RNA–Protein interactions for RNA: ENST00000380358.8

CHD3-203, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2 BASIC

Gene CHD3, Length 7,356 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-203ENST00000380358 CLUP10909 449 aa13.03□□□□□ -0.32
CHD3-203ENST00000380358 GSSP48637 474 aa13.03□□□□□ -0.32
CHD3-203ENST00000380358 DRAP1Q14919 205 aaPredicted RBP13.03□□□□□ -0.32
CHD3-203ENST00000380358 DCAF6Q58WW2 860 aa13.03□□□□□ -0.32
CHD3-203ENST00000380358 TMEM179Q6ZVK1 233 aa13.03□□□□□ -0.32
CHD3-203ENST00000380358 PODNQ7Z5L7 613 aa13.03□□□□□ -0.32
CHD3-203ENST00000380358 TMC2Q8TDI7 906 aa13.03□□□□□ -0.32
CHD3-203ENST00000380358 TUBGCP3Q96CW5 907 aa13.03□□□□□ -0.32
CHD3-203ENST00000380358 WNK4Q96J92 1243 aa13.03□□□□□ -0.32
CHD3-203ENST00000380358 ZSWIM6Q9HCJ5 1215 aa13.03□□□□□ -0.32
CHD3-203ENST00000380358 IP6K2Q9UHH9 426 aa13.03□□□□□ -0.32
CHD3-203ENST00000380358 TDRKHQ9Y2W6 561 aaKnown RBP13.03□□□□□ -0.32
CHD3-203ENST00000380358 AATKQ6ZMQ8 1374 aa13.03□□□□□ -0.32
CHD3-203ENST00000380358 NBPF26B4DH59 902 aa13.03□□□□□ -0.32
CHD3-203ENST00000380358 CYP26A1O43174 497 aa13.03□□□□□ -0.32
CHD3-203ENST00000380358 CYP19A1P11511 503 aaPredicted RBP13.03□□□□□ -0.32
CHD3-203ENST00000380358 CLK1P49759 484 aaKnown RBP13.03□□□□□ -0.32
CHD3-203ENST00000380358 PRMT1Q99873 361 aaKnown RBP13.03□□□□□ -0.32
CHD3-203ENST00000380358 CRLS1Q9UJA2 301 aa13.03□□□□□ -0.32
CHD3-203ENST00000380358 ADAM21Q9UKJ8 722 aa13.03□□□□□ -0.32
CHD3-203ENST00000380358 FHOD1Q9Y613 1164 aa13.03□□□□□ -0.32
CHD3-203ENST00000380358 CHURC1-FNTBB4DL54 471 aa13.03□□□□□ -0.32
CHD3-203ENST00000380358 PRIM2P49643 509 aa13.03□□□□□ -0.32
CHD3-203ENST00000380358 SLC25A24Q6NUK1 477 aa13.03□□□□□ -0.32
CHD3-203ENST00000380358 ZNF438Q7Z4V0 828 aa13.03□□□□□ -0.32
CHD3-203ENST00000380358 PCF11O94913 1555 aaKnown RBP13.03□□□□□ -0.32
CHD3-203ENST00000380358 PP2D1A8MPX8 630 aa13.03□□□□□ -0.32
CHD3-203ENST00000380358 E9PBE3 544 aa13.03□□□□□ -0.32
CHD3-203ENST00000380358 SUSD4Q5VX71 490 aa13.03□□□□□ -0.32
CHD3-203ENST00000380358 ICE2Q659A1 982 aa13.03□□□□□ -0.32
CHD3-203ENST00000380358 ANO5Q75V66 913 aa13.03□□□□□ -0.32
CHD3-203ENST00000380358 TMC4Q7Z404 712 aa13.03□□□□□ -0.32
CHD3-203ENST00000380358 RGL4Q8IZJ4 473 aa13.03□□□□□ -0.32
CHD3-203ENST00000380358 THAP11Q96EK4 314 aa13.03□□□□□ -0.32
CHD3-203ENST00000380358 UNKQ9C0B0 810 aaKnown RBP13.03□□□□□ -0.32
CHD3-203ENST00000380358 PADI4Q9UM07 663 aa13.03□□□□□ -0.32
CHD3-203ENST00000380358 TBX3O15119 743 aa13.02□□□□□ -0.32
CHD3-203ENST00000380358 TEX28O15482 410 aa13.02□□□□□ -0.32
CHD3-203ENST00000380358 HARS2P49590 506 aaKnown RBP13.02□□□□□ -0.32
CHD3-203ENST00000380358 KCNH2Q12809 1159 aa13.02□□□□□ -0.32
CHD3-203ENST00000380358 ARHGAP15Q53QZ3 475 aa13.02□□□□□ -0.32
CHD3-203ENST00000380358 GLRA4Q5JXX5 417 aa13.02□□□□□ -0.32
CHD3-203ENST00000380358 C11orf88Q6PI97 169 aa13.02□□□□□ -0.32
CHD3-203ENST00000380358 UNC5CLQ8IV45 518 aa13.02□□□□□ -0.32
CHD3-203ENST00000380358 YME1L1Q96TA2 773 aa13.02□□□□□ -0.32
CHD3-203ENST00000380358 CCT7Q99832 543 aa13.02□□□□□ -0.32
CHD3-203ENST00000380358 CIPCQ9C0C6 399 aa13.02□□□□□ -0.32
CHD3-203ENST00000380358 DDX47Q9H0S4 455 aaKnown RBP13.02□□□□□ -0.32
CHD3-203ENST00000380358 GMFGO60234 142 aa13.02□□□□□ -0.32
CHD3-203ENST00000380358 KPNA1P52294 538 aaPredicted RBP13.02□□□□□ -0.32
CHD3-203ENST00000380358 KLHL38Q2WGJ6 581 aa13.02□□□□□ -0.32
CHD3-203ENST00000380358 IZUMO3Q5VZ72 239 aa13.02□□□□□ -0.32
CHD3-203ENST00000380358 RNF26Q9BY78 433 aaPredicted RBP13.02□□□□□ -0.32
CHD3-203ENST00000380358 TRAPPC3O43617 180 aa13.02□□□□□ -0.32
CHD3-203ENST00000380358 RHOBTB1O94844 696 aa13.02□□□□□ -0.32
CHD3-203ENST00000380358 FNTAP49354 379 aa13.02□□□□□ -0.32
CHD3-203ENST00000380358 APBA1Q02410 837 aa13.02□□□□□ -0.32
CHD3-203ENST00000380358 IL17REQ8NFR9 667 aa13.02□□□□□ -0.32
CHD3-203ENST00000380358 PPIL4Q8WUA2 492 aaKnown RBP eCLIP13.02□□□□□ -0.32
CHD3-203ENST00000380358 MED8Q96G25 268 aa13.02□□□□□ -0.32
CHD3-203ENST00000380358 FAM167AQ96KS9 214 aa13.02□□□□□ -0.32
CHD3-203ENST00000380358 CUEDC2Q9H467 287 aa13.02□□□□□ -0.32
CHD3-203ENST00000380358 PIH1D3Q9NQM4 214 aaKnown RBP13.02□□□□□ -0.32
CHD3-203ENST00000380358 PKD2L2Q9NZM6 624 aa13.02□□□□□ -0.32
CHD3-203ENST00000380358 EHD2Q9NZN4 543 aa13.02□□□□□ -0.32
CHD3-203ENST00000380358 POLR1DQ9Y2S0 133 aa13.02□□□□□ -0.32
CHD3-203ENST00000380358 EMSYQ7Z589 1322 aa13.02□□□□□ -0.33
CHD3-203ENST00000380358 BFSP2Q13515 415 aa13.02□□□□□ -0.33
CHD3-203ENST00000380358 HPS3Q969F9 1004 aa13.02□□□□□ -0.33
CHD3-203ENST00000380358 OPTNQ96CV9 577 aa13.02□□□□□ -0.33
CHD3-203ENST00000380358 MRPL39Q9NYK5 338 aaKnown RBP13.02□□□□□ -0.33
CHD3-203ENST00000380358 HDAC6Q9UBN7 1215 aa13.02□□□□□ -0.33
CHD3-203ENST00000380358 ARHGEF10O15013 1369 aa13.02□□□□□ -0.33
CHD3-203ENST00000380358 A0A087WUV0 522 aaPredicted RBP13.02□□□□□ -0.33
CHD3-203ENST00000380358 C3orf70A6NLC5 250 aaPredicted RBP13.02□□□□□ -0.33
CHD3-203ENST00000380358 STRNO43815 780 aa13.02□□□□□ -0.33
CHD3-203ENST00000380358 CELF2O95319 508 aaKnown RBP13.02□□□□□ -0.33
CHD3-203ENST00000380358 ALDH7A1P49419 539 aaKnown RBP13.02□□□□□ -0.33
CHD3-203ENST00000380358 STARD3Q14849 445 aa13.02□□□□□ -0.33
CHD3-203ENST00000380358 B3GALNT2Q8NCR0 500 aa13.02□□□□□ -0.33
CHD3-203ENST00000380358 BLOC1S5Q8TDH9 187 aa13.02□□□□□ -0.33
CHD3-203ENST00000380358 OSBPL6Q9BZF3 934 aa13.02□□□□□ -0.33
CHD3-203ENST00000380358 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP13.02□□□□□ -0.33
CHD3-203ENST00000380358 EEF2KO00418 725 aaKnown RBP13.02□□□□□ -0.33
CHD3-203ENST00000380358 PRKCBP05771 671 aa13.02□□□□□ -0.33
CHD3-203ENST00000380358 ITGA4P13612 1032 aa13.02□□□□□ -0.33
CHD3-203ENST00000380358 DSG3P32926 999 aa13.02□□□□□ -0.33
CHD3-203ENST00000380358 KRT20P35900 424 aa13.02□□□□□ -0.33
CHD3-203ENST00000380358 RUNX1T1Q06455 604 aa13.02□□□□□ -0.33
CHD3-203ENST00000380358 KCNB1Q14721 858 aa13.02□□□□□ -0.33
CHD3-203ENST00000380358 CCDC103Q8IW40 242 aa13.02□□□□□ -0.33
CHD3-203ENST00000380358 CHORDC1Q9UHD1 332 aaPredicted RBP13.02□□□□□ -0.33
CHD3-203ENST00000380358 HSMCR30P0CW71 290 aa13.01□□□□□ -0.33
CHD3-203ENST00000380358 HAUS6Q7Z4H7 955 aa13.01□□□□□ -0.33
CHD3-203ENST00000380358 GATAD2AQ86YP4 633 aa13.01□□□□□ -0.33
CHD3-203ENST00000380358 KLF6Q99612 283 aaPredicted RBP13.01□□□□□ -0.33
CHD3-203ENST00000380358 INTS2Q9H0H0 1204 aaKnown RBP13.01□□□□□ -0.33
CHD3-203ENST00000380358 ASS1P00966 412 aaKnown RBP13.01□□□□□ -0.33
CHD3-203ENST00000380358 FGFR2P21802 821 aa13.01□□□□□ -0.33
CHD3-203ENST00000380358 PRDX5P30044 214 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms