RNA–Protein interactions for RNA: ENST00000379361.4

PTCHD1-201, Transcript of patched domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTCHD1, Length 13,714 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD1-201ENST00000379361 C10orf88Q9H8K7 445 aa11.76□□□□□ -0.53
PTCHD1-201ENST00000379361 WDR62O43379 1518 aa11.76□□□□□ -0.53
PTCHD1-201ENST00000379361 ZBTB5O15062 677 aa11.76□□□□□ -0.53
PTCHD1-201ENST00000379361 TAF13Q15543 124 aa11.76□□□□□ -0.53
PTCHD1-201ENST00000379361 PID1Q7Z2X4 250 aa11.76□□□□□ -0.53
PTCHD1-201ENST00000379361 PPCSQ9HAB8 311 aa11.76□□□□□ -0.53
PTCHD1-201ENST00000379361 ALDH7A1P49419 539 aaKnown RBP11.76□□□□□ -0.53
PTCHD1-201ENST00000379361 SPIRE2Q8WWL2 714 aa11.76□□□□□ -0.53
PTCHD1-201ENST00000379361 ABCB11O95342 1321 aa11.76□□□□□ -0.53
PTCHD1-201ENST00000379361 USPL1Q5W0Q7 1092 aa11.76□□□□□ -0.53
PTCHD1-201ENST00000379361 RFWD2Q8NHY2 731 aa11.76□□□□□ -0.53
PTCHD1-201ENST00000379361 CMTM5Q96DZ9 223 aa11.76□□□□□ -0.53
PTCHD1-201ENST00000379361 SH3GL3Q99963 347 aa11.76□□□□□ -0.53
PTCHD1-201ENST00000379361 H7C4K7 107 aa11.76□□□□□ -0.53
PTCHD1-201ENST00000379361 RIC8BQ9NVN3 520 aa11.76□□□□□ -0.53
PTCHD1-201ENST00000379361 FBXO2Q9UK22 296 aaPredicted RBP11.76□□□□□ -0.53
PTCHD1-201ENST00000379361 SNAPC2Q13487 334 aa11.76□□□□□ -0.53
PTCHD1-201ENST00000379361 USP28Q96RU2 1077 aa11.76□□□□□ -0.53
PTCHD1-201ENST00000379361 COQ6Q9Y2Z9 468 aa11.76□□□□□ -0.53
PTCHD1-201ENST00000379361 ECDO95905 644 aaPredicted RBP11.75□□□□□ -0.53
PTCHD1-201ENST00000379361 CDC27P30260 824 aa11.75□□□□□ -0.53
PTCHD1-201ENST00000379361 MTERF3Q96E29 417 aa11.75□□□□□ -0.53
PTCHD1-201ENST00000379361 DNAJC1Q96KC8 554 aaKnown RBP11.75□□□□□ -0.53
PTCHD1-201ENST00000379361 MRPL1Q9BYD6 325 aaKnown RBP11.75□□□□□ -0.53
PTCHD1-201ENST00000379361 WWP1Q9H0M0 922 aa11.75□□□□□ -0.53
PTCHD1-201ENST00000379361 SYNMO15061 1565 aa11.75□□□□□ -0.53
PTCHD1-201ENST00000379361 FEN1P39748 380 aaKnown RBP11.75□□□□□ -0.53
PTCHD1-201ENST00000379361 PTK6Q13882 451 aa11.75□□□□□ -0.53
PTCHD1-201ENST00000379361 FAM213AQ9BRX8 229 aa11.75□□□□□ -0.53
PTCHD1-201ENST00000379361 ITSN1Q15811 1721 aa11.75□□□□□ -0.53
PTCHD1-201ENST00000379361 VGLL3A8MV65 326 aa11.75□□□□□ -0.53
PTCHD1-201ENST00000379361 KIAA0391O15091 583 aaKnown RBP11.75□□□□□ -0.53
PTCHD1-201ENST00000379361 CYP4Z1Q86W10 505 aa11.75□□□□□ -0.53
PTCHD1-201ENST00000379361 SPRTNQ9H040 489 aaPredicted RBP11.75□□□□□ -0.53
PTCHD1-201ENST00000379361 RNF103O00237 685 aa11.75□□□□□ -0.53
PTCHD1-201ENST00000379361 KIFC1Q9BW19 673 aa11.75□□□□□ -0.53
PTCHD1-201ENST00000379361 CINPQ9BW66 212 aaPredicted RBP11.75□□□□□ -0.53
PTCHD1-201ENST00000379361 MFSD1Q9H3U5 465 aa11.75□□□□□ -0.53
PTCHD1-201ENST00000379361 CLIC4Q9Y696 253 aa11.75□□□□□ -0.53
PTCHD1-201ENST00000379361 MOCS2O96007 188 aaPredicted RBP11.75□□□□□ -0.53
PTCHD1-201ENST00000379361 MYL2P10916 166 aa11.75□□□□□ -0.53
PTCHD1-201ENST00000379361 POLD3Q15054 466 aaPredicted RBP11.75□□□□□ -0.53
PTCHD1-201ENST00000379361 RAB23Q9ULC3 237 aa11.75□□□□□ -0.53
PTCHD1-201ENST00000379361 SERPINB3P29508 390 aa11.75□□□□□ -0.53
PTCHD1-201ENST00000379361 RALGDSQ12967 914 aa11.75□□□□□ -0.53
PTCHD1-201ENST00000379361 TSC22D1Q15714 1073 aa11.75□□□□□ -0.53
PTCHD1-201ENST00000379361 COPG2Q9UBF2 871 aa11.75□□□□□ -0.53
PTCHD1-201ENST00000379361 ITGAXP20702 1163 aa11.75□□□□□ -0.53
PTCHD1-201ENST00000379361 TERB1Q8NA31 727 aa11.75□□□□□ -0.53
PTCHD1-201ENST00000379361 POLR3FQ9H1D9 316 aaPredicted RBP11.75□□□□□ -0.53
PTCHD1-201ENST00000379361 ZFYVE28Q9HCC9 887 aa11.75□□□□□ -0.53
PTCHD1-201ENST00000379361 POTEIP0CG38 1075 aa11.75□□□□□ -0.53
PTCHD1-201ENST00000379361 SLC30A1Q9Y6M5 507 aa11.75□□□□□ -0.53
PTCHD1-201ENST00000379361 PFASO15067 1338 aa11.75□□□□□ -0.53
PTCHD1-201ENST00000379361 EIF4E1BA6NMX2 242 aaKnown RBP11.75□□□□□ -0.53
PTCHD1-201ENST00000379361 A8MXQ7 604 aa11.75□□□□□ -0.53
PTCHD1-201ENST00000379361 RARBP10826 455 aa11.75□□□□□ -0.53
PTCHD1-201ENST00000379361 SULT1E1P49888 294 aa11.75□□□□□ -0.53
PTCHD1-201ENST00000379361 CDK5RAP1Q96SZ6 601 aaKnown RBP11.75□□□□□ -0.53
PTCHD1-201ENST00000379361 CCT7Q99832 543 aa11.75□□□□□ -0.53
PTCHD1-201ENST00000379361 NOVA2Q9UNW9 492 aaKnown RBP11.75□□□□□ -0.53
PTCHD1-201ENST00000379361 A0A0D9SFI3 127 aa11.74□□□□□ -0.53
PTCHD1-201ENST00000379361 STAMBPL1Q96FJ0 436 aa11.74□□□□□ -0.53
PTCHD1-201ENST00000379361 CHL1O00533 1208 aa11.74□□□□□ -0.53
PTCHD1-201ENST00000379361 FAM83BQ5T0W9 1011 aa11.74□□□□□ -0.53
PTCHD1-201ENST00000379361 DENND6AQ8IWF6 608 aa11.74□□□□□ -0.53
PTCHD1-201ENST00000379361 THAP11Q96EK4 314 aa11.74□□□□□ -0.53
PTCHD1-201ENST00000379361 TINF2Q9BSI4 451 aa11.74□□□□□ -0.53
PTCHD1-201ENST00000379361 GREM2Q9H772 168 aa11.74□□□□□ -0.53
PTCHD1-201ENST00000379361 PIN4Q9Y237 131 aaKnown RBP11.74□□□□□ -0.53
PTCHD1-201ENST00000379361 EEF2KMTQ96G04 330 aa11.74□□□□□ -0.53
PTCHD1-201ENST00000379361 GTF3C1Q12789 2109 aa11.74□□□□□ -0.53
PTCHD1-201ENST00000379361 PHACTR4Q8IZ21 702 aa11.74□□□□□ -0.53
PTCHD1-201ENST00000379361 F5H423 210 aaPredicted RBP11.74□□□□□ -0.53
PTCHD1-201ENST00000379361 CDH6P55285 790 aa11.74□□□□□ -0.53
PTCHD1-201ENST00000379361 RPS7P62081 194 aaKnown RBP11.74□□□□□ -0.53
PTCHD1-201ENST00000379361 LINC00523Q86TU6 105 aa11.74□□□□□ -0.53
PTCHD1-201ENST00000379361 C11orf74Q86VG3 221 aa11.74□□□□□ -0.53
PTCHD1-201ENST00000379361 INPP5DQ92835 1189 aa11.74□□□□□ -0.53
PTCHD1-201ENST00000379361 CAPN10Q9HC96 672 aa11.74□□□□□ -0.53
PTCHD1-201ENST00000379361 SEC24BO95487 1268 aa11.74□□□□□ -0.53
PTCHD1-201ENST00000379361 CPT1AP50416 773 aa11.74□□□□□ -0.53
PTCHD1-201ENST00000379361 SCRN1Q12765 414 aa11.74□□□□□ -0.53
PTCHD1-201ENST00000379361 PPP1R18Q6NYC8 613 aa11.74□□□□□ -0.53
PTCHD1-201ENST00000379361 CAMKK1Q8N5S9 505 aa11.74□□□□□ -0.53
PTCHD1-201ENST00000379361 EMILIN2Q9BXX0 1053 aa11.74□□□□□ -0.53
PTCHD1-201ENST00000379361 ENTPD7Q9NQZ7 604 aa11.74□□□□□ -0.53
PTCHD1-201ENST00000379361 CNOT8Q9UFF9 292 aaKnown RBP11.74□□□□□ -0.53
PTCHD1-201ENST00000379361 USP17L5A8MUK1 530 aa11.74□□□□□ -0.53
PTCHD1-201ENST00000379361 HAUS5O94927 633 aa11.74□□□□□ -0.53
PTCHD1-201ENST00000379361 FTCDO95954 541 aa11.74□□□□□ -0.53
PTCHD1-201ENST00000379361 EGFRP00533 1210 aa11.74□□□□□ -0.53
PTCHD1-201ENST00000379361 RPLP2P05387 115 aaKnown RBP11.74□□□□□ -0.53
PTCHD1-201ENST00000379361 TGS1Q96RS0 853 aaKnown RBP11.74□□□□□ -0.53
PTCHD1-201ENST00000379361 DYRK1BQ9Y463 629 aa11.74□□□□□ -0.53
PTCHD1-201ENST00000379361 SLC1A1P43005 524 aa11.74□□□□□ -0.53
PTCHD1-201ENST00000379361 KCNK10P57789 538 aa11.74□□□□□ -0.53
PTCHD1-201ENST00000379361 IL31Q6EBC2 164 aa11.74□□□□□ -0.53
PTCHD1-201ENST00000379361 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.74□□□□□ -0.53
PTCHD1-201ENST00000379361 ASZ1Q8WWH4 475 aa11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms