RNA–Protein interactions for RNA: ENST00000390454.2

TRAV25-201, Transcript of T cell receptor alpha variable 25, humanhuman

APPRIS P1 BASIC

Gene TRAV25, Length 403 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV25-201ENST00000390454 TMEM139Q8IV31 216 aa6.88□□□□□ -1.31
TRAV25-201ENST00000390454 COLGALT2Q8IYK4 626 aa6.88□□□□□ -1.31
TRAV25-201ENST00000390454 NLGN4XQ8N0W4 816 aa6.88□□□□□ -1.31
TRAV25-201ENST00000390454 USHBP1Q8N6Y0 703 aa6.88□□□□□ -1.31
TRAV25-201ENST00000390454 ZNF527Q8NB42 609 aa6.88□□□□□ -1.31
TRAV25-201ENST00000390454 C2CD4AQ8NCU7 369 aaPredicted RBP6.88□□□□□ -1.31
TRAV25-201ENST00000390454 MSANTD4Q8NCY6 345 aa6.88□□□□□ -1.31
TRAV25-201ENST00000390454 CNNM3Q8NE01 707 aa6.88□□□□□ -1.31
TRAV25-201ENST00000390454 CTCFLQ8NI51 663 aaPredicted RBP6.88□□□□□ -1.31
TRAV25-201ENST00000390454 FAM71BQ8TC56 605 aa6.88□□□□□ -1.31
TRAV25-201ENST00000390454 TRAPPC12Q8WVT3 735 aa6.88□□□□□ -1.31
TRAV25-201ENST00000390454 USP13Q92995 863 aaPredicted RBP6.88□□□□□ -1.31
TRAV25-201ENST00000390454 SMARCE1Q969G3 411 aa6.88□□□□□ -1.31
TRAV25-201ENST00000390454 TMEM41AQ96HV5 264 aa6.88□□□□□ -1.31
TRAV25-201ENST00000390454 SEC62Q99442 399 aaKnown RBP6.88□□□□□ -1.31
TRAV25-201ENST00000390454 DBNDD2Q9BQY9 259 aa6.88□□□□□ -1.31
TRAV25-201ENST00000390454 JAM3Q9BX67 310 aa6.88□□□□□ -1.31
TRAV25-201ENST00000390454 HDAC8Q9BY41 377 aa6.88□□□□□ -1.31
TRAV25-201ENST00000390454 LRRC2Q9BYS8 371 aa6.88□□□□□ -1.31
TRAV25-201ENST00000390454 VIPAS39Q9H9C1 493 aa6.88□□□□□ -1.31
TRAV25-201ENST00000390454 DCP1AQ9NPI6 582 aaPredicted RBP6.88□□□□□ -1.31
TRAV25-201ENST00000390454 CEP83Q9Y592 693 aa6.88□□□□□ -1.31
TRAV25-201ENST00000390454 CPDO75976 1380 aa6.87□□□□□ -1.31
TRAV25-201ENST00000390454 WDR17Q8IZU2 1322 aa6.87□□□□□ -1.31
TRAV25-201ENST00000390454 STK36Q9NRP7 1315 aa6.87□□□□□ -1.31
TRAV25-201ENST00000390454 KLF18A0A0U1RQI7 1052 aa6.87□□□□□ -1.31
TRAV25-201ENST00000390454 CTAGE9A4FU28 777 aa6.87□□□□□ -1.31
TRAV25-201ENST00000390454 RRN3P2A6NIE6 340 aa6.87□□□□□ -1.31
TRAV25-201ENST00000390454 MYO1CO00159 1063 aa6.87□□□□□ -1.31
TRAV25-201ENST00000390454 NCK2O43639 380 aa6.87□□□□□ -1.31
TRAV25-201ENST00000390454 MAFKO60675 156 aa6.87□□□□□ -1.31
TRAV25-201ENST00000390454 PPFIA3O75145 1194 aa6.87□□□□□ -1.31
TRAV25-201ENST00000390454 SKAP2O75563 359 aaPredicted RBP6.87□□□□□ -1.31
TRAV25-201ENST00000390454 AMY2AP04746 511 aa6.87□□□□□ -1.31
TRAV25-201ENST00000390454 IFIT1P09914 478 aaKnown RBP6.87□□□□□ -1.31
TRAV25-201ENST00000390454 CLEC2LP0C7M8 214 aa6.87□□□□□ -1.31
TRAV25-201ENST00000390454 ZNF18P17022 549 aa6.87□□□□□ -1.31
TRAV25-201ENST00000390454 AMY2BP19961 511 aa6.87□□□□□ -1.31
TRAV25-201ENST00000390454 BCL6P41182 706 aa6.87□□□□□ -1.31
TRAV25-201ENST00000390454 MAGEA9P43362 315 aa6.87□□□□□ -1.31
TRAV25-201ENST00000390454 GUCY1B3Q02153 619 aa6.87□□□□□ -1.31
TRAV25-201ENST00000390454 LAPTM5Q13571 262 aa6.87□□□□□ -1.31
TRAV25-201ENST00000390454 MYBPC2Q14324 1141 aa6.87□□□□□ -1.31
TRAV25-201ENST00000390454 TMEM132BQ14DG7 1078 aa6.87□□□□□ -1.31
TRAV25-201ENST00000390454 SNX17Q15036 470 aa6.87□□□□□ -1.31
TRAV25-201ENST00000390454 EPHA7Q15375 998 aa6.87□□□□□ -1.31
TRAV25-201ENST00000390454 SFRP5Q5T4F7 317 aa6.87□□□□□ -1.31
TRAV25-201ENST00000390454 NT5DC1Q5TFE4 455 aa6.87□□□□□ -1.31
TRAV25-201ENST00000390454 ANKRD34AQ69YU3 496 aa6.87□□□□□ -1.31
TRAV25-201ENST00000390454 RETSATQ6NUM9 610 aa6.87□□□□□ -1.31
TRAV25-201ENST00000390454 ESRP1Q6NXG1 681 aaKnown RBP6.87□□□□□ -1.31
TRAV25-201ENST00000390454 CCDC62Q6P9F0 684 aa6.87□□□□□ -1.31
TRAV25-201ENST00000390454 ZNF790Q6PG37 636 aa6.87□□□□□ -1.31
TRAV25-201ENST00000390454 C1orf122Q6ZSJ8 110 aa6.87□□□□□ -1.31
TRAV25-201ENST00000390454 NOSTRINQ8IVI9 506 aa6.87□□□□□ -1.31
TRAV25-201ENST00000390454 MB21D2Q8IYB1 491 aaPredicted RBP6.87□□□□□ -1.31
TRAV25-201ENST00000390454 MARCH10Q8NA82 808 aaPredicted RBP6.87□□□□□ -1.31
TRAV25-201ENST00000390454 NEK11Q8NG66 645 aa6.87□□□□□ -1.31
TRAV25-201ENST00000390454 PLBD2Q8NHP8 589 aa6.87□□□□□ -1.31
TRAV25-201ENST00000390454 CCDC12Q8WUD4 166 aaPredicted RBP6.87□□□□□ -1.31
TRAV25-201ENST00000390454 FERMT2Q96AC1 680 aa6.87□□□□□ -1.31
TRAV25-201ENST00000390454 EDC3Q96F86 508 aaKnown RBP6.87□□□□□ -1.31
TRAV25-201ENST00000390454 ZNF496Q96IT1 587 aaPredicted RBP6.87□□□□□ -1.31
TRAV25-201ENST00000390454 UBXN10Q96LJ8 280 aa6.87□□□□□ -1.31
TRAV25-201ENST00000390454 LRFN3Q9BTN0 628 aa6.87□□□□□ -1.31
TRAV25-201ENST00000390454 SLC26A6Q9BXS9 759 aa6.87□□□□□ -1.31
TRAV25-201ENST00000390454 WNT8AQ9H1J5 351 aa6.87□□□□□ -1.31
TRAV25-201ENST00000390454 HSD3B7Q9H2F3 369 aa6.87□□□□□ -1.31
TRAV25-201ENST00000390454 RAI14Q9P0K7 980 aa6.87□□□□□ -1.31
TRAV25-201ENST00000390454 GJD2Q9UKL4 321 aa6.87□□□□□ -1.31
TRAV25-201ENST00000390454 B3GALT1Q9Y5Z6 326 aa6.87□□□□□ -1.31
TRAV25-201ENST00000390454 ADAMTS7Q9UKP4 1686 aa6.87□□□□□ -1.31
TRAV25-201ENST00000390454 MAST3O60307 1309 aa6.86□□□□□ -1.31
TRAV25-201ENST00000390454 LAMA4Q16363 1823 aa6.86□□□□□ -1.31
TRAV25-201ENST00000390454 K7ENM7 598 aa6.86□□□□□ -1.31
TRAV25-201ENST00000390454 RNF225M0QZC1 329 aaPredicted RBP6.86□□□□□ -1.31
TRAV25-201ENST00000390454 NPHS1O60500 1241 aa6.86□□□□□ -1.31
TRAV25-201ENST00000390454 SEC31AO94979 1220 aaKnown RBP6.86□□□□□ -1.31
TRAV25-201ENST00000390454 WISP1O95388 367 aa6.86□□□□□ -1.31
TRAV25-201ENST00000390454 CBX7O95931 251 aa6.86□□□□□ -1.31
TRAV25-201ENST00000390454 BMP15O95972 392 aa6.86□□□□□ -1.31
TRAV25-201ENST00000390454 DHRS4L1P0CG22 281 aa6.86□□□□□ -1.31
TRAV25-201ENST00000390454 ATP1A3P13637 1013 aa6.86□□□□□ -1.31
TRAV25-201ENST00000390454 ENDOUP21128 410 aaKnown RBP6.86□□□□□ -1.31
TRAV25-201ENST00000390454 PLCD1P51178 756 aa6.86□□□□□ -1.31
TRAV25-201ENST00000390454 MANFP55145 182 aaKnown RBP6.86□□□□□ -1.31
TRAV25-201ENST00000390454 GRM1Q13255 1194 aa6.86□□□□□ -1.31
TRAV25-201ENST00000390454 PTPAQ15257 358 aa6.86□□□□□ -1.31
TRAV25-201ENST00000390454 FAM133BQ5BKY9 247 aaKnown RBP6.86□□□□□ -1.31
TRAV25-201ENST00000390454 FIGNQ5HY92 759 aa6.86□□□□□ -1.31
TRAV25-201ENST00000390454 EPHA10Q5JZY3 1008 aa6.86□□□□□ -1.31
TRAV25-201ENST00000390454 TTC39AQ5SRH9 613 aa6.86□□□□□ -1.31
TRAV25-201ENST00000390454 BEND6Q5SZJ8 279 aaPredicted RBP6.86□□□□□ -1.31
TRAV25-201ENST00000390454 FAM180BQ6P0A1 224 aa6.86□□□□□ -1.31
TRAV25-201ENST00000390454 C4orf50Q6ZRC1 276 aa6.86□□□□□ -1.31
TRAV25-201ENST00000390454 RFX8Q6ZV50 586 aa6.86□□□□□ -1.31
TRAV25-201ENST00000390454 COPS6Q7L5N1 327 aa6.86□□□□□ -1.31
TRAV25-201ENST00000390454 CPNE8Q86YQ8 564 aa6.86□□□□□ -1.31
TRAV25-201ENST00000390454 TMTC1Q8IUR5 882 aa6.86□□□□□ -1.31
TRAV25-201ENST00000390454 CNGA4Q8IV77 575 aa6.86□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms