780 aa2.82□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms