RNA–Protein interactions for RNA: ENST00000381037.4

CDPF1-202, Transcript of cysteine rich DPF motif domain containing 1, humanhuman

TSL 1 (best)

Gene CDPF1, Length 1,600 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDPF1-202ENST00000381037 ANP32EQ9BTT0 268 aa21.59■■□□□ 1.05
CDPF1-202ENST00000381037 MKNK1Q9BUB5 465 aa21.59■■□□□ 1.05
CDPF1-202ENST00000381037 MTMR12Q9C0I1 747 aa21.59■■□□□ 1.05
CDPF1-202ENST00000381037 ENTPD7Q9NQZ7 604 aa21.59■■□□□ 1.05
CDPF1-202ENST00000381037 FRMD4BQ9Y2L6 1034 aa21.59■■□□□ 1.05
CDPF1-202ENST00000381037 SPTLC1O15269 473 aa21.58■■□□□ 1.05
CDPF1-202ENST00000381037 CXCL14O95715 111 aa21.58■■□□□ 1.05
CDPF1-202ENST00000381037 DLATP10515 647 aaKnown RBP21.58■■□□□ 1.05
CDPF1-202ENST00000381037 FGFR3P22607 806 aa21.58■■□□□ 1.05
CDPF1-202ENST00000381037 PSMC2P35998 433 aaKnown RBP21.58■■□□□ 1.05
CDPF1-202ENST00000381037 ELAVL2Q12926 359 aaKnown RBP21.58■■□□□ 1.05
CDPF1-202ENST00000381037 SMC1AQ14683 1233 aaKnown RBP21.58■■□□□ 1.05
CDPF1-202ENST00000381037 DUOXA2Q1HG44 320 aa21.58■■□□□ 1.05
CDPF1-202ENST00000381037 USP41Q3LFD5 358 aa21.58■■□□□ 1.05
CDPF1-202ENST00000381037 DPCR1Q3MIW9 517 aa21.58■■□□□ 1.05
CDPF1-202ENST00000381037 TCEAL5Q5H9L2 206 aa21.58■■□□□ 1.05
CDPF1-202ENST00000381037 CCDC183Q5T5S1 534 aa21.58■■□□□ 1.05
CDPF1-202ENST00000381037 FAM171A1Q5VUB5 890 aa21.58■■□□□ 1.05
CDPF1-202ENST00000381037 PLPP4Q5VZY2 271 aa21.58■■□□□ 1.05
CDPF1-202ENST00000381037 TMC2Q8TDI7 906 aa21.58■■□□□ 1.05
CDPF1-202ENST00000381037 SIX4Q9UIU6 781 aa21.58■■□□□ 1.05
CDPF1-202ENST00000381037 LRRIQ3A6PVS8 624 aaPredicted RBP21.58■■□□□ 1.04
CDPF1-202ENST00000381037 I3L4J1 428 aa21.58■■□□□ 1.04
CDPF1-202ENST00000381037 CETN3O15182 167 aa21.58■■□□□ 1.04
CDPF1-202ENST00000381037 NLRP12P59046 1061 aa21.58■■□□□ 1.04
CDPF1-202ENST00000381037 LILRA4P59901 499 aa21.58■■□□□ 1.04
CDPF1-202ENST00000381037 DLG4P78352 724 aa21.58■■□□□ 1.04
CDPF1-202ENST00000381037 ENPEPQ07075 957 aa21.58■■□□□ 1.04
CDPF1-202ENST00000381037 PAK1Q13153 545 aa21.58■■□□□ 1.04
CDPF1-202ENST00000381037 COL19A1Q14993 1142 aa21.58■■□□□ 1.04
CDPF1-202ENST00000381037 RTP2Q5QGT7 225 aa21.58■■□□□ 1.04
CDPF1-202ENST00000381037 SUSD3Q96L08 255 aa21.58■■□□□ 1.04
CDPF1-202ENST00000381037 FNBP1Q96RU3 617 aa21.58■■□□□ 1.04
CDPF1-202ENST00000381037 CTNND2Q9UQB3 1225 aa21.58■■□□□ 1.04
CDPF1-202ENST00000381037 TRAPPC3O43617 180 aa21.57■■□□□ 1.04
CDPF1-202ENST00000381037 TNNI1P19237 187 aa21.57■■□□□ 1.04
CDPF1-202ENST00000381037 HYAL1Q12794 435 aa21.57■■□□□ 1.04
CDPF1-202ENST00000381037 KLHL40Q2TBA0 621 aa21.57■■□□□ 1.04
CDPF1-202ENST00000381037 INTS8Q75QN2 995 aaKnown RBP21.57■■□□□ 1.04
CDPF1-202ENST00000381037 TRAPPC11Q7Z392 1133 aa21.57■■□□□ 1.04
CDPF1-202ENST00000381037 FAM186BQ8IYM0 893 aa21.57■■□□□ 1.04
CDPF1-202ENST00000381037 MAFAQ8NHW3 353 aaPredicted RBP21.57■■□□□ 1.04
CDPF1-202ENST00000381037 RWDD2AQ9UIY3 292 aa21.57■■□□□ 1.04
CDPF1-202ENST00000381037 ITGA11Q9UKX5 1188 aa21.57■■□□□ 1.04
CDPF1-202ENST00000381037 NUB1Q9Y5A7 615 aa21.57■■□□□ 1.04
CDPF1-202ENST00000381037 BICDL2A1A5D9 508 aa21.56■■□□□ 1.04
CDPF1-202ENST00000381037 M0QZQ0 153 aa21.56■■□□□ 1.04
CDPF1-202ENST00000381037 ITGB3P05106 788 aa21.56■■□□□ 1.04
CDPF1-202ENST00000381037 TMEM191BP0C7N4 346 aa21.56■■□□□ 1.04
CDPF1-202ENST00000381037 GLUD2P49448 558 aa21.56■■□□□ 1.04
CDPF1-202ENST00000381037 CCDC85BQ15834 202 aaPredicted RBP21.56■■□□□ 1.04
CDPF1-202ENST00000381037 PDZRN4Q6ZMN7 1036 aaPredicted RBP21.56■■□□□ 1.04
CDPF1-202ENST00000381037 MICALL1Q8N3F8 863 aa21.56■■□□□ 1.04
CDPF1-202ENST00000381037 PIK3R5Q8WYR1 880 aa21.56■■□□□ 1.04
CDPF1-202ENST00000381037 ANKRD36BP1Q96IX9 119 aa21.56■■□□□ 1.04
CDPF1-202ENST00000381037 TTPALQ9BTX7 342 aa21.56■■□□□ 1.04
CDPF1-202ENST00000381037 RXFP1Q9HBX9 757 aa21.56■■□□□ 1.04
CDPF1-202ENST00000381037 MRPL17Q9NRX2 175 aaKnown RBP21.56■■□□□ 1.04
CDPF1-202ENST00000381037 IKBKBO14920 756 aa21.55■■□□□ 1.04
CDPF1-202ENST00000381037 SLC16A3O15427 465 aaKnown RBP21.55■■□□□ 1.04
CDPF1-202ENST00000381037 URODP06132 367 aa21.55■■□□□ 1.04
CDPF1-202ENST00000381037 PAX3P23760 479 aa21.55■■□□□ 1.04
CDPF1-202ENST00000381037 POLR2BP30876 1174 aaKnown RBP21.55■■□□□ 1.04
CDPF1-202ENST00000381037 STX17P56962 302 aa21.55■■□□□ 1.04
CDPF1-202ENST00000381037 KCNC3Q14003 757 aa21.55■■□□□ 1.04
CDPF1-202ENST00000381037 CSGALNACT2Q8N6G5 542 aa21.55■■□□□ 1.04
CDPF1-202ENST00000381037 LNX1Q8TBB1 728 aaPredicted RBP21.55■■□□□ 1.04
CDPF1-202ENST00000381037 CEP63Q96MT8 703 aa21.55■■□□□ 1.04
CDPF1-202ENST00000381037 AGAP1Q9UPQ3 857 aa21.55■■□□□ 1.04
CDPF1-202ENST00000381037 SCN1AP35498 2009 aa21.55■■□□□ 1.04
CDPF1-202ENST00000381037 VWA8A3KMH1 1905 aa21.55■■□□□ 1.04
CDPF1-202ENST00000381037 SYN3O14994 580 aa21.55■■□□□ 1.04
CDPF1-202ENST00000381037 CST3P01034 146 aaPredicted RBP21.55■■□□□ 1.04
CDPF1-202ENST00000381037 C4BPAP04003 597 aaKnown RBP21.55■■□□□ 1.04
CDPF1-202ENST00000381037 PTMSP20962 102 aa21.55■■□□□ 1.04
CDPF1-202ENST00000381037 TKTP29401 623 aaKnown RBP21.55■■□□□ 1.04
CDPF1-202ENST00000381037 GTF2F1P35269 517 aaKnown RBP eCLIP21.55■■□□□ 1.04
CDPF1-202ENST00000381037 VAMP7P51809 220 aa21.55■■□□□ 1.04
CDPF1-202ENST00000381037 BFSP1Q12934 665 aa21.55■■□□□ 1.04
CDPF1-202ENST00000381037 BMS1Q14692 1282 aaKnown RBP21.55■■□□□ 1.04
CDPF1-202ENST00000381037 DUSP6Q16828 381 aa21.55■■□□□ 1.04
CDPF1-202ENST00000381037 C15orf39Q6ZRI6 1047 aa21.55■■□□□ 1.04
CDPF1-202ENST00000381037 FILIP1Q7Z7B0 1213 aa21.55■■□□□ 1.04
CDPF1-202ENST00000381037 LRRC52Q8N7C0 313 aa21.55■■□□□ 1.04
CDPF1-202ENST00000381037 TLE6Q9H808 572 aa21.55■■□□□ 1.04
CDPF1-202ENST00000381037 SSX2IPQ9Y2D8 614 aa21.55■■□□□ 1.04
CDPF1-202ENST00000381037 BRWD1Q9NSI6 2320 aa21.54■■□□□ 1.04
CDPF1-202ENST00000381037 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP21.54■■□□□ 1.04
CDPF1-202ENST00000381037 TULP1O00294 542 aaPredicted RBP21.54■■□□□ 1.04
CDPF1-202ENST00000381037 C2CD2LO14523 706 aa21.54■■□□□ 1.04
CDPF1-202ENST00000381037 PER2O15055 1255 aa21.54■■□□□ 1.04
CDPF1-202ENST00000381037 TNNC2P02585 160 aa21.54■■□□□ 1.04
CDPF1-202ENST00000381037 CNPP09543 421 aaKnown RBP21.54■■□□□ 1.04
CDPF1-202ENST00000381037 NRIP1P48552 1158 aa21.54■■□□□ 1.04
CDPF1-202ENST00000381037 AP3M2P53677 418 aa21.54■■□□□ 1.04
CDPF1-202ENST00000381037 RBP5P82980 135 aa21.54■■□□□ 1.04
CDPF1-202ENST00000381037 MRPL58Q14197 206 aaKnown RBP21.54■■□□□ 1.04
CDPF1-202ENST00000381037 CTC1Q2NKJ3 1217 aa21.54■■□□□ 1.04
CDPF1-202ENST00000381037 KIAA1841Q6NSI8 718 aa21.54■■□□□ 1.04
CDPF1-202ENST00000381037 CAVIN1Q6NZI2 390 aaKnown RBP21.54■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms