RNA–Protein interactions for RNA: ENST00000390467.3

TRAV40-201, Transcript of T cell receptor alpha variable 40, humanhuman

APPRIS P1 BASIC

Gene TRAV40, Length 317 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV40-201ENST00000390467 CDC42EP1Q00587 391 aa4.55□□□□□ -1.68
TRAV40-201ENST00000390467 CREMQ03060 361 aa4.55□□□□□ -1.68
TRAV40-201ENST00000390467 IL10RAQ13651 578 aa4.55□□□□□ -1.68
TRAV40-201ENST00000390467 ZNF169Q14929 603 aaPredicted RBP4.55□□□□□ -1.68
TRAV40-201ENST00000390467 CCDC142Q17RM4 750 aa4.55□□□□□ -1.68
TRAV40-201ENST00000390467 SYDE2Q5VT97 1194 aa4.55□□□□□ -1.68
TRAV40-201ENST00000390467 FBXO42Q6P3S6 717 aa4.55□□□□□ -1.68
TRAV40-201ENST00000390467 FOXR2Q6PJQ5 311 aa4.55□□□□□ -1.68
TRAV40-201ENST00000390467 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP4.55□□□□□ -1.68
TRAV40-201ENST00000390467 MIGA2Q7L4E1 593 aa4.55□□□□□ -1.68
TRAV40-201ENST00000390467 SSH3Q8TE77 659 aa4.55□□□□□ -1.68
TRAV40-201ENST00000390467 KAT5Q92993 513 aa4.55□□□□□ -1.68
TRAV40-201ENST00000390467 FAXDC2Q96IV6 333 aa4.55□□□□□ -1.68
TRAV40-201ENST00000390467 CASS4Q9NQ75 786 aa4.55□□□□□ -1.68
TRAV40-201ENST00000390467 TDP1Q9NUW8 608 aa4.55□□□□□ -1.68
TRAV40-201ENST00000390467 TBCCD1Q9NVR7 557 aa4.55□□□□□ -1.68
TRAV40-201ENST00000390467 MKS1Q9NXB0 559 aa4.55□□□□□ -1.68
TRAV40-201ENST00000390467 KCTD5Q9NXV2 234 aa4.55□□□□□ -1.68
TRAV40-201ENST00000390467 FOXJ2Q9P0K8 574 aa4.55□□□□□ -1.68
TRAV40-201ENST00000390467 SERPINB13Q9UIV8 391 aa4.55□□□□□ -1.68
TRAV40-201ENST00000390467 INSL6Q9Y581 213 aa4.55□□□□□ -1.68
TRAV40-201ENST00000390467 SPATA31A6Q5VVP1 1343 aa4.54□□□□□ -1.68
TRAV40-201ENST00000390467 MASP2O00187 686 aa4.54□□□□□ -1.68
TRAV40-201ENST00000390467 GABRDO14764 452 aa4.54□□□□□ -1.68
TRAV40-201ENST00000390467 HTRA2O43464 458 aaPredicted RBP4.54□□□□□ -1.68
TRAV40-201ENST00000390467 ERN1O75460 977 aaKnown RBP4.54□□□□□ -1.68
TRAV40-201ENST00000390467 MYBL2P10244 700 aa4.54□□□□□ -1.68
TRAV40-201ENST00000390467 ZNF37AP17032 561 aaPredicted RBP4.54□□□□□ -1.68
TRAV40-201ENST00000390467 C21orf58P58505 322 aa4.54□□□□□ -1.68
TRAV40-201ENST00000390467 KRTAP1-1Q07627 177 aa4.54□□□□□ -1.68
TRAV40-201ENST00000390467 PCBP2Q15366 365 aaKnown RBP eCLIP4.54□□□□□ -1.68
TRAV40-201ENST00000390467 TEKT5Q96M29 485 aa4.54□□□□□ -1.68
TRAV40-201ENST00000390467 PNKPQ96T60 521 aa4.54□□□□□ -1.68
TRAV40-201ENST00000390467 TLK1Q9UKI8 766 aa4.54□□□□□ -1.68
TRAV40-201ENST00000390467 SLC45A2Q9UMX9 530 aa4.54□□□□□ -1.68
TRAV40-201ENST00000390467 CDYLQ9Y232 598 aa4.54□□□□□ -1.68
TRAV40-201ENST00000390467 COX11Q9Y6N1 276 aa4.54□□□□□ -1.68
TRAV40-201ENST00000390467 MYADML2A6NDP7 307 aa4.53□□□□□ -1.68
TRAV40-201ENST00000390467 CCDC154A6NI56 674 aa4.53□□□□□ -1.68
TRAV40-201ENST00000390467 XPOTO43592 962 aaKnown RBP4.53□□□□□ -1.68
TRAV40-201ENST00000390467 KATNA1O75449 491 aa4.53□□□□□ -1.68
TRAV40-201ENST00000390467 C1QL1O75973 258 aa4.53□□□□□ -1.68
TRAV40-201ENST00000390467 AGFG2O95081 481 aa4.53□□□□□ -1.68
TRAV40-201ENST00000390467 CD1AP06126 327 aa4.53□□□□□ -1.68
TRAV40-201ENST00000390467 MRPS21P82921 87 aaKnown RBP4.53□□□□□ -1.68
TRAV40-201ENST00000390467 FAM50AQ14320 339 aaKnown RBP4.53□□□□□ -1.68
TRAV40-201ENST00000390467 ERCC6LQ2NKX8 1250 aa4.53□□□□□ -1.68
TRAV40-201ENST00000390467 COLEC12Q5KU26 742 aa4.53□□□□□ -1.68
TRAV40-201ENST00000390467 RSPH3Q86UC2 560 aa4.53□□□□□ -1.68
TRAV40-201ENST00000390467 LNX2Q8N448 690 aa4.53□□□□□ -1.68
TRAV40-201ENST00000390467 BOLLQ8N9W6 283 aaKnown RBP4.53□□□□□ -1.68
TRAV40-201ENST00000390467 TMIEQ8NEW7 156 aa4.53□□□□□ -1.68
TRAV40-201ENST00000390467 ACTRT2Q8TDY3 377 aa4.53□□□□□ -1.68
TRAV40-201ENST00000390467 HDAC10Q969S8 669 aa4.53□□□□□ -1.68
TRAV40-201ENST00000390467 TMEM125Q96AQ2 219 aa4.53□□□□□ -1.68
TRAV40-201ENST00000390467 MTMR8Q96EF0 704 aa4.53□□□□□ -1.68
TRAV40-201ENST00000390467 PTCD3Q96EY7 689 aaKnown RBP4.53□□□□□ -1.68
TRAV40-201ENST00000390467 MRGPRX4Q96LA9 322 aa4.53□□□□□ -1.68
TRAV40-201ENST00000390467 KLHL32Q96NJ5 620 aa4.53□□□□□ -1.68
TRAV40-201ENST00000390467 LRFN3Q9BTN0 628 aa4.53□□□□□ -1.68
TRAV40-201ENST00000390467 TMX1Q9H3N1 280 aa4.53□□□□□ -1.68
TRAV40-201ENST00000390467 SAP30BPQ9UHR5 308 aaKnown RBP4.53□□□□□ -1.68
TRAV40-201ENST00000390467 PCDHB1Q9Y5F3 818 aa4.53□□□□□ -1.68
TRAV40-201ENST00000390467 TNFRSF18Q9Y5U5 241 aa4.53□□□□□ -1.68
TRAV40-201ENST00000390467 TRGV11A0A075B6L2 103 aa4.52□□□□□ -1.69
TRAV40-201ENST00000390467 A0A1W2PS29 197 aa4.52□□□□□ -1.69
TRAV40-201ENST00000390467 CDK11BP21127 795 aaKnown RBP4.52□□□□□ -1.69
TRAV40-201ENST00000390467 GUCY2FP51841 1108 aa4.52□□□□□ -1.69
TRAV40-201ENST00000390467 EVA1CP58658 441 aa4.52□□□□□ -1.69
TRAV40-201ENST00000390467 MRPS35P82673 323 aaKnown RBP4.52□□□□□ -1.69
TRAV40-201ENST00000390467 AMPD3Q01432 767 aa4.52□□□□□ -1.69
TRAV40-201ENST00000390467 MC2RQ01718 297 aa4.52□□□□□ -1.69
TRAV40-201ENST00000390467 KIF23Q02241 960 aaPredicted RBP4.52□□□□□ -1.69
TRAV40-201ENST00000390467 TLE1Q04724 770 aa4.52□□□□□ -1.69
TRAV40-201ENST00000390467 SF3B3Q15393 1217 aaKnown RBP4.52□□□□□ -1.69
TRAV40-201ENST00000390467 PABPC1LQ4VXU2 614 aaKnown RBP4.52□□□□□ -1.69
TRAV40-201ENST00000390467 UTP14CQ5TAP6 766 aaKnown RBP4.52□□□□□ -1.69
TRAV40-201ENST00000390467 NLGN4YQ8NFZ3 816 aaPredicted RBP4.52□□□□□ -1.69
TRAV40-201ENST00000390467 SLC9A6Q92581 669 aa4.52□□□□□ -1.69
TRAV40-201ENST00000390467 COA7Q96BR5 231 aa4.52□□□□□ -1.69
TRAV40-201ENST00000390467 PDLIM2Q96JY6 352 aa4.52□□□□□ -1.69
TRAV40-201ENST00000390467 MED15Q96RN5 788 aa4.52□□□□□ -1.69
TRAV40-201ENST00000390467 DMRTA2Q96SC8 542 aa4.52□□□□□ -1.69
TRAV40-201ENST00000390467 RSAD1Q9HA92 442 aa4.52□□□□□ -1.69
TRAV40-201ENST00000390467 KIAA1586Q9HCI6 787 aa4.52□□□□□ -1.69
TRAV40-201ENST00000390467 CTTNBP2NLQ9P2B4 639 aa4.52□□□□□ -1.69
TRAV40-201ENST00000390467 SBNO2Q9Y2G9 1366 aa4.52□□□□□ -1.69
TRAV40-201ENST00000390467 KLHL33A6NCF5 533 aa4.51□□□□□ -1.69
TRAV40-201ENST00000390467 SGTAO43765 313 aa4.51□□□□□ -1.69
TRAV40-201ENST00000390467 SLC43A1O75387 559 aa4.51□□□□□ -1.69
TRAV40-201ENST00000390467 RARRES1P49788 294 aa4.51□□□□□ -1.69
TRAV40-201ENST00000390467 SLC16A1P53985 500 aa4.51□□□□□ -1.69
TRAV40-201ENST00000390467 ITKQ08881 620 aa4.51□□□□□ -1.69
TRAV40-201ENST00000390467 ODF1Q14990 250 aa4.51□□□□□ -1.69
TRAV40-201ENST00000390467 ATP2B3Q16720 1220 aa4.51□□□□□ -1.69
TRAV40-201ENST00000390467 SYCE2Q6PIF2 218 aa4.51□□□□□ -1.69
TRAV40-201ENST00000390467 ZNF365Q70YC5 407 aa4.51□□□□□ -1.69
TRAV40-201ENST00000390467 COLGALT2Q8IYK4 626 aa4.51□□□□□ -1.69
TRAV40-201ENST00000390467 PRPF38AQ8NAV1 312 aaKnown RBP4.51□□□□□ -1.69
TRAV40-201ENST00000390467 NSUN7Q8NE18 718 aaKnown RBP4.51□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms