RNA–Protein interactions for RNA: ENST00000379018.7

PDLIM4-202, Transcript of PDZ and LIM domain 4, humanhuman

TSL 1 (best) BASIC

Gene PDLIM4, Length 1,006 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM4-202ENST00000379018 NRLP54845 237 aa19.48■□□□□ 0.71
PDLIM4-202ENST00000379018 PEX3P56589 373 aa19.48■□□□□ 0.71
PDLIM4-202ENST00000379018 SATB1Q01826 763 aa19.48■□□□□ 0.71
PDLIM4-202ENST00000379018 SAFBQ15424 915 aaKnown RBP eCLIP19.48■□□□□ 0.71
PDLIM4-202ENST00000379018 HAUS3Q68CZ6 603 aa19.48■□□□□ 0.71
PDLIM4-202ENST00000379018 GPIHBP1Q8IV16 184 aa19.48■□□□□ 0.71
PDLIM4-202ENST00000379018 TCEAL8Q8IYN2 117 aa19.48■□□□□ 0.71
PDLIM4-202ENST00000379018 ZSCAN18Q8TBC5 510 aaPredicted RBP19.48■□□□□ 0.71
PDLIM4-202ENST00000379018 KIFAP3Q92845 792 aa19.48■□□□□ 0.71
PDLIM4-202ENST00000379018 SMARCD2Q92925 531 aa19.48■□□□□ 0.71
PDLIM4-202ENST00000379018 ZNF512Q96ME7 567 aaPredicted RBP19.48■□□□□ 0.71
PDLIM4-202ENST00000379018 TCHPQ9BT92 498 aa19.48■□□□□ 0.71
PDLIM4-202ENST00000379018 TARS2Q9BW92 718 aaKnown RBP19.48■□□□□ 0.71
PDLIM4-202ENST00000379018 LOC105378220A0A1B0GUY1 285 aaPredicted RBP19.47■□□□□ 0.71
PDLIM4-202ENST00000379018 ZNF263O14978 683 aa19.47■□□□□ 0.71
PDLIM4-202ENST00000379018 SYN3O14994 580 aa19.47■□□□□ 0.71
PDLIM4-202ENST00000379018 TDGF1P13385 188 aa19.47■□□□□ 0.71
PDLIM4-202ENST00000379018 CCR3P51677 355 aa19.47■□□□□ 0.71
PDLIM4-202ENST00000379018 TEAD2Q15562 447 aa19.47■□□□□ 0.71
PDLIM4-202ENST00000379018 HEATR6Q6AI08 1181 aaKnown RBP19.47■□□□□ 0.71
PDLIM4-202ENST00000379018 ZNF280DQ6N043 979 aa19.47■□□□□ 0.71
PDLIM4-202ENST00000379018 TMEM130Q8N3G9 435 aa19.47■□□□□ 0.71
PDLIM4-202ENST00000379018 ACAP3Q96P50 834 aa19.47■□□□□ 0.71
PDLIM4-202ENST00000379018 ACO2Q99798 780 aaKnown RBP19.47■□□□□ 0.71
PDLIM4-202ENST00000379018 MRPL4Q9BYD3 311 aaKnown RBP19.47■□□□□ 0.71
PDLIM4-202ENST00000379018 ASAH2Q9NR71 780 aa19.47■□□□□ 0.71
PDLIM4-202ENST00000379018 RBM12Q9NTZ6 932 aaKnown RBP19.47■□□□□ 0.71
PDLIM4-202ENST00000379018 CEP72Q9P209 647 aa19.47■□□□□ 0.71
PDLIM4-202ENST00000379018 KIAA1024Q9UPX6 916 aa19.47■□□□□ 0.71
PDLIM4-202ENST00000379018 COL4A2P08572 1712 aa19.47■□□□□ 0.71
PDLIM4-202ENST00000379018 PHLPP2Q6ZVD8 1323 aa19.47■□□□□ 0.71
PDLIM4-202ENST00000379018 PDCD11Q14690 1871 aaKnown RBP19.46■□□□□ 0.71
PDLIM4-202ENST00000379018 CHURC1-FNTBB4DL54 471 aa19.46■□□□□ 0.71
PDLIM4-202ENST00000379018 FNTBP49356 437 aa19.46■□□□□ 0.71
PDLIM4-202ENST00000379018 SRSF5Q13243 272 aaKnown RBP19.46■□□□□ 0.71
PDLIM4-202ENST00000379018 SIM2Q14190 667 aaPredicted RBP19.46■□□□□ 0.71
PDLIM4-202ENST00000379018 LAIR1Q6GTX8 287 aa19.46■□□□□ 0.71
PDLIM4-202ENST00000379018 ARHGAP30Q7Z6I6 1101 aaPredicted RBP19.46■□□□□ 0.71
PDLIM4-202ENST00000379018 MAP4K3Q8IVH8 894 aa19.46■□□□□ 0.71
PDLIM4-202ENST00000379018 YAF2Q8IY57 180 aa19.46■□□□□ 0.71
PDLIM4-202ENST00000379018 ZNF687Q8N1G0 1237 aa19.46■□□□□ 0.71
PDLIM4-202ENST00000379018 TTC8Q8TAM2 541 aa19.46■□□□□ 0.71
PDLIM4-202ENST00000379018 CSGALNACT1Q8TDX6 532 aa19.46■□□□□ 0.71
PDLIM4-202ENST00000379018 DDX19AQ9NUU7 478 aaKnown RBP19.46■□□□□ 0.71
PDLIM4-202ENST00000379018 ANKFY1Q9P2R3 1169 aa19.46■□□□□ 0.71
PDLIM4-202ENST00000379018 NCANO14594 1321 aa19.46■□□□□ 0.71
PDLIM4-202ENST00000379018 HEPACAM2A8MVW5 462 aa19.45■□□□□ 0.7
PDLIM4-202ENST00000379018 NPTX2P47972 431 aa19.45■□□□□ 0.7
PDLIM4-202ENST00000379018 CXCL12P48061 93 aa19.45■□□□□ 0.7
PDLIM4-202ENST00000379018 SOX9P48436 509 aa19.45■□□□□ 0.7
PDLIM4-202ENST00000379018 DMWDQ09019 674 aa19.45■□□□□ 0.7
PDLIM4-202ENST00000379018 DMP1Q13316 513 aaPredicted RBP19.45■□□□□ 0.7
PDLIM4-202ENST00000379018 GNL2Q13823 731 aaKnown RBP19.45■□□□□ 0.7
PDLIM4-202ENST00000379018 NBR1Q14596 966 aa19.45■□□□□ 0.7
PDLIM4-202ENST00000379018 SEZ6Q53EL9 994 aa19.45■□□□□ 0.7
PDLIM4-202ENST00000379018 PPM1JQ5JR12 505 aa19.45■□□□□ 0.7
PDLIM4-202ENST00000379018 TPGS2Q68CL5 300 aa19.45■□□□□ 0.7
PDLIM4-202ENST00000379018 ALKAL1Q6UXT8 129 aa19.45■□□□□ 0.7
PDLIM4-202ENST00000379018 RNF19BQ6ZMZ0 732 aa19.45■□□□□ 0.7
PDLIM4-202ENST00000379018 CELF5Q8N6W0 485 aaKnown RBP19.45■□□□□ 0.7
PDLIM4-202ENST00000379018 DEPDC1BQ8WUY9 529 aa19.45■□□□□ 0.7
PDLIM4-202ENST00000379018 TBC1D32Q96NH3 1257 aa19.45■□□□□ 0.7
PDLIM4-202ENST00000379018 PGLYRP2Q96PD5 576 aa19.45■□□□□ 0.7
PDLIM4-202ENST00000379018 SLC38A8A6NNN8 435 aa19.44■□□□□ 0.7
PDLIM4-202ENST00000379018 HIP1RO75146 1068 aa19.44■□□□□ 0.7
PDLIM4-202ENST00000379018 MOSPD3O75425 235 aa19.44■□□□□ 0.7
PDLIM4-202ENST00000379018 OR4Q2P0C623 313 aa19.44■□□□□ 0.7
PDLIM4-202ENST00000379018 MARCKSP29966 332 aaPredicted RBP19.44■□□□□ 0.7
PDLIM4-202ENST00000379018 KPNA1P52294 538 aaPredicted RBP19.44■□□□□ 0.7
PDLIM4-202ENST00000379018 XKR4Q5GH76 650 aa19.44■□□□□ 0.7
PDLIM4-202ENST00000379018 TTC38Q5R3I4 469 aa19.44■□□□□ 0.7
PDLIM4-202ENST00000379018 TAS1R3Q7RTX0 852 aa19.44■□□□□ 0.7
PDLIM4-202ENST00000379018 APPL2Q8NEU8 664 aa19.44■□□□□ 0.7
PDLIM4-202ENST00000379018 SNX29Q8TEQ0 813 aa19.44■□□□□ 0.7
PDLIM4-202ENST00000379018 DDX12PQ92771 950 aa19.44■□□□□ 0.7
PDLIM4-202ENST00000379018 C8orf76Q96K31 380 aa19.44■□□□□ 0.7
PDLIM4-202ENST00000379018 ZBTB45Q96K62 511 aaPredicted RBP19.44■□□□□ 0.7
PDLIM4-202ENST00000379018 SUSD3Q96L08 255 aa19.44■□□□□ 0.7
PDLIM4-202ENST00000379018 KMT5AQ9NQR1 393 aa19.44■□□□□ 0.7
PDLIM4-202ENST00000379018 LRWD1Q9UFC0 647 aa19.44■□□□□ 0.7
PDLIM4-202ENST00000379018 TUBGCP4Q9UGJ1 667 aa19.44■□□□□ 0.7
PDLIM4-202ENST00000379018 AFF4Q9UHB7 1163 aaKnown RBP19.44■□□□□ 0.7
PDLIM4-202ENST00000379018 YIPF1Q9Y548 306 aa19.44■□□□□ 0.7
PDLIM4-202ENST00000379018 TIMM13Q9Y5L4 95 aaPredicted RBP19.44■□□□□ 0.7
PDLIM4-202ENST00000379018 SDK1Q7Z5N4 2213 aa19.43■□□□□ 0.7
PDLIM4-202ENST00000379018 MAP1BP46821 2468 aaKnown RBP19.43■□□□□ 0.7
PDLIM4-202ENST00000379018 A0A1W2PRU2 124 aa19.43■□□□□ 0.7
PDLIM4-202ENST00000379018 E9PMD0 336 aa19.43■□□□□ 0.7
PDLIM4-202ENST00000379018 SLC16A4O15374 487 aa19.43■□□□□ 0.7
PDLIM4-202ENST00000379018 RETP07949 1114 aa19.43■□□□□ 0.7
PDLIM4-202ENST00000379018 CHRNB1P11230 501 aa19.43■□□□□ 0.7
PDLIM4-202ENST00000379018 KCNE1P15382 129 aa19.43■□□□□ 0.7
PDLIM4-202ENST00000379018 SPAG1Q07617 926 aa19.43■□□□□ 0.7
PDLIM4-202ENST00000379018 ST3GAL1Q11201 340 aa19.43■□□□□ 0.7
PDLIM4-202ENST00000379018 MRPL58Q14197 206 aaKnown RBP19.43■□□□□ 0.7
PDLIM4-202ENST00000379018 GAS6Q14393 721 aa19.43■□□□□ 0.7
PDLIM4-202ENST00000379018 MPZL3Q6UWV2 235 aa19.43■□□□□ 0.7
PDLIM4-202ENST00000379018 Q6ZS52 159 aa19.43■□□□□ 0.7
PDLIM4-202ENST00000379018 SHKBP1Q8TBC3 707 aa19.43■□□□□ 0.7
PDLIM4-202ENST00000379018 FAM200AQ8TCP9 573 aa19.43■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms