RNA–Protein interactions for RNA: ENST00000389645.7

CAPRIN1-202, Transcript of cell cycle associated protein 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CAPRIN1, Length 3,498 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPRIN1-202ENST00000389645 TTC27Q6P3X3 843 aa12.87□□□□□ -0.35
CAPRIN1-202ENST00000389645 LRIG3Q6UXM1 1119 aa12.87□□□□□ -0.35
CAPRIN1-202ENST00000389645 PRUNE1Q86TP1 453 aa12.87□□□□□ -0.35
CAPRIN1-202ENST00000389645 LMO3Q8TAP4 145 aa12.87□□□□□ -0.35
CAPRIN1-202ENST00000389645 ACSF2Q96CM8 615 aaPredicted RBP12.87□□□□□ -0.35
CAPRIN1-202ENST00000389645 THAP12O43422 761 aa12.87□□□□□ -0.35
CAPRIN1-202ENST00000389645 KIF1CO43896 1103 aaKnown RBP12.87□□□□□ -0.35
CAPRIN1-202ENST00000389645 KRT17Q04695 432 aa12.87□□□□□ -0.35
CAPRIN1-202ENST00000389645 SCARA5Q6ZMJ2 495 aa12.87□□□□□ -0.35
CAPRIN1-202ENST00000389645 TMEM161BQ8NDZ6 487 aa12.87□□□□□ -0.35
CAPRIN1-202ENST00000389645 COPS5Q92905 334 aa12.87□□□□□ -0.35
CAPRIN1-202ENST00000389645 CDHR1Q96JP9 859 aa12.87□□□□□ -0.35
CAPRIN1-202ENST00000389645 TTC7AQ9ULT0 858 aaPredicted RBP12.87□□□□□ -0.35
CAPRIN1-202ENST00000389645 NCANO14594 1321 aa12.87□□□□□ -0.35
CAPRIN1-202ENST00000389645 K7ERI5 159 aa12.87□□□□□ -0.35
CAPRIN1-202ENST00000389645 FAM107AO95990 144 aa12.87□□□□□ -0.35
CAPRIN1-202ENST00000389645 RFX1P22670 979 aa12.87□□□□□ -0.35
CAPRIN1-202ENST00000389645 DHX34Q14147 1143 aaKnown RBP12.87□□□□□ -0.35
CAPRIN1-202ENST00000389645 CDR2LQ86X02 465 aaPredicted RBP12.87□□□□□ -0.35
CAPRIN1-202ENST00000389645 CEP57Q86XR8 500 aa12.87□□□□□ -0.35
CAPRIN1-202ENST00000389645 SLC9A9Q8IVB4 645 aa12.87□□□□□ -0.35
CAPRIN1-202ENST00000389645 FBXO16Q8IX29 292 aaPredicted RBP12.87□□□□□ -0.35
CAPRIN1-202ENST00000389645 GPD1LQ8N335 351 aa12.87□□□□□ -0.35
CAPRIN1-202ENST00000389645 GDAP1Q8TB36 358 aa12.87□□□□□ -0.35
CAPRIN1-202ENST00000389645 FGD4Q96M96 766 aa12.87□□□□□ -0.35
CAPRIN1-202ENST00000389645 PPP1R16BQ96T49 567 aa12.87□□□□□ -0.35
CAPRIN1-202ENST00000389645 MMP19Q99542 508 aa12.87□□□□□ -0.35
CAPRIN1-202ENST00000389645 ELAC2Q9BQ52 826 aaKnown RBP12.87□□□□□ -0.35
CAPRIN1-202ENST00000389645 TMEM8AQ9HCN3 771 aa12.87□□□□□ -0.35
CAPRIN1-202ENST00000389645 PDGFCQ9NRA1 345 aa12.87□□□□□ -0.35
CAPRIN1-202ENST00000389645 SBDSQ9Y3A5 250 aaKnown RBP eCLIP12.87□□□□□ -0.35
CAPRIN1-202ENST00000389645 PDHXO00330 501 aa12.86□□□□□ -0.35
CAPRIN1-202ENST00000389645 CELF2O95319 508 aaKnown RBP12.86□□□□□ -0.35
CAPRIN1-202ENST00000389645 GGPS1O95749 300 aa12.86□□□□□ -0.35
CAPRIN1-202ENST00000389645 CHRNB2P17787 502 aa12.86□□□□□ -0.35
CAPRIN1-202ENST00000389645 COILP38432 576 aaPredicted RBP12.86□□□□□ -0.35
CAPRIN1-202ENST00000389645 GTF2BQ00403 316 aa12.86□□□□□ -0.35
CAPRIN1-202ENST00000389645 KCTD2Q14681 263 aa12.86□□□□□ -0.35
CAPRIN1-202ENST00000389645 QPCTQ16769 361 aa12.86□□□□□ -0.35
CAPRIN1-202ENST00000389645 TRIM50Q86XT4 487 aa12.86□□□□□ -0.35
CAPRIN1-202ENST00000389645 DDX23Q9BUQ8 820 aaKnown RBP12.86□□□□□ -0.35
CAPRIN1-202ENST00000389645 TARS2Q9BW92 718 aaKnown RBP12.86□□□□□ -0.35
CAPRIN1-202ENST00000389645 STRA6Q9BX79 667 aa12.86□□□□□ -0.35
CAPRIN1-202ENST00000389645 IMPG2Q9BZV3 1241 aa12.86□□□□□ -0.35
CAPRIN1-202ENST00000389645 WNT8AQ9H1J5 351 aa12.86□□□□□ -0.35
CAPRIN1-202ENST00000389645 PABPC3Q9H361 631 aaKnown RBP12.86□□□□□ -0.35
CAPRIN1-202ENST00000389645 WDR3Q9UNX4 943 aaKnown RBP eCLIP12.86□□□□□ -0.35
CAPRIN1-202ENST00000389645 DIS3Q9Y2L1 958 aaKnown RBP12.86□□□□□ -0.35
CAPRIN1-202ENST00000389645 BRCA2P51587 3418 aa12.86□□□□□ -0.35
CAPRIN1-202ENST00000389645 FAM187AA6NFU0 413 aa12.86□□□□□ -0.35
CAPRIN1-202ENST00000389645 EIF4E1BA6NMX2 242 aaKnown RBP12.86□□□□□ -0.35
CAPRIN1-202ENST00000389645 SOCS7O14512 581 aa12.86□□□□□ -0.35
CAPRIN1-202ENST00000389645 KIAA0391O15091 583 aaKnown RBP12.86□□□□□ -0.35
CAPRIN1-202ENST00000389645 SUPT20HL2P0C7V6 817 aa12.86□□□□□ -0.35
CAPRIN1-202ENST00000389645 CTNNA2P26232 953 aa12.86□□□□□ -0.35
CAPRIN1-202ENST00000389645 CDR2Q01850 454 aa12.86□□□□□ -0.35
CAPRIN1-202ENST00000389645 GJC2Q5T442 439 aaPredicted RBP12.86□□□□□ -0.35
CAPRIN1-202ENST00000389645 MIS18BP1Q6P0N0 1132 aa12.86□□□□□ -0.35
CAPRIN1-202ENST00000389645 DCUN1D2Q6PH85 259 aa12.86□□□□□ -0.35
CAPRIN1-202ENST00000389645 ANKEF1Q9NU02 776 aa12.86□□□□□ -0.35
CAPRIN1-202ENST00000389645 ADAM22Q9P0K1 906 aa12.86□□□□□ -0.35
CAPRIN1-202ENST00000389645 CCL15-CCL14A0A0B4J2E2 113 aa12.86□□□□□ -0.35
CAPRIN1-202ENST00000389645 BTBD19C9JJ37 291 aa12.86□□□□□ -0.35
CAPRIN1-202ENST00000389645 PODXLO00592 558 aa12.86□□□□□ -0.35
CAPRIN1-202ENST00000389645 PPP1R12AO14974 1030 aaPredicted RBP12.86□□□□□ -0.35
CAPRIN1-202ENST00000389645 GAS8O95995 478 aa12.86□□□□□ -0.35
CAPRIN1-202ENST00000389645 SRGAP2CP0DJJ0 459 aa12.86□□□□□ -0.35
CAPRIN1-202ENST00000389645 CD19P15391 556 aa12.86□□□□□ -0.35
CAPRIN1-202ENST00000389645 CCL15Q16663 113 aa12.86□□□□□ -0.35
CAPRIN1-202ENST00000389645 KYNUQ16719 465 aa12.86□□□□□ -0.35
CAPRIN1-202ENST00000389645 C1orf220Q5T0J3 134 aa12.86□□□□□ -0.35
CAPRIN1-202ENST00000389645 DUPD1Q68J44 220 aa12.86□□□□□ -0.35
CAPRIN1-202ENST00000389645 SUGP1Q8IWZ8 645 aaKnown RBP12.86□□□□□ -0.35
CAPRIN1-202ENST00000389645 FAM71AQ8IYT1 594 aa12.86□□□□□ -0.35
CAPRIN1-202ENST00000389645 THOC1Q96FV9 657 aaKnown RBP12.86□□□□□ -0.35
CAPRIN1-202ENST00000389645 C9orf72Q96LT7 481 aa12.86□□□□□ -0.35
CAPRIN1-202ENST00000389645 PRMT1Q99873 361 aaKnown RBP12.86□□□□□ -0.35
CAPRIN1-202ENST00000389645 SENP7Q9BQF6 1050 aa12.86□□□□□ -0.35
CAPRIN1-202ENST00000389645 MSTO1Q9BUK6 570 aa12.86□□□□□ -0.35
CAPRIN1-202ENST00000389645 XPNPEP1Q9NQW7 623 aa12.86□□□□□ -0.35
CAPRIN1-202ENST00000389645 ZNF302Q9NR11 478 aa12.86□□□□□ -0.35
CAPRIN1-202ENST00000389645 CYP26B1Q9NR63 512 aa12.86□□□□□ -0.35
CAPRIN1-202ENST00000389645 CHST7Q9NS84 486 aa12.86□□□□□ -0.35
CAPRIN1-202ENST00000389645 IRAK4Q9NWZ3 460 aa12.86□□□□□ -0.35
CAPRIN1-202ENST00000389645 CHADLQ6NUI6 762 aa12.85□□□□□ -0.35
CAPRIN1-202ENST00000389645 CD302Q8IX05 232 aa12.85□□□□□ -0.35
CAPRIN1-202ENST00000389645 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP12.85□□□□□ -0.353e-6■■■■■ 50.8
CAPRIN1-202ENST00000389645 MS4A4AQ96JQ5 239 aa12.85□□□□□ -0.35
CAPRIN1-202ENST00000389645 ATP6V0A4Q9HBG4 840 aa12.85□□□□□ -0.35
CAPRIN1-202ENST00000389645 SAMD15Q9P1V8 674 aa12.85□□□□□ -0.35
CAPRIN1-202ENST00000389645 MCM3APO60318 1980 aa12.85□□□□□ -0.35
CAPRIN1-202ENST00000389645 HLA-DRAP01903 254 aa12.85□□□□□ -0.35
CAPRIN1-202ENST00000389645 KRT19P08727 400 aa12.85□□□□□ -0.35
CAPRIN1-202ENST00000389645 ATF2P15336 505 aa12.85□□□□□ -0.35
CAPRIN1-202ENST00000389645 EIF3BP55884 814 aaKnown RBP12.85□□□□□ -0.35
CAPRIN1-202ENST00000389645 DYNLT1P63172 113 aa12.85□□□□□ -0.35
CAPRIN1-202ENST00000389645 HSDL1Q3SXM5 330 aa12.85□□□□□ -0.35
CAPRIN1-202ENST00000389645 SLC7A3Q8WY07 619 aa12.85□□□□□ -0.35
CAPRIN1-202ENST00000389645 BRI3BPQ8WY22 251 aa12.85□□□□□ -0.35
CAPRIN1-202ENST00000389645 PCYT2Q99447 389 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms