RNA–Protein interactions for RNA: ENST00000378526.8

LIG3-202, Transcript of DNA ligase 3, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene LIG3, Length 8,400 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-202ENST00000378526 SPDYE7PQ495Y7 208 aa9.13□□□□□ -0.95
LIG3-202ENST00000378526 PRMT9Q6P2P2 845 aa9.13□□□□□ -0.95
LIG3-202ENST00000378526 IFNEQ86WN2 208 aa9.13□□□□□ -0.95
LIG3-202ENST00000378526 ANKRD13CQ8N6S4 541 aa9.13□□□□□ -0.95
LIG3-202ENST00000378526 PI4KAP1Q8N8J0 262 aa9.13□□□□□ -0.95
LIG3-202ENST00000378526 PRAM1Q96QH2 718 aa9.13□□□□□ -0.95
LIG3-202ENST00000378526 RGS18Q9NS28 235 aa9.13□□□□□ -0.95
LIG3-202ENST00000378526 RPH3AQ9Y2J0 694 aaPredicted RBP9.13□□□□□ -0.95
LIG3-202ENST00000378526 SBNO2Q9Y2G9 1366 aa9.13□□□□□ -0.95
LIG3-202ENST00000378526 CLUP10909 449 aa9.13□□□□□ -0.95
LIG3-202ENST00000378526 TOP3AQ13472 1001 aaPredicted RBP9.13□□□□□ -0.95
LIG3-202ENST00000378526 SLC15A2Q16348 729 aa9.13□□□□□ -0.95
LIG3-202ENST00000378526 TTC6Q86TZ1 520 aa9.13□□□□□ -0.95
LIG3-202ENST00000378526 PIH1D3Q9NQM4 214 aaKnown RBP9.13□□□□□ -0.95
LIG3-202ENST00000378526 RGS17Q9UGC6 210 aaPredicted RBP9.13□□□□□ -0.95
LIG3-202ENST00000378526 A0A1W2PQ72 361 aa9.13□□□□□ -0.95
LIG3-202ENST00000378526 SH3D21A4FU49 640 aa9.13□□□□□ -0.95
LIG3-202ENST00000378526 FYNP06241 537 aa9.13□□□□□ -0.95
LIG3-202ENST00000378526 ZNF23P17027 643 aa9.13□□□□□ -0.95
LIG3-202ENST00000378526 ATP5JP18859 108 aa9.13□□□□□ -0.95
LIG3-202ENST00000378526 GPS1Q13098 491 aa9.13□□□□□ -0.95
LIG3-202ENST00000378526 TFDP2Q14188 446 aa9.13□□□□□ -0.95
LIG3-202ENST00000378526 GSTA3Q16772 222 aa9.13□□□□□ -0.95
LIG3-202ENST00000378526 SHQ1Q6PI26 577 aaKnown RBP9.13□□□□□ -0.95
LIG3-202ENST00000378526 TAB3Q8N5C8 712 aaPredicted RBP9.13□□□□□ -0.95
LIG3-202ENST00000378526 EFHBQ8N7U6 833 aa9.13□□□□□ -0.95
LIG3-202ENST00000378526 GIPC3Q8TF64 312 aa9.13□□□□□ -0.95
LIG3-202ENST00000378526 AIFM2Q9BRQ8 373 aa9.13□□□□□ -0.95
LIG3-202ENST00000378526 EFCAB1Q9HAE3 211 aa9.13□□□□□ -0.95
LIG3-202ENST00000378526 ANKRD6Q9Y2G4 727 aa9.13□□□□□ -0.95
LIG3-202ENST00000378526 PCDHGA10Q9Y5H3 936 aa9.13□□□□□ -0.95
LIG3-202ENST00000378526 V9GY48 417 aaPredicted RBP9.13□□□□□ -0.95
LIG3-202ENST00000378526 ZMYM6O95789 1325 aa9.13□□□□□ -0.95
LIG3-202ENST00000378526 LRRIQ4A6NIV6 560 aa9.13□□□□□ -0.95
LIG3-202ENST00000378526 OR52Z1P0C646 297 aa9.13□□□□□ -0.95
LIG3-202ENST00000378526 MLNP12872 115 aa9.13□□□□□ -0.95
LIG3-202ENST00000378526 RXRAP19793 462 aa9.13□□□□□ -0.95
LIG3-202ENST00000378526 S100GP29377 79 aa9.13□□□□□ -0.95
LIG3-202ENST00000378526 MXD4Q14582 209 aaPredicted RBP9.13□□□□□ -0.95
LIG3-202ENST00000378526 SWI5Q1ZZU3 235 aa9.13□□□□□ -0.95
LIG3-202ENST00000378526 KDM7AQ6ZMT4 941 aa9.13□□□□□ -0.95
LIG3-202ENST00000378526 ZNF280BQ86YH2 543 aa9.13□□□□□ -0.95
LIG3-202ENST00000378526 EZH1Q92800 747 aaPredicted RBP9.13□□□□□ -0.95
LIG3-202ENST00000378526 DSN1Q9H410 356 aa9.13□□□□□ -0.95
LIG3-202ENST00000378526 TMEM206Q9H813 350 aa9.13□□□□□ -0.95
LIG3-202ENST00000378526 PHF11Q9UIL8 331 aa9.13□□□□□ -0.95
LIG3-202ENST00000378526 SYCP2Q9BX26 1530 aa9.13□□□□□ -0.95
LIG3-202ENST00000378526 TRIM64A6NGJ6 449 aa9.13□□□□□ -0.95
LIG3-202ENST00000378526 TRIM64BA6NI03 449 aa9.13□□□□□ -0.95
LIG3-202ENST00000378526 DLATP10515 647 aaKnown RBP9.13□□□□□ -0.95
LIG3-202ENST00000378526 POU5F1BQ06416 359 aa9.13□□□□□ -0.95
LIG3-202ENST00000378526 ITPRIPL1Q6GPH6 555 aa9.13□□□□□ -0.95
LIG3-202ENST00000378526 ADSSL1Q8N142 457 aa9.13□□□□□ -0.95
LIG3-202ENST00000378526 RBM46Q8TBY0 533 aaKnown RBP9.13□□□□□ -0.95
LIG3-202ENST00000378526 OSBPL5Q9H0X9 879 aaPredicted RBP9.13□□□□□ -0.95
LIG3-202ENST00000378526 PCDHA5Q9Y5H7 936 aa9.13□□□□□ -0.95
LIG3-202ENST00000378526 THRAP10827 490 aa9.13□□□□□ -0.95
LIG3-202ENST00000378526 MYL2P10916 166 aa9.13□□□□□ -0.95
LIG3-202ENST00000378526 F8A1P23610 371 aa9.13□□□□□ -0.95
LIG3-202ENST00000378526 TARSP26639 723 aaKnown RBP9.13□□□□□ -0.95
LIG3-202ENST00000378526 AP3S2P59780 193 aa9.13□□□□□ -0.95
LIG3-202ENST00000378526 LPIN2Q92539 896 aa9.13□□□□□ -0.95
LIG3-202ENST00000378526 FAM118BQ9BPY3 351 aa9.13□□□□□ -0.95
LIG3-202ENST00000378526 SNX9Q9Y5X1 595 aa9.13□□□□□ -0.95
LIG3-202ENST00000378526 MYH7P12883 1935 aa9.13□□□□□ -0.95
LIG3-202ENST00000378526 LRRC14Q15048 493 aa9.12□□□□□ -0.95
LIG3-202ENST00000378526 SURF1Q15526 300 aa9.12□□□□□ -0.95
LIG3-202ENST00000378526 TCEAL5Q5H9L2 206 aa9.12□□□□□ -0.95
LIG3-202ENST00000378526 DDI2Q5TDH0 399 aa9.12□□□□□ -0.95
LIG3-202ENST00000378526 CCDC137Q6PK04 289 aaKnown RBP9.12□□□□□ -0.95
LIG3-202ENST00000378526 CRELD2Q6UXH1 353 aaPredicted RBP9.12□□□□□ -0.95
LIG3-202ENST00000378526 KIF2BQ8N4N8 673 aa9.12□□□□□ -0.95
LIG3-202ENST00000378526 PPM1NQ8N819 430 aa9.12□□□□□ -0.95
LIG3-202ENST00000378526 STK33Q9BYT3 514 aa9.12□□□□□ -0.95
LIG3-202ENST00000378526 ZNF180Q9UJW8 692 aa9.12□□□□□ -0.95
LIG3-202ENST00000378526 CCDC189A1A4V9 331 aa9.12□□□□□ -0.95
LIG3-202ENST00000378526 HAT1O14929 419 aa9.12□□□□□ -0.95
LIG3-202ENST00000378526 MTSS1O43312 755 aa9.12□□□□□ -0.95
LIG3-202ENST00000378526 PRMT3O60678 531 aa9.12□□□□□ -0.95
LIG3-202ENST00000378526 TAP1Q03518 808 aa9.12□□□□□ -0.95
LIG3-202ENST00000378526 SLC34A1Q06495 639 aa9.12□□□□□ -0.95
LIG3-202ENST00000378526 PABPC1LQ4VXU2 614 aaKnown RBP9.12□□□□□ -0.95
LIG3-202ENST00000378526 FAM26FQ5R3K3 315 aa9.12□□□□□ -0.95
LIG3-202ENST00000378526 CYP4Z1Q86W10 505 aa9.12□□□□□ -0.95
LIG3-202ENST00000378526 JDP2Q8WYK2 163 aa9.12□□□□□ -0.95
LIG3-202ENST00000378526 DDAH1O94760 285 aa9.12□□□□□ -0.95
LIG3-202ENST00000378526 HMBOX1Q6NT76 420 aa9.12□□□□□ -0.95
LIG3-202ENST00000378526 CLEC4GQ6UXB4 293 aa9.12□□□□□ -0.95
LIG3-202ENST00000378526 RNF19BQ6ZMZ0 732 aa9.12□□□□□ -0.95
LIG3-202ENST00000378526 CYFIP1Q7L576 1253 aa9.12□□□□□ -0.95
LIG3-202ENST00000378526 ZNF589Q86UQ0 364 aaPredicted RBP9.12□□□□□ -0.95
LIG3-202ENST00000378526 TPH2Q8IWU9 490 aa9.12□□□□□ -0.95
LIG3-202ENST00000378526 RDH13Q8NBN7 331 aa9.12□□□□□ -0.95
LIG3-202ENST00000378526 EXD1Q8NHP7 514 aa9.12□□□□□ -0.95
LIG3-202ENST00000378526 MANSC1Q9H8J5 431 aa9.12□□□□□ -0.95
LIG3-202ENST00000378526 AASDHPPTQ9NRN7 309 aa9.12□□□□□ -0.95
LIG3-202ENST00000378526 PCDHA7Q9UN72 937 aa9.12□□□□□ -0.95
LIG3-202ENST00000378526 F8W810 466 aa9.12□□□□□ -0.95
LIG3-202ENST00000378526 PSIP1O75475 530 aaKnown RBP9.12□□□□□ -0.95
LIG3-202ENST00000378526 IFNA14P01570 189 aa9.12□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms