RNA–Protein interactions for RNA: ENST00000380829.5

CLCN4-201, Transcript of chloride voltage-gated channel 4, humanhuman

TSL 5 BASIC

Gene CLCN4, Length 2,418 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN4-201ENST00000380829 ZNF286BP0CG31 522 aa15.24■□□□□ 0.03
CLCN4-201ENST00000380829 SLC26A2P50443 739 aa15.24■□□□□ 0.03
CLCN4-201ENST00000380829 NNTQ13423 1086 aa15.24■□□□□ 0.03
CLCN4-201ENST00000380829 KCTD19Q17RG1 926 aaPredicted RBP15.24■□□□□ 0.03
CLCN4-201ENST00000380829 MAMDC4Q6UXC1 1216 aa15.24■□□□□ 0.03
CLCN4-201ENST00000380829 AFG1LQ8WV93 481 aa15.24■□□□□ 0.03
CLCN4-201ENST00000380829 INO80BQ9C086 356 aaPredicted RBP15.24■□□□□ 0.03
CLCN4-201ENST00000380829 TMEM59LQ9UK28 342 aa15.24■□□□□ 0.03
CLCN4-201ENST00000380829 PLXNB2O15031 1838 aa15.24■□□□□ 0.03
CLCN4-201ENST00000380829 DDX3YO15523 660 aaKnown RBP15.23■□□□□ 0.03
CLCN4-201ENST00000380829 GRIN3BO60391 1043 aa15.23■□□□□ 0.03
CLCN4-201ENST00000380829 CELF2O95319 508 aaKnown RBP15.23■□□□□ 0.03
CLCN4-201ENST00000380829 DCAF12L1Q5VU92 463 aa15.23■□□□□ 0.03
CLCN4-201ENST00000380829 BRSK2Q8IWQ3 736 aa15.23■□□□□ 0.03
CLCN4-201ENST00000380829 ZNF653Q96CK0 615 aa15.23■□□□□ 0.03
CLCN4-201ENST00000380829 BTBD6Q96KE9 485 aa15.23■□□□□ 0.03
CLCN4-201ENST00000380829 BUD13Q9BRD0 619 aaKnown RBP eCLIP15.23■□□□□ 0.03
CLCN4-201ENST00000380829 TRIM6Q9C030 488 aaPredicted RBP15.23■□□□□ 0.03
CLCN4-201ENST00000380829 MINDY3Q9H8M7 445 aa15.23■□□□□ 0.03
CLCN4-201ENST00000380829 CDKN2AIPQ9NXV6 580 aaPredicted RBP15.23■□□□□ 0.03
CLCN4-201ENST00000380829 ALG6Q9Y672 507 aa15.23■□□□□ 0.03
CLCN4-201ENST00000380829 PLXNA1Q9UIW2 1896 aa15.23■□□□□ 0.03
CLCN4-201ENST00000380829 ABLIM1O14639 778 aa15.23■□□□□ 0.03
CLCN4-201ENST00000380829 CSDE1O75534 798 aaKnown RBP15.23■□□□□ 0.03
CLCN4-201ENST00000380829 HEXIM1O94992 359 aaKnown RBP15.23■□□□□ 0.03
CLCN4-201ENST00000380829 RPSAP08865 295 aaKnown RBP15.23■□□□□ 0.03
CLCN4-201ENST00000380829 INSRRP14616 1297 aa15.23■□□□□ 0.03
CLCN4-201ENST00000380829 CDR1P51861 262 aa15.23■□□□□ 0.03
CLCN4-201ENST00000380829 CCNHP51946 323 aaPredicted RBP15.23■□□□□ 0.03
CLCN4-201ENST00000380829 OSTNP61366 133 aa15.23■□□□□ 0.03
CLCN4-201ENST00000380829 NOP14P78316 857 aaKnown RBP15.23■□□□□ 0.03
CLCN4-201ENST00000380829 LAMC2Q13753 1193 aa15.23■□□□□ 0.03
CLCN4-201ENST00000380829 SNCBQ16143 134 aa15.23■□□□□ 0.03
CLCN4-201ENST00000380829 TMEM132AQ24JP5 1023 aa15.23■□□□□ 0.03
CLCN4-201ENST00000380829 DPP9Q86TI2 863 aa15.23■□□□□ 0.03
CLCN4-201ENST00000380829 EXOC8Q8IYI6 725 aa15.23■□□□□ 0.03
CLCN4-201ENST00000380829 PTPN18Q99952 460 aa15.23■□□□□ 0.03
CLCN4-201ENST00000380829 EPN3Q9H201 632 aa15.23■□□□□ 0.03
CLCN4-201ENST00000380829 SLC45A1Q9Y2W3 748 aa15.23■□□□□ 0.03
CLCN4-201ENST00000380829 NUB1Q9Y5A7 615 aa15.23■□□□□ 0.03
CLCN4-201ENST00000380829 RAD51CO43502 376 aa15.22■□□□□ 0.03
CLCN4-201ENST00000380829 HSF2BPO75031 334 aa15.22■□□□□ 0.03
CLCN4-201ENST00000380829 C22orf31O95567 290 aa15.22■□□□□ 0.03
CLCN4-201ENST00000380829 GH1P01241 217 aa15.22■□□□□ 0.03
CLCN4-201ENST00000380829 ITGA4P13612 1032 aa15.22■□□□□ 0.03
CLCN4-201ENST00000380829 INHBEP58166 350 aa15.22■□□□□ 0.03
CLCN4-201ENST00000380829 CUL2Q13617 745 aa15.22■□□□□ 0.03
CLCN4-201ENST00000380829 NCOA4Q13772 614 aa15.22■□□□□ 0.03
CLCN4-201ENST00000380829 MESDQ14696 234 aa15.22■□□□□ 0.03
CLCN4-201ENST00000380829 GLE1Q53GS7 698 aaKnown RBP15.22■□□□□ 0.03
CLCN4-201ENST00000380829 MICALCLQ6ZW33 695 aa15.22■□□□□ 0.03
CLCN4-201ENST00000380829 GPR142Q7Z601 462 aa15.22■□□□□ 0.03
CLCN4-201ENST00000380829 ANKRD23Q86SG2 305 aa15.22■□□□□ 0.03
CLCN4-201ENST00000380829 THNSL1Q8IYQ7 743 aa15.22■□□□□ 0.03
CLCN4-201ENST00000380829 NUP85Q9BW27 656 aa15.22■□□□□ 0.03
CLCN4-201ENST00000380829 MTMR12Q9C0I1 747 aa15.22■□□□□ 0.03
CLCN4-201ENST00000380829 C2orf40Q9H1Z8 148 aa15.22■□□□□ 0.03
CLCN4-201ENST00000380829 VTA1Q9NP79 307 aa15.22■□□□□ 0.03
CLCN4-201ENST00000380829 HAUS2Q9NVX0 235 aa15.22■□□□□ 0.03
CLCN4-201ENST00000380829 UNCXA6NJT0 531 aa15.22■□□□□ 0.03
CLCN4-201ENST00000380829 OGTO15294 1046 aa15.22■□□□□ 0.03
CLCN4-201ENST00000380829 SNAI1O95863 264 aaPredicted RBP15.22■□□□□ 0.03
CLCN4-201ENST00000380829 SSTR3P32745 418 aaPredicted RBP15.22■□□□□ 0.03
CLCN4-201ENST00000380829 GCLCP48506 637 aaPredicted RBP15.22■□□□□ 0.03
CLCN4-201ENST00000380829 TNNC1P63316 161 aa15.22■□□□□ 0.03
CLCN4-201ENST00000380829 GUCY2DQ02846 1103 aa15.22■□□□□ 0.03
CLCN4-201ENST00000380829 ZNF211Q13398 564 aaPredicted RBP15.22■□□□□ 0.03
CLCN4-201ENST00000380829 TFDP1Q14186 410 aa15.22■□□□□ 0.03
CLCN4-201ENST00000380829 CYB5D1Q6P9G0 228 aa15.22■□□□□ 0.03
CLCN4-201ENST00000380829 TMEM270Q6UE05 265 aa15.22■□□□□ 0.03
CLCN4-201ENST00000380829 CPNE8Q86YQ8 564 aa15.22■□□□□ 0.03
CLCN4-201ENST00000380829 RASGEF1CQ8N431 466 aa15.22■□□□□ 0.03
CLCN4-201ENST00000380829 CEP120Q8N960 986 aa15.22■□□□□ 0.03
CLCN4-201ENST00000380829 MYCBPAPQ8TBZ2 947 aa15.22■□□□□ 0.03
CLCN4-201ENST00000380829 ALG3Q92685 438 aa15.22■□□□□ 0.03
CLCN4-201ENST00000380829 KATNBL1Q9H079 304 aa15.22■□□□□ 0.03
CLCN4-201ENST00000380829 EPB41L5Q9HCM4 733 aa15.22■□□□□ 0.03
CLCN4-201ENST00000380829 MORF4L1Q9UBU8 362 aa15.22■□□□□ 0.03
CLCN4-201ENST00000380829 EVPLQ92817 2033 aa15.21■□□□□ 0.03
CLCN4-201ENST00000380829 KRIT1O00522 736 aa15.21■□□□□ 0.03
CLCN4-201ENST00000380829 CST3P01034 146 aaPredicted RBP15.21■□□□□ 0.03
CLCN4-201ENST00000380829 FGGP02679 453 aa15.21■□□□□ 0.03
CLCN4-201ENST00000380829 IQCF3P0C7M6 154 aa15.21■□□□□ 0.03
CLCN4-201ENST00000380829 ACO1P21399 889 aaKnown RBP15.21■□□□□ 0.03
CLCN4-201ENST00000380829 HADHBP55084 474 aaKnown RBP15.21■□□□□ 0.03
CLCN4-201ENST00000380829 MCL1Q07820 350 aa15.21■□□□□ 0.03
CLCN4-201ENST00000380829 CRYMQ14894 314 aa15.21■□□□□ 0.03
CLCN4-201ENST00000380829 NAA25Q14CX7 972 aa15.21■□□□□ 0.03
CLCN4-201ENST00000380829 PTGISQ16647 500 aa15.21■□□□□ 0.03
CLCN4-201ENST00000380829 CLEC16AQ2KHT3 1053 aa15.21■□□□□ 0.03
CLCN4-201ENST00000380829 ZNF568Q3ZCX4 644 aa15.21■□□□□ 0.03
CLCN4-201ENST00000380829 ATF7IP2Q5U623 682 aa15.21■□□□□ 0.03
CLCN4-201ENST00000380829 SPRYD7Q5W111 196 aa15.21■□□□□ 0.03
CLCN4-201ENST00000380829 EEF1DP3Q658K8 133 aa15.21■□□□□ 0.03
CLCN4-201ENST00000380829 YTHDF3Q7Z739 585 aaKnown RBP15.21■□□□□ 0.03
CLCN4-201ENST00000380829 NLRP14Q86W24 1093 aa15.21■□□□□ 0.03
CLCN4-201ENST00000380829 SPATS2Q86XZ4 545 aaKnown RBP15.21■□□□□ 0.03
CLCN4-201ENST00000380829 PARP9Q8IXQ6 854 aa15.21■□□□□ 0.03
CLCN4-201ENST00000380829 ZNF564Q8TBZ8 553 aaPredicted RBP15.21■□□□□ 0.03
CLCN4-201ENST00000380829 CPA5Q8WXQ8 436 aa15.21■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms