RNA–Protein interactions for RNA: ENST00000380741.8

SMN2-201, Transcript of survival of motor neuron 2, centromeric, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SMN2, Length 900 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN2-201ENST00000380741 DDX12PQ92771 950 aa18.39■□□□□ 0.53
SMN2-201ENST00000380741 BICD1Q96G01 975 aa18.39■□□□□ 0.53
SMN2-201ENST00000380741 AK8Q96MA6 479 aa18.39■□□□□ 0.53
SMN2-201ENST00000380741 CORO1BQ9BR76 489 aa18.39■□□□□ 0.53
SMN2-201ENST00000380741 REEP2Q9BRK0 252 aa18.39■□□□□ 0.53
SMN2-201ENST00000380741 DDX23Q9BUQ8 820 aaKnown RBP18.39■□□□□ 0.53
SMN2-201ENST00000380741 GDE1Q9NZC3 331 aa18.39■□□□□ 0.53
SMN2-201ENST00000380741 LARSQ9P2J5 1176 aaKnown RBP18.39■□□□□ 0.53
SMN2-201ENST00000380741 INSL5Q9Y5Q6 135 aa18.39■□□□□ 0.53
SMN2-201ENST00000380741 EP300Q09472 2414 aaPredicted RBP18.38■□□□□ 0.53
SMN2-201ENST00000380741 PATJQ8NI35 1801 aa18.38■□□□□ 0.53
SMN2-201ENST00000380741 KANSL1LA0AUZ9 987 aa18.38■□□□□ 0.53
SMN2-201ENST00000380741 H0YCG3 227 aa18.38■□□□□ 0.53
SMN2-201ENST00000380741 ECI2O75521 394 aa18.38■□□□□ 0.53
SMN2-201ENST00000380741 PFKPQ01813 784 aa18.38■□□□□ 0.53
SMN2-201ENST00000380741 PRKCQQ04759 706 aa18.38■□□□□ 0.53
SMN2-201ENST00000380741 SLC44A4Q53GD3 710 aa18.38■□□□□ 0.53
SMN2-201ENST00000380741 PRSS36Q5K4E3 855 aa18.38■□□□□ 0.53
SMN2-201ENST00000380741 TPGS2Q68CL5 300 aa18.38■□□□□ 0.53
SMN2-201ENST00000380741 HAUS6Q7Z4H7 955 aa18.38■□□□□ 0.53
SMN2-201ENST00000380741 C1orf210Q8IVY1 113 aa18.38■□□□□ 0.53
SMN2-201ENST00000380741 ADSSL1Q8N142 457 aa18.38■□□□□ 0.53
SMN2-201ENST00000380741 APPL2Q8NEU8 664 aa18.38■□□□□ 0.53
SMN2-201ENST00000380741 KCNN1Q92952 543 aa18.38■□□□□ 0.53
SMN2-201ENST00000380741 TCEAL4Q96EI5 215 aa18.38■□□□□ 0.53
SMN2-201ENST00000380741 PLA2G2FQ9BZM2 168 aa18.38■□□□□ 0.53
SMN2-201ENST00000380741 PLEKHA5Q9HAU0 1116 aa18.38■□□□□ 0.53
SMN2-201ENST00000380741 ODF2LQ9ULJ1 636 aa18.38■□□□□ 0.53
SMN2-201ENST00000380741 PCDHB8Q9UN66 801 aa18.38■□□□□ 0.53
SMN2-201ENST00000380741 SMC3Q9UQE7 1217 aa18.38■□□□□ 0.53
SMN2-201ENST00000380741 R4GN57 208 aa18.38■□□□□ 0.53
SMN2-201ENST00000380741 TTC26A0AVF1 554 aa18.37■□□□□ 0.53
SMN2-201ENST00000380741 CENPBP07199 599 aaPredicted RBP18.37■□□□□ 0.53
SMN2-201ENST00000380741 CLTAP09496 248 aa18.37■□□□□ 0.53
SMN2-201ENST00000380741 UBA7P41226 1012 aa18.37■□□□□ 0.53
SMN2-201ENST00000380741 TNFSF9P41273 254 aa18.37■□□□□ 0.53
SMN2-201ENST00000380741 ADCY1Q08828 1119 aa18.37■□□□□ 0.53
SMN2-201ENST00000380741 DHX8Q14562 1220 aaKnown RBP18.37■□□□□ 0.53
SMN2-201ENST00000380741 GPBP1Q86WP2 473 aa18.37■□□□□ 0.53
SMN2-201ENST00000380741 KIF12Q96FN5 646 aa18.37■□□□□ 0.53
SMN2-201ENST00000380741 CALML4Q96GE6 196 aa18.37■□□□□ 0.53
SMN2-201ENST00000380741 M0QZQ0 153 aa18.36■□□□□ 0.53
SMN2-201ENST00000380741 NRG2O14511 850 aaPredicted RBP18.36■□□□□ 0.53
SMN2-201ENST00000380741 HNRNPDLO14979 420 aaKnown RBP18.36■□□□□ 0.53
SMN2-201ENST00000380741 SLC26A4O43511 780 aa18.36■□□□□ 0.53
SMN2-201ENST00000380741 CPB1P15086 417 aa18.36■□□□□ 0.53
SMN2-201ENST00000380741 ANK1P16157 1881 aa18.36■□□□□ 0.53
SMN2-201ENST00000380741 LRPAP1P30533 357 aa18.36■□□□□ 0.53
SMN2-201ENST00000380741 CCR2P41597 374 aa18.36■□□□□ 0.53
SMN2-201ENST00000380741 MCM2P49736 904 aa18.36■□□□□ 0.53
SMN2-201ENST00000380741 LIG4P49917 911 aa18.36■□□□□ 0.53
SMN2-201ENST00000380741 PPP2R3AQ06190 1150 aa18.36■□□□□ 0.53
SMN2-201ENST00000380741 UBXN2BQ14CS0 331 aa18.36■□□□□ 0.53
SMN2-201ENST00000380741 ZBTB6Q15916 424 aa18.36■□□□□ 0.53
SMN2-201ENST00000380741 ZBTB41Q5SVQ8 909 aa18.36■□□□□ 0.53
SMN2-201ENST00000380741 LARP1BQ659C4 914 aaKnown RBP18.36■□□□□ 0.53
SMN2-201ENST00000380741 TANGO2Q6ICL3 276 aa18.36■□□□□ 0.53
SMN2-201ENST00000380741 BLOC1S4Q9NUP1 217 aa18.36■□□□□ 0.53
SMN2-201ENST00000380741 AFF4Q9UHB7 1163 aaKnown RBP18.36■□□□□ 0.53
SMN2-201ENST00000380741 TBX20Q9UMR3 447 aa18.36■□□□□ 0.53
SMN2-201ENST00000380741 MTF2Q9Y483 593 aaPredicted RBP18.36■□□□□ 0.53
SMN2-201ENST00000380741 DMXL1Q9Y485 3027 aa18.36■□□□□ 0.53
SMN2-201ENST00000380741 LACTBL1A8MY62 500 aa18.35■□□□□ 0.53
SMN2-201ENST00000380741 K7ENM7 598 aa18.35■□□□□ 0.53
SMN2-201ENST00000380741 FAM189A1O60320 539 aa18.35■□□□□ 0.53
SMN2-201ENST00000380741 SP9P0CG40 484 aa18.35■□□□□ 0.53
SMN2-201ENST00000380741 CYP3A5P20815 502 aa18.35■□□□□ 0.53
SMN2-201ENST00000380741 CD72P21854 359 aa18.35■□□□□ 0.53
SMN2-201ENST00000380741 FCARP24071 287 aa18.35■□□□□ 0.53
SMN2-201ENST00000380741 MARCKSP29966 332 aaPredicted RBP18.35■□□□□ 0.53
SMN2-201ENST00000380741 GUCY2FP51841 1108 aa18.35■□□□□ 0.53
SMN2-201ENST00000380741 ZNF131P52739 623 aa18.35■□□□□ 0.53
SMN2-201ENST00000380741 GRIN1Q05586 938 aa18.35■□□□□ 0.53
SMN2-201ENST00000380741 TWF1Q12792 350 aa18.35■□□□□ 0.53
SMN2-201ENST00000380741 KARSQ15046 597 aaKnown RBP18.35■□□□□ 0.53
SMN2-201ENST00000380741 ENOX2Q16206 610 aaKnown RBP18.35■□□□□ 0.53
SMN2-201ENST00000380741 RNF19BQ6ZMZ0 732 aa18.35■□□□□ 0.53
SMN2-201ENST00000380741 PDZD4Q76G19 769 aaPredicted RBP18.35■□□□□ 0.53
SMN2-201ENST00000380741 ELMOD1Q8N336 334 aa18.35■□□□□ 0.53
SMN2-201ENST00000380741 MYCT1Q8N699 235 aa18.35■□□□□ 0.53
SMN2-201ENST00000380741 ELSPBP1Q96BH3 223 aa18.35■□□□□ 0.53
SMN2-201ENST00000380741 UPF2Q9HAU5 1272 aaKnown RBP18.35■□□□□ 0.53
SMN2-201ENST00000380741 PARVGQ9HBI0 331 aa18.35■□□□□ 0.53
SMN2-201ENST00000380741 LTB4R2Q9NPC1 389 aa18.35■□□□□ 0.53
SMN2-201ENST00000380741 CEP72Q9P209 647 aa18.35■□□□□ 0.53
SMN2-201ENST00000380741 UBQLN1Q9UMX0 589 aaKnown RBP18.35■□□□□ 0.53
SMN2-201ENST00000380741 TIMM13Q9Y5L4 95 aaPredicted RBP18.35■□□□□ 0.53
SMN2-201ENST00000380741 ZNF197O14709 1029 aa18.34■□□□□ 0.53
SMN2-201ENST00000380741 FAM13AO94988 1023 aa18.34■□□□□ 0.53
SMN2-201ENST00000380741 OAZ2O95190 189 aa18.34■□□□□ 0.53
SMN2-201ENST00000380741 PIGRP01833 764 aa18.34■□□□□ 0.53
SMN2-201ENST00000380741 LMNAP02545 664 aaKnown RBP18.34■□□□□ 0.53
SMN2-201ENST00000380741 PLCG1P19174 1290 aa18.34■□□□□ 0.53
SMN2-201ENST00000380741 AARSP49588 968 aaKnown RBP eCLIP18.34■□□□□ 0.53
SMN2-201ENST00000380741 YWHAHQ04917 246 aaPredicted RBP18.34■□□□□ 0.53
SMN2-201ENST00000380741 MCM6Q14566 821 aa18.34■□□□□ 0.53
SMN2-201ENST00000380741 FAM78AQ5JUQ0 283 aa18.34■□□□□ 0.53
SMN2-201ENST00000380741 IQCEQ6IPM2 695 aa18.34■□□□□ 0.53
SMN2-201ENST00000380741 TPRG1Q6ZUI0 275 aa18.34■□□□□ 0.53
SMN2-201ENST00000380741 MAML2Q8IZL2 1156 aaPredicted RBP18.34■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms