RNA–Protein interactions for RNA: ENST00000378505.6

RPGR-203, Transcript of retinitis pigmentosa GTPase regulator, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene RPGR, Length 4,767 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPGR-203ENST00000378505 GOLGA8RI6L899 631 aa11.89□□□□□ -0.51
RPGR-203ENST00000378505 IL18RAPO95256 599 aa11.89□□□□□ -0.51
RPGR-203ENST00000378505 RBP3P10745 1247 aa11.89□□□□□ -0.51
RPGR-203ENST00000378505 ITGA8P53708 1063 aa11.89□□□□□ -0.51
RPGR-203ENST00000378505 VGLL2Q8N8G2 317 aa11.89□□□□□ -0.51
RPGR-203ENST00000378505 CYFIP2Q96F07 1278 aa11.89□□□□□ -0.51
RPGR-203ENST00000378505 PRMT6Q96LA8 375 aaPredicted RBP11.89□□□□□ -0.51
RPGR-203ENST00000378505 GTSE1Q9NYZ3 720 aa11.89□□□□□ -0.51
RPGR-203ENST00000378505 ZC3H7BQ9UGR2 993 aaKnown RBP11.89□□□□□ -0.51
RPGR-203ENST00000378505 SPAG6O75602 509 aa11.88□□□□□ -0.51
RPGR-203ENST00000378505 IL1R1P14778 569 aa11.88□□□□□ -0.51
RPGR-203ENST00000378505 SESN2P58004 480 aaPredicted RBP11.88□□□□□ -0.51
RPGR-203ENST00000378505 MYBPC2Q14324 1141 aa11.88□□□□□ -0.51
RPGR-203ENST00000378505 PTGISQ16647 500 aa11.88□□□□□ -0.51
RPGR-203ENST00000378505 Q4G0T1 1027 aa11.88□□□□□ -0.51
RPGR-203ENST00000378505 GPAT2Q6NUI2 795 aa11.88□□□□□ -0.51
RPGR-203ENST00000378505 RIBC1Q8N443 379 aaPredicted RBP11.88□□□□□ -0.51
RPGR-203ENST00000378505 KIAA0895Q8NCT3 520 aa11.88□□□□□ -0.51
RPGR-203ENST00000378505 CHST13Q8NET6 341 aa11.88□□□□□ -0.51
RPGR-203ENST00000378505 DEFB129Q9H1M3 183 aa11.88□□□□□ -0.51
RPGR-203ENST00000378505 RSAD1Q9HA92 442 aa11.88□□□□□ -0.51
RPGR-203ENST00000378505 MRPL40Q9NQ50 206 aaKnown RBP11.88□□□□□ -0.51
RPGR-203ENST00000378505 ORC6Q9Y5N6 252 aa11.88□□□□□ -0.51
RPGR-203ENST00000378505 LRRC10BA6NIK2 292 aa11.88□□□□□ -0.51
RPGR-203ENST00000378505 TRIM66O15016 1216 aa11.88□□□□□ -0.51
RPGR-203ENST00000378505 CST8O60676 142 aa11.88□□□□□ -0.51
RPGR-203ENST00000378505 CAP2P40123 477 aa11.88□□□□□ -0.51
RPGR-203ENST00000378505 POLE2P56282 527 aa11.88□□□□□ -0.51
RPGR-203ENST00000378505 MORF4L2Q15014 288 aa11.88□□□□□ -0.51
RPGR-203ENST00000378505 ZNF720Q7Z2F6 126 aa11.88□□□□□ -0.51
RPGR-203ENST00000378505 PIP4K2CQ8TBX8 421 aa11.88□□□□□ -0.51
RPGR-203ENST00000378505 OLFML3Q9NRN5 406 aa11.88□□□□□ -0.51
RPGR-203ENST00000378505 PRMT7Q9NVM4 692 aaPredicted RBP11.88□□□□□ -0.51
RPGR-203ENST00000378505 F5H423 210 aaPredicted RBP11.88□□□□□ -0.51
RPGR-203ENST00000378505 GSTA4O15217 222 aa11.88□□□□□ -0.51
RPGR-203ENST00000378505 RGS7P49802 495 aa11.88□□□□□ -0.51
RPGR-203ENST00000378505 POU5F1BQ06416 359 aa11.88□□□□□ -0.51
RPGR-203ENST00000378505 KIF19Q2TAC6 998 aa11.88□□□□□ -0.51
RPGR-203ENST00000378505 C4orf33Q8N1A6 199 aa11.88□□□□□ -0.51
RPGR-203ENST00000378505 ACTRT1Q8TDG2 376 aa11.88□□□□□ -0.51
RPGR-203ENST00000378505 EPAS1Q99814 870 aa11.88□□□□□ -0.51
RPGR-203ENST00000378505 PACSIN1Q9BY11 444 aa11.88□□□□□ -0.51
RPGR-203ENST00000378505 SIK2Q9H0K1 926 aa11.88□□□□□ -0.51
RPGR-203ENST00000378505 ALG13Q9NP73 1137 aaKnown RBP11.88□□□□□ -0.51
RPGR-203ENST00000378505 MAP3K20Q9NYL2 800 aaKnown RBP11.88□□□□□ -0.51
RPGR-203ENST00000378505 RNF181Q9P0P0 153 aa11.88□□□□□ -0.51
RPGR-203ENST00000378505 LRRIQ3A6PVS8 624 aaPredicted RBP11.88□□□□□ -0.51
RPGR-203ENST00000378505 ARP10275 920 aa11.88□□□□□ -0.51
RPGR-203ENST00000378505 RALAP11233 206 aa11.88□□□□□ -0.51
RPGR-203ENST00000378505 LCP1P13796 627 aa11.88□□□□□ -0.51
RPGR-203ENST00000378505 GTF2H1P32780 548 aa11.88□□□□□ -0.51
RPGR-203ENST00000378505 BIRC2Q13490 618 aa11.88□□□□□ -0.51
RPGR-203ENST00000378505 ATF7IP2Q5U623 682 aa11.88□□□□□ -0.51
RPGR-203ENST00000378505 CBWD2Q8IUF1 395 aa11.88□□□□□ -0.51
RPGR-203ENST00000378505 CCDC138Q96M89 665 aa11.88□□□□□ -0.51
RPGR-203ENST00000378505 NT5C1AQ9BXI3 368 aa11.88□□□□□ -0.51
RPGR-203ENST00000378505 SUDS3Q9H7L9 328 aaPredicted RBP11.88□□□□□ -0.51
RPGR-203ENST00000378505 MYOZ2Q9NPC6 264 aa11.88□□□□□ -0.51
RPGR-203ENST00000378505 PAK5Q9P286 719 aa11.88□□□□□ -0.51
RPGR-203ENST00000378505 CHORDC1Q9UHD1 332 aaPredicted RBP11.88□□□□□ -0.51
RPGR-203ENST00000378505 TMX2Q9Y320 296 aa11.88□□□□□ -0.51
RPGR-203ENST00000378505 A0A0A6YYK5 440 aaPredicted RBP11.87□□□□□ -0.51
RPGR-203ENST00000378505 ZBTB24O43167 697 aaPredicted RBP11.87□□□□□ -0.51
RPGR-203ENST00000378505 WEE2P0C1S8 567 aa11.87□□□□□ -0.51
RPGR-203ENST00000378505 HSD17B4P51659 736 aa11.87□□□□□ -0.51
RPGR-203ENST00000378505 AP2B1P63010 937 aa11.87□□□□□ -0.51
RPGR-203ENST00000378505 PDE1CQ14123 709 aaPredicted RBP11.87□□□□□ -0.51
RPGR-203ENST00000378505 MTHFD1LQ6UB35 978 aa11.87□□□□□ -0.51
RPGR-203ENST00000378505 KDM7AQ6ZMT4 941 aa11.87□□□□□ -0.51
RPGR-203ENST00000378505 TRPM8Q7Z2W7 1104 aa11.87□□□□□ -0.51
RPGR-203ENST00000378505 SH3RF1Q7Z6J0 888 aa11.87□□□□□ -0.51
RPGR-203ENST00000378505 SPATA18Q8TC71 538 aa11.87□□□□□ -0.51
RPGR-203ENST00000378505 FGD4Q96M96 766 aa11.87□□□□□ -0.51
RPGR-203ENST00000378505 KIFC3Q9BVG8 833 aa11.87□□□□□ -0.51
RPGR-203ENST00000378505 A0A087X0B3 334 aa11.87□□□□□ -0.51
RPGR-203ENST00000378505 TTC36A6NLP5 189 aa11.87□□□□□ -0.51
RPGR-203ENST00000378505 ZNF200P98182 395 aaPredicted RBP11.87□□□□□ -0.51
RPGR-203ENST00000378505 YWHAHQ04917 246 aaPredicted RBP11.87□□□□□ -0.51
RPGR-203ENST00000378505 ZNF571Q7Z3V5 609 aaPredicted RBP11.87□□□□□ -0.51
RPGR-203ENST00000378505 SAMD3Q8N6K7 520 aa11.87□□□□□ -0.51
RPGR-203ENST00000378505 GMCL1P1Q8NEA9 526 aa11.87□□□□□ -0.51
RPGR-203ENST00000378505 DUSP9Q99956 384 aaKnown RBP11.87□□□□□ -0.51
RPGR-203ENST00000378505 CBWD1Q9BRT8 395 aa11.87□□□□□ -0.51
RPGR-203ENST00000378505 ADAM33Q9BZ11 813 aa11.87□□□□□ -0.51
RPGR-203ENST00000378505 RANBP17Q9H2T7 1088 aaKnown RBP11.87□□□□□ -0.51
RPGR-203ENST00000378505 XPO7Q9UIA9 1087 aaKnown RBP11.87□□□□□ -0.51
RPGR-203ENST00000378505 MST1RQ04912 1400 aa11.87□□□□□ -0.51
RPGR-203ENST00000378505 BCL9O00512 1426 aa11.87□□□□□ -0.51
RPGR-203ENST00000378505 HBP1O60381 514 aa11.87□□□□□ -0.51
RPGR-203ENST00000378505 ZC3H11AO75152 810 aaKnown RBP eCLIP11.87□□□□□ -0.51
RPGR-203ENST00000378505 SLC25A27O95847 323 aa11.87□□□□□ -0.51
RPGR-203ENST00000378505 RPS12P25398 132 aaKnown RBP11.87□□□□□ -0.51
RPGR-203ENST00000378505 SERPINB9P50453 376 aa11.87□□□□□ -0.51
RPGR-203ENST00000378505 RAD23BP54727 409 aa11.87□□□□□ -0.51
RPGR-203ENST00000378505 PRAMEP78395 509 aa11.87□□□□□ -0.51
RPGR-203ENST00000378505 IL1RL1Q01638 556 aa11.87□□□□□ -0.51
RPGR-203ENST00000378505 MKRN4PQ13434 485 aaPredicted RBP11.87□□□□□ -0.51
RPGR-203ENST00000378505 TMTC4Q5T4D3 741 aa11.87□□□□□ -0.51
RPGR-203ENST00000378505 ANGEL2Q5VTE6 544 aaKnown RBP11.87□□□□□ -0.51
RPGR-203ENST00000378505 C3orf62Q6ZUJ4 267 aa11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms