RNA–Protein interactions for RNA: ENST00000383738.6

CSPG5-202, Transcript of chondroitin sulfate proteoglycan 5, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CSPG5, Length 4,161 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG5-202ENST00000383738 SGK1O00141 431 aa19.95■□□□□ 0.78
CSPG5-202ENST00000383738 CTCFP49711 727 aaPredicted RBP19.95■□□□□ 0.78
CSPG5-202ENST00000383738 CCDC60Q8IWA6 550 aaPredicted RBP19.95■□□□□ 0.78
CSPG5-202ENST00000383738 C4orf33Q8N1A6 199 aa19.95■□□□□ 0.78
CSPG5-202ENST00000383738 USP15Q9Y4E8 981 aaPredicted RBP19.95■□□□□ 0.78
CSPG5-202ENST00000383738 ATRNO75882 1429 aa19.95■□□□□ 0.78
CSPG5-202ENST00000383738 PI4K2BG5E9Z4 385 aa19.95■□□□□ 0.78
CSPG5-202ENST00000383738 SUPT20HL2P0C7V6 817 aa19.95■□□□□ 0.78
CSPG5-202ENST00000383738 TARSP26639 723 aaKnown RBP19.95■□□□□ 0.78
CSPG5-202ENST00000383738 CACNB2Q08289 660 aaPredicted RBP19.95■□□□□ 0.78
CSPG5-202ENST00000383738 KCNV1Q6PIU1 500 aa19.95■□□□□ 0.78
CSPG5-202ENST00000383738 CCDC110Q8TBZ0 833 aa19.95■□□□□ 0.78
CSPG5-202ENST00000383738 CCHCR1Q8TD31 782 aa19.95■□□□□ 0.78
CSPG5-202ENST00000383738 MAML1Q92585 1016 aa19.95■□□□□ 0.78
CSPG5-202ENST00000383738 FAM208AQ9UK61 1670 aaKnown RBP19.95■□□□□ 0.78
CSPG5-202ENST00000383738 PPP1R12AO14974 1030 aaPredicted RBP19.95■□□□□ 0.78
CSPG5-202ENST00000383738 ATN1P54259 1190 aaPredicted RBP19.95■□□□□ 0.78
CSPG5-202ENST00000383738 SYCP2LQ5T4T6 812 aa19.95■□□□□ 0.78
CSPG5-202ENST00000383738 ZNF720Q7Z2F6 126 aa19.95■□□□□ 0.78
CSPG5-202ENST00000383738 CPB2Q96IY4 423 aa19.95■□□□□ 0.78
CSPG5-202ENST00000383738 PRDM5Q9NQX1 630 aaPredicted RBP19.95■□□□□ 0.78
CSPG5-202ENST00000383738 METTL5Q9NRN9 209 aaKnown RBP19.95■□□□□ 0.78
CSPG5-202ENST00000383738 SPDYE16A6NNV3 312 aaPredicted RBP19.94■□□□□ 0.78
CSPG5-202ENST00000383738 A8MXQ7 604 aa19.94■□□□□ 0.78
CSPG5-202ENST00000383738 SOX5P35711 763 aa19.94■□□□□ 0.78
CSPG5-202ENST00000383738 IRX1P78414 480 aaPredicted RBP19.94■□□□□ 0.78
CSPG5-202ENST00000383738 BEX3Q00994 111 aa19.94■□□□□ 0.78
CSPG5-202ENST00000383738 ITKQ08881 620 aa19.94■□□□□ 0.78
CSPG5-202ENST00000383738 NT5DC1Q5TFE4 455 aa19.94■□□□□ 0.78
CSPG5-202ENST00000383738 PLEKHH3Q7Z736 793 aa19.94■□□□□ 0.78
CSPG5-202ENST00000383738 DHX38Q92620 1227 aaKnown RBP19.94■□□□□ 0.78
CSPG5-202ENST00000383738 MMTAG2Q9BU76 263 aaKnown RBP19.94■□□□□ 0.78
CSPG5-202ENST00000383738 M0QYV0 167 aa19.94■□□□□ 0.78
CSPG5-202ENST00000383738 GYG2O15488 501 aa19.94■□□□□ 0.78
CSPG5-202ENST00000383738 MAFGO15525 162 aa19.94■□□□□ 0.78
CSPG5-202ENST00000383738 HLA-DRAP01903 254 aa19.94■□□□□ 0.78
CSPG5-202ENST00000383738 ZNF844Q08AG5 666 aa19.94■□□□□ 0.78
CSPG5-202ENST00000383738 TMED1Q13445 227 aa19.94■□□□□ 0.78
CSPG5-202ENST00000383738 LARP7Q4G0J3 582 aaKnown RBP eCLIP19.94■□□□□ 0.78
CSPG5-202ENST00000383738 SWT1Q5T5J6 900 aaKnown RBP19.94■□□□□ 0.78
CSPG5-202ENST00000383738 THEMIS2Q5TEJ8 643 aa19.94■□□□□ 0.78
CSPG5-202ENST00000383738 RANBP17Q9H2T7 1088 aaKnown RBP19.94■□□□□ 0.78
CSPG5-202ENST00000383738 BCAS3Q9H6U6 928 aa19.94■□□□□ 0.78
CSPG5-202ENST00000383738 OSGEPQ9NPF4 335 aa19.94■□□□□ 0.78
CSPG5-202ENST00000383738 APEX2Q9UBZ4 518 aa19.94■□□□□ 0.78
CSPG5-202ENST00000383738 A0A087WZ62 844 aa19.94■□□□□ 0.78
CSPG5-202ENST00000383738 FOXN3O00409 490 aaPredicted RBP19.94■□□□□ 0.78
CSPG5-202ENST00000383738 FSBPO95073 299 aa19.94■□□□□ 0.78
CSPG5-202ENST00000383738 ESRRAP11474 423 aaPredicted RBP19.94■□□□□ 0.78
CSPG5-202ENST00000383738 BRD2P25440 801 aaKnown RBP19.94■□□□□ 0.78
CSPG5-202ENST00000383738 DNAJC3Q13217 504 aa19.94■□□□□ 0.78
CSPG5-202ENST00000383738 DRP2Q13474 957 aa19.94■□□□□ 0.78
CSPG5-202ENST00000383738 PPP2R5EQ16537 467 aa19.94■□□□□ 0.78
CSPG5-202ENST00000383738 CENPPQ6IPU0 288 aa19.94■□□□□ 0.78
CSPG5-202ENST00000383738 CATSPERGQ6ZRH7 1159 aa19.94■□□□□ 0.78
CSPG5-202ENST00000383738 ACAP3Q96P50 834 aa19.94■□□□□ 0.78
CSPG5-202ENST00000383738 FDXACB1Q9BRP7 624 aaPredicted RBP19.94■□□□□ 0.78
CSPG5-202ENST00000383738 NUP85Q9BW27 656 aa19.94■□□□□ 0.78
CSPG5-202ENST00000383738 CYP39A1Q9NYL5 469 aa19.94■□□□□ 0.78
CSPG5-202ENST00000383738 H3BRB1 525 aa19.93■□□□□ 0.78
CSPG5-202ENST00000383738 INSRRP14616 1297 aa19.93■□□□□ 0.78
CSPG5-202ENST00000383738 YY1P25490 414 aa19.93■□□□□ 0.78
CSPG5-202ENST00000383738 SNX16P57768 344 aa19.93■□□□□ 0.78
CSPG5-202ENST00000383738 SLMAPQ14BN4 828 aa19.93■□□□□ 0.78
CSPG5-202ENST00000383738 NAB2Q15742 525 aa19.93■□□□□ 0.78
CSPG5-202ENST00000383738 CLUL1Q15846 466 aa19.93■□□□□ 0.78
CSPG5-202ENST00000383738 Q4G0T1 1027 aa19.93■□□□□ 0.78
CSPG5-202ENST00000383738 ATF7IP2Q5U623 682 aa19.93■□□□□ 0.78
CSPG5-202ENST00000383738 PIP4K2CQ8TBX8 421 aa19.93■□□□□ 0.78
CSPG5-202ENST00000383738 KLF6Q99612 283 aaPredicted RBP19.93■□□□□ 0.78
CSPG5-202ENST00000383738 DUSP9Q99956 384 aaKnown RBP19.93■□□□□ 0.78
CSPG5-202ENST00000383738 TUT1Q9H6E5 874 aaKnown RBP19.93■□□□□ 0.78
CSPG5-202ENST00000383738 ABCF3Q9NUQ8 709 aa19.93■□□□□ 0.78
CSPG5-202ENST00000383738 CALCAP01258 141 aa19.93■□□□□ 0.78
CSPG5-202ENST00000383738 KITP10721 976 aa19.93■□□□□ 0.78
CSPG5-202ENST00000383738 EPM2AIP1Q7L775 607 aaPredicted RBP19.93■□□□□ 0.78
CSPG5-202ENST00000383738 OSMRQ99650 979 aa19.93■□□□□ 0.78
CSPG5-202ENST00000383738 MAD1L1Q9Y6D9 718 aa19.93■□□□□ 0.78
CSPG5-202ENST00000383738 UBTFL6P0CB48 400 aaPredicted RBP19.93■□□□□ 0.78
CSPG5-202ENST00000383738 SAT1P21673 171 aa19.93■□□□□ 0.78
CSPG5-202ENST00000383738 PSMA2P25787 234 aa19.93■□□□□ 0.78
CSPG5-202ENST00000383738 ALDH5A1P51649 535 aaPredicted RBP19.93■□□□□ 0.78
CSPG5-202ENST00000383738 SLC35G2Q8TBE7 412 aa19.93■□□□□ 0.78
CSPG5-202ENST00000383738 UPF1Q92900 1129 aaKnown RBP eCLIP19.93■□□□□ 0.78
CSPG5-202ENST00000383738 TTC17Q96AE7 1141 aa19.93■□□□□ 0.78
CSPG5-202ENST00000383738 FGFBP2Q9BYJ0 223 aa19.93■□□□□ 0.78
CSPG5-202ENST00000383738 SEMA4AQ9H3S1 761 aa19.93■□□□□ 0.78
CSPG5-202ENST00000383738 NMRK2Q9NPI5 230 aa19.93■□□□□ 0.78
CSPG5-202ENST00000383738 KIAA0100Q14667 2235 aaKnown RBP19.93■□□□□ 0.78
CSPG5-202ENST00000383738 DCDC2CA8MYV0 355 aa19.92■□□□□ 0.78
CSPG5-202ENST00000383738 MAPK13O15264 365 aa19.92■□□□□ 0.78
CSPG5-202ENST00000383738 KCNJ2P63252 427 aa19.92■□□□□ 0.78
CSPG5-202ENST00000383738 EDRF1Q3B7T1 1238 aa19.92■□□□□ 0.78
CSPG5-202ENST00000383738 ARMCX2Q7L311 632 aa19.92■□□□□ 0.78
CSPG5-202ENST00000383738 ZCWPW1Q9H0M4 648 aa19.92■□□□□ 0.78
CSPG5-202ENST00000383738 C2orf40Q9H1Z8 148 aa19.92■□□□□ 0.78
CSPG5-202ENST00000383738 SMYD3Q9H7B4 428 aa19.92■□□□□ 0.78
CSPG5-202ENST00000383738 ACP6Q9NPH0 428 aa19.92■□□□□ 0.78
CSPG5-202ENST00000383738 PDGFCQ9NRA1 345 aa19.92■□□□□ 0.78
CSPG5-202ENST00000383738 GRID2IPA4D2P6 1211 aa19.92■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms