RNA–Protein interactions for RNA: ENST00000378725.3

SSU72-203, Transcript of SSU72 homolog, RNA polymerase II CTD phosphatase, humanhuman

TSL 2

Gene SSU72, Length 619 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72-203ENST00000378725 TRAPPC3O43617 180 aa20.25■□□□□ 0.83
SSU72-203ENST00000378725 LILRB3O75022 631 aa20.25■□□□□ 0.83
SSU72-203ENST00000378725 TMEM191BP0C7N4 346 aa20.25■□□□□ 0.83
SSU72-203ENST00000378725 TNNI1P19237 187 aa20.25■□□□□ 0.83
SSU72-203ENST00000378725 ERCC5P28715 1186 aaPredicted RBP20.25■□□□□ 0.83
SSU72-203ENST00000378725 AARSP49588 968 aaKnown RBP eCLIP20.25■□□□□ 0.83
SSU72-203ENST00000378725 VAMP7P51809 220 aa20.25■□□□□ 0.83
SSU72-203ENST00000378725 AP3M2P53677 418 aa20.25■□□□□ 0.83
SSU72-203ENST00000378725 STX17P56962 302 aa20.25■□□□□ 0.83
SSU72-203ENST00000378725 DSG1Q02413 1049 aa20.25■□□□□ 0.83
SSU72-203ENST00000378725 BMS1Q14692 1282 aaKnown RBP20.25■□□□□ 0.83
SSU72-203ENST00000378725 SKOR2Q2VWA4 1001 aaPredicted RBP20.25■□□□□ 0.83
SSU72-203ENST00000378725 C1orf220Q5T0J3 134 aa20.25■□□□□ 0.83
SSU72-203ENST00000378725 KIAA0319Q5VV43 1072 aa20.25■□□□□ 0.83
SSU72-203ENST00000378725 LMBRD2Q68DH5 695 aaPredicted RBP20.25■□□□□ 0.83
SSU72-203ENST00000378725 MICAL1Q8TDZ2 1067 aa20.25■□□□□ 0.83
SSU72-203ENST00000378725 FAM84AQ96KN4 292 aa20.25■□□□□ 0.83
SSU72-203ENST00000378725 MTMR12Q9C0I1 747 aa20.25■□□□□ 0.83
SSU72-203ENST00000378725 DACH1Q9UI36 760 aa20.25■□□□□ 0.83
SSU72-203ENST00000378725 SIX4Q9UIU6 781 aa20.25■□□□□ 0.83
SSU72-203ENST00000378725 STXBP5LQ9Y2K9 1186 aa20.25■□□□□ 0.83
SSU72-203ENST00000378725 LRRIQ3A6PVS8 624 aaPredicted RBP20.24■□□□□ 0.83
SSU72-203ENST00000378725 CXCL14O95715 111 aa20.24■□□□□ 0.83
SSU72-203ENST00000378725 TNNC2P02585 160 aa20.24■□□□□ 0.83
SSU72-203ENST00000378725 EPB41P11171 864 aaKnown RBP20.24■□□□□ 0.83
SSU72-203ENST00000378725 FGFR3P22607 806 aa20.24■□□□□ 0.83
SSU72-203ENST00000378725 BRCC3P46736 316 aa20.24■□□□□ 0.83
SSU72-203ENST00000378725 LILRA4P59901 499 aa20.24■□□□□ 0.83
SSU72-203ENST00000378725 DLG4P78352 724 aa20.24■□□□□ 0.83
SSU72-203ENST00000378725 SMC1AQ14683 1233 aaKnown RBP20.24■□□□□ 0.83
SSU72-203ENST00000378725 USP41Q3LFD5 358 aa20.24■□□□□ 0.83
SSU72-203ENST00000378725 TIGD5Q53EQ6 642 aa20.24■□□□□ 0.83
SSU72-203ENST00000378725 FAM171A1Q5VUB5 890 aa20.24■□□□□ 0.83
SSU72-203ENST00000378725 SCARA3Q6AZY7 606 aa20.24■□□□□ 0.83
SSU72-203ENST00000378725 SASS6Q6UVJ0 657 aa20.24■□□□□ 0.83
SSU72-203ENST00000378725 TRAPPC11Q7Z392 1133 aa20.24■□□□□ 0.83
SSU72-203ENST00000378725 USP37Q86T82 979 aa20.24■□□□□ 0.83
SSU72-203ENST00000378725 CSGALNACT2Q8N6G5 542 aa20.24■□□□□ 0.83
SSU72-203ENST00000378725 SUSD3Q96L08 255 aa20.24■□□□□ 0.83
SSU72-203ENST00000378725 NSUN3Q9H649 340 aaKnown RBP20.24■□□□□ 0.83
SSU72-203ENST00000378725 ENTPD7Q9NQZ7 604 aa20.24■□□□□ 0.83
SSU72-203ENST00000378725 SSX2IPQ9Y2D8 614 aa20.24■□□□□ 0.83
SSU72-203ENST00000378725 NUB1Q9Y5A7 615 aa20.24■□□□□ 0.83
SSU72-203ENST00000378725 C2orf71A6NGG8 1288 aa20.23■□□□□ 0.83
SSU72-203ENST00000378725 C4BPAP04003 597 aaKnown RBP20.23■□□□□ 0.83
SSU72-203ENST00000378725 ITGB3P05106 788 aa20.23■□□□□ 0.83
SSU72-203ENST00000378725 KRT13P13646 458 aa20.23■□□□□ 0.83
SSU72-203ENST00000378725 RBP5P82980 135 aa20.23■□□□□ 0.83
SSU72-203ENST00000378725 BFSP1Q12934 665 aa20.23■□□□□ 0.83
SSU72-203ENST00000378725 PTPN14Q15678 1187 aa20.23■□□□□ 0.83
SSU72-203ENST00000378725 PLPP4Q5VZY2 271 aa20.23■□□□□ 0.83
SSU72-203ENST00000378725 PDZRN4Q6ZMN7 1036 aaPredicted RBP20.23■□□□□ 0.83
SSU72-203ENST00000378725 TTPALQ9BTX7 342 aa20.23■□□□□ 0.83
SSU72-203ENST00000378725 AGAP1Q9UPQ3 857 aa20.23■□□□□ 0.83
SSU72-203ENST00000378725 PCDHGC5Q9Y5F6 944 aa20.23■□□□□ 0.83
SSU72-203ENST00000378725 HIDE1A8MVS5 230 aa20.22■□□□□ 0.83
SSU72-203ENST00000378725 M0QZQ0 153 aa20.22■□□□□ 0.83
SSU72-203ENST00000378725 SPTLC1O15269 473 aa20.22■□□□□ 0.83
SSU72-203ENST00000378725 LETM1O95202 739 aaPredicted RBP20.22■□□□□ 0.83
SSU72-203ENST00000378725 POLR2BP30876 1174 aaKnown RBP20.22■□□□□ 0.83
SSU72-203ENST00000378725 PNPLA4P41247 253 aa20.22■□□□□ 0.83
SSU72-203ENST00000378725 GLUD2P49448 558 aa20.22■□□□□ 0.83
SSU72-203ENST00000378725 NFKBIBQ15653 356 aa20.22■□□□□ 0.83
SSU72-203ENST00000378725 FRMD5Q7Z6J6 570 aa20.22■□□□□ 0.83
SSU72-203ENST00000378725 LRRC52Q8N7C0 313 aa20.22■□□□□ 0.83
SSU72-203ENST00000378725 SRRTQ9BXP5 876 aaKnown RBP20.22■□□□□ 0.83
SSU72-203ENST00000378725 RXFP1Q9HBX9 757 aa20.22■□□□□ 0.83
SSU72-203ENST00000378725 METTL14Q9HCE5 456 aaKnown RBP20.22■□□□□ 0.83
SSU72-203ENST00000378725 MRPL17Q9NRX2 175 aaKnown RBP20.22■□□□□ 0.83
SSU72-203ENST00000378725 ANO10Q9NW15 660 aa20.22■□□□□ 0.83
SSU72-203ENST00000378725 I3L4J1 428 aa20.21■□□□□ 0.83
SSU72-203ENST00000378725 SYN3O14994 580 aa20.21■□□□□ 0.83
SSU72-203ENST00000378725 CSPG5O95196 566 aa20.21■□□□□ 0.83
SSU72-203ENST00000378725 FGFR1OPO95684 399 aaKnown RBP20.21■□□□□ 0.83
SSU72-203ENST00000378725 CST3P01034 146 aaPredicted RBP20.21■□□□□ 0.83
SSU72-203ENST00000378725 URODP06132 367 aa20.21■□□□□ 0.83
SSU72-203ENST00000378725 TAF6P49848 677 aa20.21■□□□□ 0.83
SSU72-203ENST00000378725 TCEAL5Q5H9L2 206 aa20.21■□□□□ 0.83
SSU72-203ENST00000378725 RTP2Q5QGT7 225 aa20.21■□□□□ 0.83
SSU72-203ENST00000378725 KIAA1841Q6NSI8 718 aa20.21■□□□□ 0.83
SSU72-203ENST00000378725 C15orf39Q6ZRI6 1047 aa20.21■□□□□ 0.83
SSU72-203ENST00000378725 ADGRD2Q7Z7M1 963 aa20.21■□□□□ 0.83
SSU72-203ENST00000378725 AUTS2Q8WXX7 1259 aa20.21■□□□□ 0.83
SSU72-203ENST00000378725 B3GALT6Q96L58 329 aa20.21■□□□□ 0.83
SSU72-203ENST00000378725 ZNF560Q96MR9 790 aa20.21■□□□□ 0.83
SSU72-203ENST00000378725 PCDHB8Q9UN66 801 aa20.21■□□□□ 0.83
SSU72-203ENST00000378725 CDH23Q9H251 3354 aa20.2■□□□□ 0.82
SSU72-203ENST00000378725 GNA14O95837 355 aa20.2■□□□□ 0.82
SSU72-203ENST00000378725 KRT19P08727 400 aa20.2■□□□□ 0.82
SSU72-203ENST00000378725 TKTP29401 623 aaKnown RBP20.2■□□□□ 0.82
SSU72-203ENST00000378725 GTF2H1P32780 548 aa20.2■□□□□ 0.82
SSU72-203ENST00000378725 MARSP56192 900 aaKnown RBP20.2■□□□□ 0.82
SSU72-203ENST00000378725 PPP3CAQ08209 521 aa20.2■□□□□ 0.82
SSU72-203ENST00000378725 MRPL58Q14197 206 aaKnown RBP20.2■□□□□ 0.82
SSU72-203ENST00000378725 ZACNQ401N2 412 aa20.2■□□□□ 0.82
SSU72-203ENST00000378725 TDRD10Q5VZ19 366 aaKnown RBP20.2■□□□□ 0.82
SSU72-203ENST00000378725 SV2AQ7L0J3 742 aa20.2■□□□□ 0.82
SSU72-203ENST00000378725 CEP57Q86XR8 500 aa20.2■□□□□ 0.82
SSU72-203ENST00000378725 LNX1Q8TBB1 728 aaPredicted RBP20.2■□□□□ 0.82
SSU72-203ENST00000378725 RIN2Q8WYP3 895 aaPredicted RBP20.2■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms