RNA–Protein interactions for RNA: ENST00000379215.8

ECHDC3-201, Transcript of enoyl-CoA hydratase domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ECHDC3, Length 1,649 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC3-201ENST00000379215 UTP3Q9NQZ2 479 aaKnown RBP eCLIP26.37■■□□□ 1.813e-10■■■■■ 153.8
ECHDC3-201ENST00000379215 SLC38A7Q9NVC3 462 aa26.37■■□□□ 1.81
ECHDC3-201ENST00000379215 BPIFB4P59827 614 aa26.36■■□□□ 1.81
ECHDC3-201ENST00000379215 MYO1EQ12965 1108 aa26.36■■□□□ 1.81
ECHDC3-201ENST00000379215 ZNF667Q5HYK9 610 aa26.36■■□□□ 1.81
ECHDC3-201ENST00000379215 C17orf53Q8N3J3 647 aaPredicted RBP26.36■■□□□ 1.81
ECHDC3-201ENST00000379215 KAT5Q92993 513 aa26.36■■□□□ 1.81
ECHDC3-201ENST00000379215 PPP1R13BQ96KQ4 1090 aa26.36■■□□□ 1.81
ECHDC3-201ENST00000379215 ADAM2Q99965 735 aa26.36■■□□□ 1.81
ECHDC3-201ENST00000379215 NUB1Q9Y5A7 615 aa26.36■■□□□ 1.81
ECHDC3-201ENST00000379215 SMIM28A0A1B0GU29 152 aa26.36■■□□□ 1.81
ECHDC3-201ENST00000379215 RBAK-RBAKDNI3L0D1 243 aa26.36■■□□□ 1.81
ECHDC3-201ENST00000379215 POLR2BP30876 1174 aaKnown RBP26.36■■□□□ 1.81
ECHDC3-201ENST00000379215 USP8P40818 1118 aa26.36■■□□□ 1.81
ECHDC3-201ENST00000379215 ATN1P54259 1190 aaPredicted RBP26.36■■□□□ 1.81
ECHDC3-201ENST00000379215 PTK2Q05397 1052 aa26.36■■□□□ 1.81
ECHDC3-201ENST00000379215 BMS1Q14692 1282 aaKnown RBP26.36■■□□□ 1.81
ECHDC3-201ENST00000379215 SLC18A3Q16572 532 aa26.36■■□□□ 1.81
ECHDC3-201ENST00000379215 SPOPLQ6IQ16 392 aa26.36■■□□□ 1.81
ECHDC3-201ENST00000379215 LRRC52Q8N7C0 313 aa26.36■■□□□ 1.81
ECHDC3-201ENST00000379215 APBB2Q92870 758 aa26.36■■□□□ 1.81
ECHDC3-201ENST00000379215 ZMAT2Q96NC0 199 aaKnown RBP26.36■■□□□ 1.81
ECHDC3-201ENST00000379215 RPS6KC1Q96S38 1066 aa26.36■■□□□ 1.81
ECHDC3-201ENST00000379215 RNF39Q9H2S5 420 aa26.36■■□□□ 1.81
ECHDC3-201ENST00000379215 C11orf49Q9H6J7 331 aa26.36■■□□□ 1.81
ECHDC3-201ENST00000379215 TRMT1Q9NXH9 659 aaKnown RBP26.36■■□□□ 1.81
ECHDC3-201ENST00000379215 ATF7P17544 494 aaPredicted RBP26.35■■□□□ 1.81
ECHDC3-201ENST00000379215 MBTPS1Q14703 1052 aa26.35■■□□□ 1.81
ECHDC3-201ENST00000379215 C10orf76Q5T2E6 689 aa26.35■■□□□ 1.81
ECHDC3-201ENST00000379215 CXorf38Q8TB03 319 aa26.35■■□□□ 1.81
ECHDC3-201ENST00000379215 RGS18Q9NS28 235 aa26.35■■□□□ 1.81
ECHDC3-201ENST00000379215 AGAP1Q9UPQ3 857 aa26.35■■□□□ 1.81
ECHDC3-201ENST00000379215 TUBB4AP04350 444 aa26.34■■□□□ 1.81
ECHDC3-201ENST00000379215 PNMA6AP0CW24 399 aaPredicted RBP26.34■■□□□ 1.81
ECHDC3-201ENST00000379215 TTC39CQ8N584 583 aa26.34■■□□□ 1.81
ECHDC3-201ENST00000379215 ACRBPQ8NEB7 543 aa26.34■■□□□ 1.81
ECHDC3-201ENST00000379215 HPDLQ96IR7 371 aa26.34■■□□□ 1.81
ECHDC3-201ENST00000379215 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP26.34■■□□□ 1.81
ECHDC3-201ENST00000379215 HIPK3Q9H422 1215 aa26.34■■□□□ 1.81
ECHDC3-201ENST00000379215 KIF2AO00139 706 aaPredicted RBP26.33■■□□□ 1.81
ECHDC3-201ENST00000379215 MGEA5O60502 916 aa26.33■■□□□ 1.81
ECHDC3-201ENST00000379215 KRT5P13647 590 aa26.33■■□□□ 1.81
ECHDC3-201ENST00000379215 PNPLA4P41247 253 aa26.33■■□□□ 1.81
ECHDC3-201ENST00000379215 PDE6CP51160 858 aa26.33■■□□□ 1.81
ECHDC3-201ENST00000379215 TRIM60Q495X7 471 aa26.33■■□□□ 1.81
ECHDC3-201ENST00000379215 ZNF662Q6ZS27 426 aa26.33■■□□□ 1.81
ECHDC3-201ENST00000379215 ZNF571Q7Z3V5 609 aaPredicted RBP26.33■■□□□ 1.81
ECHDC3-201ENST00000379215 ZNF560Q96MR9 790 aa26.33■■□□□ 1.81
ECHDC3-201ENST00000379215 OSBPL7Q9BZF2 842 aa26.33■■□□□ 1.81
ECHDC3-201ENST00000379215 CYP3A43Q9HB55 503 aa26.33■■□□□ 1.81
ECHDC3-201ENST00000379215 PRDM10Q9NQV6 1147 aa26.33■■□□□ 1.81
ECHDC3-201ENST00000379215 KLK14Q9P0G3 267 aa26.33■■□□□ 1.81
ECHDC3-201ENST00000379215 CNTN6Q9UQ52 1028 aa26.33■■□□□ 1.81
ECHDC3-201ENST00000379215 TLE2Q04725 743 aa26.32■■□□□ 1.8
ECHDC3-201ENST00000379215 SLC24A5Q71RS6 500 aa26.32■■□□□ 1.8
ECHDC3-201ENST00000379215 KIAA1328Q86T90 577 aa26.32■■□□□ 1.8
ECHDC3-201ENST00000379215 SEPT8Q92599 483 aa26.32■■□□□ 1.8
ECHDC3-201ENST00000379215 TSGA10Q9BZW7 698 aa26.32■■□□□ 1.8
ECHDC3-201ENST00000379215 ATP8B3O60423 1300 aa26.32■■□□□ 1.8
ECHDC3-201ENST00000379215 USP27XA6NNY8 438 aa26.32■■□□□ 1.8
ECHDC3-201ENST00000379215 EOMESO95936 686 aa26.32■■□□□ 1.8
ECHDC3-201ENST00000379215 ACO1P21399 889 aaKnown RBP26.32■■□□□ 1.8
ECHDC3-201ENST00000379215 FAAP100Q0VG06 881 aa26.32■■□□□ 1.8
ECHDC3-201ENST00000379215 WDR72Q3MJ13 1102 aa26.32■■□□□ 1.8
ECHDC3-201ENST00000379215 GLRA4Q5JXX5 417 aa26.32■■□□□ 1.8
ECHDC3-201ENST00000379215 GPIHBP1Q8IV16 184 aa26.32■■□□□ 1.8
ECHDC3-201ENST00000379215 REXO1L1PQ8IX06 675 aa26.32■■□□□ 1.8
ECHDC3-201ENST00000379215 ARID3AQ99856 593 aa26.32■■□□□ 1.8
ECHDC3-201ENST00000379215 RSAD1Q9HA92 442 aa26.32■■□□□ 1.8
ECHDC3-201ENST00000379215 TUBGCP4Q9UGJ1 667 aa26.32■■□□□ 1.8
ECHDC3-201ENST00000379215 PCDHB4Q9Y5E5 795 aa26.32■■□□□ 1.8
ECHDC3-201ENST00000379215 TNNC1P63316 161 aa26.31■■□□□ 1.8
ECHDC3-201ENST00000379215 ARHGAP29Q52LW3 1261 aa26.31■■□□□ 1.8
ECHDC3-201ENST00000379215 NECAB2Q7Z6G3 386 aa26.31■■□□□ 1.8
ECHDC3-201ENST00000379215 ZNF677Q86XU0 584 aa26.31■■□□□ 1.8
ECHDC3-201ENST00000379215 ECHDC2Q86YB7 292 aa26.31■■□□□ 1.8
ECHDC3-201ENST00000379215 DIS3LQ8TF46 1054 aaKnown RBP26.31■■□□□ 1.8
ECHDC3-201ENST00000379215 PPP1R10Q96QC0 940 aaKnown RBP26.31■■□□□ 1.8
ECHDC3-201ENST00000379215 BCO2Q9BYV7 579 aa26.31■■□□□ 1.8
ECHDC3-201ENST00000379215 TSPYL2Q9H2G4 693 aaPredicted RBP26.31■■□□□ 1.8
ECHDC3-201ENST00000379215 ADAMTS1Q9UHI8 967 aa26.31■■□□□ 1.8
ECHDC3-201ENST00000379215 CYP26A1O43174 497 aa26.3■■□□□ 1.8
ECHDC3-201ENST00000379215 MLH1P40692 756 aa26.3■■□□□ 1.8
ECHDC3-201ENST00000379215 ASPAP45381 313 aa26.3■■□□□ 1.8
ECHDC3-201ENST00000379215 VAV2P52735 878 aa26.3■■□□□ 1.8
ECHDC3-201ENST00000379215 GFPT1Q06210 699 aaPredicted RBP26.3■■□□□ 1.8
ECHDC3-201ENST00000379215 PTPN14Q15678 1187 aa26.3■■□□□ 1.8
ECHDC3-201ENST00000379215 PLEKHG4Q58EX7 1191 aa26.3■■□□□ 1.8
ECHDC3-201ENST00000379215 C9orf57Q5W0N0 161 aa26.3■■□□□ 1.8
ECHDC3-201ENST00000379215 UBR7Q8N806 425 aa26.3■■□□□ 1.8
ECHDC3-201ENST00000379215 EPS8L1Q8TE68 723 aa26.3■■□□□ 1.8
ECHDC3-201ENST00000379215 AGPAT1Q99943 283 aa26.3■■□□□ 1.8
ECHDC3-201ENST00000379215 RNF216Q9NWF9 866 aaPredicted RBP26.3■■□□□ 1.8
ECHDC3-201ENST00000379215 NXF1Q9UBU9 619 aaKnown RBP26.3■■□□□ 1.8
ECHDC3-201ENST00000379215 REXO2Q9Y3B8 237 aaKnown RBP26.3■■□□□ 1.8
ECHDC3-201ENST00000379215 UMODL1Q5DID0 1318 aa26.3■■□□□ 1.8
ECHDC3-201ENST00000379215 ANO9A1A5B4 782 aa26.29■■□□□ 1.8
ECHDC3-201ENST00000379215 NBNO60934 754 aa26.29■■□□□ 1.8
ECHDC3-201ENST00000379215 THP07101 528 aa26.29■■□□□ 1.8
ECHDC3-201ENST00000379215 CYP11B1P15538 503 aa26.29■■□□□ 1.8
Retrieved 100 of 20,778 RNA–protein pairs in 62.8 ms