RNA–Protein interactions for RNA: ENST00000389757.7

PKP4-201, Transcript of plakophilin 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PKP4, Length 5,777 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-201ENST00000389757 YWHAHQ04917 246 aaPredicted RBP10.83□□□□□ -0.68
PKP4-201ENST00000389757 ACVR2BQ13705 512 aa10.83□□□□□ -0.68
PKP4-201ENST00000389757 TAF2Q6P1X5 1199 aa10.83□□□□□ -0.68
PKP4-201ENST00000389757 NIPA1Q7RTP0 329 aa10.83□□□□□ -0.68
PKP4-201ENST00000389757 ATPAF2Q8N5M1 289 aa10.83□□□□□ -0.68
PKP4-201ENST00000389757 C1orf54Q8WWF1 131 aa10.83□□□□□ -0.68
PKP4-201ENST00000389757 DBR1Q9UK59 544 aaKnown RBP10.83□□□□□ -0.68
PKP4-201ENST00000389757 EEF2KO00418 725 aaKnown RBP10.83□□□□□ -0.68
PKP4-201ENST00000389757 PQBP1O60828 265 aaKnown RBP10.83□□□□□ -0.68
PKP4-201ENST00000389757 ZC3H11AO75152 810 aaKnown RBP eCLIP10.83□□□□□ -0.683e-6■■■■□ 22.3
PKP4-201ENST00000389757 GRAP2O75791 330 aa10.83□□□□□ -0.68
PKP4-201ENST00000389757 URODP06132 367 aa10.83□□□□□ -0.68
PKP4-201ENST00000389757 TAL1P17542 331 aaPredicted RBP10.83□□□□□ -0.68
PKP4-201ENST00000389757 NNTQ13423 1086 aa10.83□□□□□ -0.68
PKP4-201ENST00000389757 RCN2Q14257 317 aa10.83□□□□□ -0.68
PKP4-201ENST00000389757 DCAF6Q58WW2 860 aa10.83□□□□□ -0.68
PKP4-201ENST00000389757 C10orf120Q5SQS8 335 aa10.83□□□□□ -0.68
PKP4-201ENST00000389757 DDX55Q8NHQ9 600 aaKnown RBP eCLIP10.83□□□□□ -0.684e-6■■■□□ 16.3
PKP4-201ENST00000389757 LRGUKQ96M69 825 aa10.83□□□□□ -0.68
PKP4-201ENST00000389757 MUC3BQ9H195 1237 aa10.83□□□□□ -0.68
PKP4-201ENST00000389757 TXNDC9O14530 226 aa10.83□□□□□ -0.68
PKP4-201ENST00000389757 THP07101 528 aa10.83□□□□□ -0.68
PKP4-201ENST00000389757 CUL2Q13617 745 aa10.83□□□□□ -0.68
PKP4-201ENST00000389757 GIT2Q14161 759 aa10.83□□□□□ -0.68
PKP4-201ENST00000389757 MFSD10Q14728 455 aa10.83□□□□□ -0.68
PKP4-201ENST00000389757 NTRK3Q16288 839 aa10.83□□□□□ -0.68
PKP4-201ENST00000389757 PKN1Q16512 942 aa10.83□□□□□ -0.68
PKP4-201ENST00000389757 TTC19Q6DKK2 380 aaPredicted RBP10.83□□□□□ -0.68
PKP4-201ENST00000389757 IL31Q6EBC2 164 aa10.83□□□□□ -0.68
PKP4-201ENST00000389757 RGMBQ6NW40 437 aa10.83□□□□□ -0.68
PKP4-201ENST00000389757 DEFB128Q7Z7B8 93 aa10.83□□□□□ -0.68
PKP4-201ENST00000389757 PGBD3Q8N328 593 aa10.83□□□□□ -0.68
PKP4-201ENST00000389757 CCDC197Q8NCU1 140 aa10.83□□□□□ -0.68
PKP4-201ENST00000389757 CFAP61Q8NHU2 1237 aa10.83□□□□□ -0.68
PKP4-201ENST00000389757 SLC35G2Q8TBE7 412 aa10.83□□□□□ -0.68
PKP4-201ENST00000389757 RNPC3Q96LT9 517 aaKnown RBP10.83□□□□□ -0.68
PKP4-201ENST00000389757 RNF208Q9H0X6 261 aa10.83□□□□□ -0.68
PKP4-201ENST00000389757 A1CFQ9NQ94 594 aaKnown RBP10.83□□□□□ -0.68
PKP4-201ENST00000389757 HACD3Q9P035 362 aa10.83□□□□□ -0.68
PKP4-201ENST00000389757 WDR91A4D1P6 747 aa10.83□□□□□ -0.68
PKP4-201ENST00000389757 IRF6O14896 467 aa10.83□□□□□ -0.68
PKP4-201ENST00000389757 KLHDC7AQ5VTJ3 777 aa10.83□□□□□ -0.68
PKP4-201ENST00000389757 IQSEC1Q6DN90 963 aa10.83□□□□□ -0.68
PKP4-201ENST00000389757 CATSPERGQ6ZRH7 1159 aa10.83□□□□□ -0.68
PKP4-201ENST00000389757 N4BP2L2Q92802 583 aaPredicted RBP10.83□□□□□ -0.68
PKP4-201ENST00000389757 ENTPD7Q9NQZ7 604 aa10.83□□□□□ -0.68
PKP4-201ENST00000389757 PI4K2BG5E9Z4 385 aa10.82□□□□□ -0.68
PKP4-201ENST00000389757 FKBP1BP68106 108 aa10.82□□□□□ -0.68
PKP4-201ENST00000389757 CNTN2Q02246 1040 aa10.82□□□□□ -0.68
PKP4-201ENST00000389757 LAMTOR4Q0VGL1 99 aa10.82□□□□□ -0.68
PKP4-201ENST00000389757 CRY2Q49AN0 593 aa10.82□□□□□ -0.68
PKP4-201ENST00000389757 CBWD2Q8IUF1 395 aa10.82□□□□□ -0.68
PKP4-201ENST00000389757 LMNTD2Q8IXW0 634 aa10.82□□□□□ -0.68
PKP4-201ENST00000389757 REPS2Q8NFH8 660 aa10.82□□□□□ -0.68
PKP4-201ENST00000389757 SNF8Q96H20 258 aa10.82□□□□□ -0.68
PKP4-201ENST00000389757 VPS11Q9H270 941 aa10.82□□□□□ -0.68
PKP4-201ENST00000389757 KLHL11Q9NVR0 708 aa10.82□□□□□ -0.68
PKP4-201ENST00000389757 C3orf70A6NLC5 250 aaPredicted RBP10.82□□□□□ -0.68
PKP4-201ENST00000389757 TTC4O95801 387 aa10.82□□□□□ -0.68
PKP4-201ENST00000389757 BRD2P25440 801 aaKnown RBP10.82□□□□□ -0.68
PKP4-201ENST00000389757 CHSY1Q86X52 802 aa10.82□□□□□ -0.68
PKP4-201ENST00000389757 RIOX2Q8IUF8 465 aa10.82□□□□□ -0.68
PKP4-201ENST00000389757 PPM1NQ8N819 430 aa10.82□□□□□ -0.68
PKP4-201ENST00000389757 RAPGEF5Q92565 580 aa10.82□□□□□ -0.68
PKP4-201ENST00000389757 SDCCAG3Q96C92 435 aa10.82□□□□□ -0.68
PKP4-201ENST00000389757 CPB2Q96IY4 423 aa10.82□□□□□ -0.68
PKP4-201ENST00000389757 CATSPERBQ9H7T0 1116 aa10.82□□□□□ -0.68
PKP4-201ENST00000389757 AGPAT5Q9NUQ2 364 aa10.82□□□□□ -0.68
PKP4-201ENST00000389757 HSPA4LO95757 839 aa10.82□□□□□ -0.68
PKP4-201ENST00000389757 NCAM1P13591 858 aa10.82□□□□□ -0.68
PKP4-201ENST00000389757 GPD1P21695 349 aa10.82□□□□□ -0.68
PKP4-201ENST00000389757 GUCY2CP25092 1073 aa10.82□□□□□ -0.68
PKP4-201ENST00000389757 PDIA2Q13087 525 aaKnown RBP10.82□□□□□ -0.68
PKP4-201ENST00000389757 NOGQ13253 232 aa10.82□□□□□ -0.68
PKP4-201ENST00000389757 NR1I3Q14994 352 aa10.82□□□□□ -0.68
PKP4-201ENST00000389757 MTMR12Q9C0I1 747 aa10.82□□□□□ -0.68
PKP4-201ENST00000389757 TMEM117Q9H0C3 514 aa10.82□□□□□ -0.68
PKP4-201ENST00000389757 DSEQ9UL01 958 aa10.82□□□□□ -0.68
PKP4-201ENST00000389757 UBA6A0AVT1 1052 aaPredicted RBP10.82□□□□□ -0.68
PKP4-201ENST00000389757 WTIPA6NIX2 430 aaPredicted RBP10.82□□□□□ -0.68
PKP4-201ENST00000389757 RAB27AP51159 221 aa10.82□□□□□ -0.68
PKP4-201ENST00000389757 NR1H3Q13133 447 aa10.82□□□□□ -0.68
PKP4-201ENST00000389757 NAB2Q15742 525 aa10.82□□□□□ -0.68
PKP4-201ENST00000389757 FSCN1Q16658 493 aaKnown RBP10.82□□□□□ -0.68
PKP4-201ENST00000389757 CYP4A22Q5TCH4 519 aa10.82□□□□□ -0.68
PKP4-201ENST00000389757 TTC30BQ8N4P2 665 aa10.82□□□□□ -0.68
PKP4-201ENST00000389757 TRPM4Q8TD43 1214 aa10.82□□□□□ -0.68
PKP4-201ENST00000389757 PABPC5Q96DU9 382 aaKnown RBP10.82□□□□□ -0.68
PKP4-201ENST00000389757 OLA1Q9NTK5 396 aaKnown RBP10.82□□□□□ -0.68
PKP4-201ENST00000389757 TMEM39AQ9NV64 488 aa10.82□□□□□ -0.68
PKP4-201ENST00000389757 PPP1R3GB7ZBB8 358 aa10.82□□□□□ -0.68
PKP4-201ENST00000389757 AP3B1O00203 1094 aa10.82□□□□□ -0.68
PKP4-201ENST00000389757 CYB561D2O14569 222 aa10.82□□□□□ -0.68
PKP4-201ENST00000389757 KCNN4O15554 427 aa10.82□□□□□ -0.68
PKP4-201ENST00000389757 TOB1P50616 345 aaPredicted RBP10.82□□□□□ -0.68
PKP4-201ENST00000389757 ARSEP51690 589 aa10.82□□□□□ -0.68
PKP4-201ENST00000389757 GRIK5Q16478 980 aa10.82□□□□□ -0.68
PKP4-201ENST00000389757 IZUMO3Q5VZ72 239 aa10.82□□□□□ -0.68
PKP4-201ENST00000389757 PHLDB3Q6NSJ2 640 aa10.82□□□□□ -0.68
PKP4-201ENST00000389757 PPP1R12CQ9BZL4 782 aa10.82□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms