RNA–Protein interactions for RNA: ENST00000389629.8

RTF1-201, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RTF1, Length 5,021 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-201ENST00000389629 SLC25A41Q8N5S1 370 aa15.03■□□□□ -0
RTF1-201ENST00000389629 TDRD3Q9H7E2 651 aaKnown RBP15.03■□□□□ -0
RTF1-201ENST00000389629 TAS2R14Q9NYV8 317 aa15.03■□□□□ -0
RTF1-201ENST00000389629 UBR1Q8IWV7 1749 aa15.03■□□□□ -0
RTF1-201ENST00000389629 LTN1O94822 1766 aa15.03■□□□□ -0
RTF1-201ENST00000389629 RGPD1P0DJD0 1748 aa15.03■□□□□ -0
RTF1-201ENST00000389629 NOL4O94818 638 aa15.03■□□□□ -0
RTF1-201ENST00000389629 HSPA4LO95757 839 aa15.03■□□□□ -0
RTF1-201ENST00000389629 HMGB2P26583 209 aaKnown RBP15.03■□□□□ -0
RTF1-201ENST00000389629 RPS6KA2Q15349 733 aa15.03■□□□□ -0
RTF1-201ENST00000389629 CC2D2BQ6DHV5 1058 aa15.03■□□□□ -0
RTF1-201ENST00000389629 GRAMD4Q6IC98 578 aa15.03■□□□□ -0
RTF1-201ENST00000389629 ISLR2Q6UXK2 745 aa15.03■□□□□ -0
RTF1-201ENST00000389629 PRPF39Q86UA1 669 aaKnown RBP15.03■□□□□ -0
RTF1-201ENST00000389629 RGPD8O14715 1765 aaPredicted RBP15.03■□□□□ -0
RTF1-201ENST00000389629 PTDSS1P48651 473 aaKnown RBP15.03■□□□□ -0
RTF1-201ENST00000389629 YWHAEP62258 255 aaKnown RBP15.03■□□□□ -0
RTF1-201ENST00000389629 MTMR1Q13613 665 aa15.03■□□□□ -0
RTF1-201ENST00000389629 AFAP1L2Q8N4X5 818 aa15.03■□□□□ -0
RTF1-201ENST00000389629 PI4K2AQ9BTU6 479 aa15.03■□□□□ -0
RTF1-201ENST00000389629 GTF3C4Q9UKN8 822 aa15.03■□□□□ -0
RTF1-201ENST00000389629 HEY1Q9Y5J3 304 aa15.03■□□□□ -0
RTF1-201ENST00000389629 LMTK3Q96Q04 1460 aa15.03■□□□□ -0
RTF1-201ENST00000389629 SLC12A2P55011 1212 aa15.03■□□□□ -0
RTF1-201ENST00000389629 ECM1Q16610 540 aa15.03■□□□□ -0
RTF1-201ENST00000389629 POP1Q99575 1024 aaKnown RBP15.03■□□□□ -0
RTF1-201ENST00000389629 MTO1Q9Y2Z2 717 aaKnown RBP15.03■□□□□ -0
RTF1-201ENST00000389629 SYNJ2BP-COX16A0A087WUM0 186 aa15.02■□□□□ -0
RTF1-201ENST00000389629 ZBED1O96006 694 aa15.02■□□□□ -0
RTF1-201ENST00000389629 SLC1A1P43005 524 aa15.02■□□□□ -0
RTF1-201ENST00000389629 SNRNP35Q16560 246 aaKnown RBP15.02■□□□□ -0
RTF1-201ENST00000389629 ZBTB33Q86T24 672 aa15.02■□□□□ -0
RTF1-201ENST00000389629 CDAN1Q8IWY9 1227 aa15.02■□□□□ -0
RTF1-201ENST00000389629 GALNT4Q8N4A0 578 aa15.02■□□□□ -0
RTF1-201ENST00000389629 HAS1Q92839 578 aa15.02■□□□□ -0
RTF1-201ENST00000389629 PPP1R36Q96LQ0 422 aa15.02■□□□□ -0
RTF1-201ENST00000389629 FAM111AQ96PZ2 611 aa15.02■□□□□ -0
RTF1-201ENST00000389629 COX16Q9P0S2 106 aa15.02■□□□□ -0
RTF1-201ENST00000389629 GINS2Q9Y248 185 aa15.02■□□□□ -0
RTF1-201ENST00000389629 UBAP1LF5GYI3 381 aa15.02■□□□□ -0
RTF1-201ENST00000389629 H0YIN7 160 aa15.02■□□□□ -0
RTF1-201ENST00000389629 RBAK-RBAKDNI3L0D1 243 aa15.02■□□□□ -0
RTF1-201ENST00000389629 SLC26A4O43511 780 aa15.02■□□□□ -0
RTF1-201ENST00000389629 TNNC2P02585 160 aa15.02■□□□□ -0
RTF1-201ENST00000389629 PECAM1P16284 738 aaPredicted RBP15.02■□□□□ -0
RTF1-201ENST00000389629 C16orf87Q6PH81 154 aa15.02■□□□□ -0
RTF1-201ENST00000389629 DDX50Q9BQ39 737 aaKnown RBP15.02■□□□□ -0
RTF1-201ENST00000389629 CHCHD3Q9NX63 227 aaKnown RBP15.02■□□□□ -0
RTF1-201ENST00000389629 CYP39A1Q9NYL5 469 aa15.02■□□□□ -0
RTF1-201ENST00000389629 UNC5CO95185 931 aa15.02□□□□□ -0.01
RTF1-201ENST00000389629 APOEP02649 317 aa15.02□□□□□ -0.01
RTF1-201ENST00000389629 RARAP10276 462 aa15.02□□□□□ -0.01
RTF1-201ENST00000389629 TAL1P17542 331 aaPredicted RBP15.02□□□□□ -0.01
RTF1-201ENST00000389629 ECE1P42892 770 aa15.02□□□□□ -0.01
RTF1-201ENST00000389629 TBC1D16Q8TBP0 767 aa15.02□□□□□ -0.01
RTF1-201ENST00000389629 RNF217Q8TC41 542 aa15.02□□□□□ -0.01
RTF1-201ENST00000389629 KIAA1683Q9H0B3 1180 aa15.02□□□□□ -0.01
RTF1-201ENST00000389629 LZTS1Q9Y250 596 aa15.02□□□□□ -0.01
RTF1-201ENST00000389629 ADCY3O60266 1144 aa15.02□□□□□ -0.01
RTF1-201ENST00000389629 PRKCIP41743 596 aa15.02□□□□□ -0.01
RTF1-201ENST00000389629 PEX5P50542 639 aa15.02□□□□□ -0.01
RTF1-201ENST00000389629 TMEM259Q4ZIN3 620 aa15.02□□□□□ -0.01
RTF1-201ENST00000389629 POLR3CQ9BUI4 534 aaPredicted RBP15.02□□□□□ -0.01
RTF1-201ENST00000389629 TBC1D10AQ9BXI6 508 aa15.02□□□□□ -0.01
RTF1-201ENST00000389629 VPS11Q9H270 941 aa15.02□□□□□ -0.01
RTF1-201ENST00000389629 KIAA0391O15091 583 aaKnown RBP15.01□□□□□ -0.01
RTF1-201ENST00000389629 FGRP09769 529 aa15.01□□□□□ -0.01
RTF1-201ENST00000389629 GARSP41250 739 aaKnown RBP15.01□□□□□ -0.01
RTF1-201ENST00000389629 LNX1Q8TBB1 728 aaPredicted RBP15.01□□□□□ -0.01
RTF1-201ENST00000389629 ACSF2Q96CM8 615 aaPredicted RBP15.01□□□□□ -0.01
RTF1-201ENST00000389629 GTPBP10A4D1E9 387 aaKnown RBP15.01□□□□□ -0.01
RTF1-201ENST00000389629 MGRN1O60291 552 aa15.01□□□□□ -0.01
RTF1-201ENST00000389629 OSTNP61366 133 aa15.01□□□□□ -0.01
RTF1-201ENST00000389629 DNAL1Q4LDG9 190 aa15.01□□□□□ -0.01
RTF1-201ENST00000389629 LARGE2Q8N3Y3 721 aa15.01□□□□□ -0.01
RTF1-201ENST00000389629 CYP2W1Q8TAV3 490 aa15.01□□□□□ -0.01
RTF1-201ENST00000389629 MSTO1Q9BUK6 570 aa15.01□□□□□ -0.01
RTF1-201ENST00000389629 TRPV6Q9H1D0 765 aa15.01□□□□□ -0.01
RTF1-201ENST00000389629 LACTB2Q53H82 288 aaPredicted RBP15.01□□□□□ -0.01
RTF1-201ENST00000389629 EXOC3L1Q86VI1 746 aa15.01□□□□□ -0.01
RTF1-201ENST00000389629 TTC8Q8TAM2 541 aa15.01□□□□□ -0.01
RTF1-201ENST00000389629 SLC5A5Q92911 643 aa15.01□□□□□ -0.01
RTF1-201ENST00000389629 CBWD1Q9BRT8 395 aa15.01□□□□□ -0.01
RTF1-201ENST00000389629 WHRNQ9P202 907 aa15.01□□□□□ -0.01
RTF1-201ENST00000389629 IP6K2Q9UHH9 426 aa15.01□□□□□ -0.01
RTF1-201ENST00000389629 PAIP2BQ9ULR5 123 aaKnown RBP15.01□□□□□ -0.01
RTF1-201ENST00000389629 AHCYL1O43865 530 aa15.01□□□□□ -0.01
RTF1-201ENST00000389629 MYL2P10916 166 aa15.01□□□□□ -0.01
RTF1-201ENST00000389629 COBLL1Q53SF7 1204 aa15.01□□□□□ -0.01
RTF1-201ENST00000389629 K7ERI5 159 aa15□□□□□ -0.01
RTF1-201ENST00000389629 MARCKSL1P49006 195 aa15□□□□□ -0.01
RTF1-201ENST00000389629 GRIK5Q16478 980 aa15□□□□□ -0.01
RTF1-201ENST00000389629 CBWD6Q4V339 395 aa15□□□□□ -0.01
RTF1-201ENST00000389629 CBWD3Q5JTY5 395 aa15□□□□□ -0.01
RTF1-201ENST00000389629 CBWD5Q5RIA9 395 aa15□□□□□ -0.01
RTF1-201ENST00000389629 CDC42EP5Q6NZY7 148 aa15□□□□□ -0.01
RTF1-201ENST00000389629 SLC47A2Q86VL8 602 aa15□□□□□ -0.01
RTF1-201ENST00000389629 APLFQ8IW19 511 aaPredicted RBP15□□□□□ -0.01
RTF1-201ENST00000389629 TMEM35BQ8NCS4 154 aa15□□□□□ -0.01
RTF1-201ENST00000389629 SLC7A3Q8WY07 619 aa15□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms