RNA–Protein interactions for RNA: ENST00000378125.4

PCDHA4-201, Transcript of protocadherin alpha 4, humanhuman

TSL 5 BASIC

Gene PCDHA4, Length 2,328 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA4-201ENST00000378125 GUCY1A3Q02108 690 aa20.52■□□□□ 0.88
PCDHA4-201ENST00000378125 CENPCQ03188 943 aa20.52■□□□□ 0.88
PCDHA4-201ENST00000378125 MKRN3Q13064 507 aaKnown RBP20.52■□□□□ 0.88
PCDHA4-201ENST00000378125 SIX1Q15475 284 aaPredicted RBP20.52■□□□□ 0.88
PCDHA4-201ENST00000378125 PPP2R5EQ16537 467 aa20.52■□□□□ 0.88
PCDHA4-201ENST00000378125 MAPK6Q16659 721 aa20.52■□□□□ 0.88
PCDHA4-201ENST00000378125 ZNF677Q86XU0 584 aa20.52■□□□□ 0.88
PCDHA4-201ENST00000378125 BRSK2Q8IWQ3 736 aa20.52■□□□□ 0.88
PCDHA4-201ENST00000378125 ABRAQ8N0Z2 381 aa20.52■□□□□ 0.88
PCDHA4-201ENST00000378125 ATG4AQ8WYN0 398 aa20.52■□□□□ 0.88
PCDHA4-201ENST00000378125 FAM167AQ96KS9 214 aa20.52■□□□□ 0.88
PCDHA4-201ENST00000378125 HERPUD2Q9BSE4 406 aa20.52■□□□□ 0.88
PCDHA4-201ENST00000378125 INO80BQ9C086 356 aaPredicted RBP20.52■□□□□ 0.88
PCDHA4-201ENST00000378125 TMBIM4Q9HC24 238 aa20.52■□□□□ 0.88
PCDHA4-201ENST00000378125 RASAL2Q9UJF2 1139 aa20.52■□□□□ 0.88
PCDHA4-201ENST00000378125 FAM187AA6NFU0 413 aa20.52■□□□□ 0.87
PCDHA4-201ENST00000378125 MYZAPP0CAP1 466 aa20.52■□□□□ 0.87
PCDHA4-201ENST00000378125 YBX3P16989 372 aaKnown RBP eCLIP20.52■□□□□ 0.87
PCDHA4-201ENST00000378125 COILP38432 576 aaPredicted RBP20.52■□□□□ 0.87
PCDHA4-201ENST00000378125 NOMO3P69849 1222 aa20.52■□□□□ 0.87
PCDHA4-201ENST00000378125 CLUL1Q15846 466 aa20.52■□□□□ 0.87
PCDHA4-201ENST00000378125 ZPBP2Q6X784 338 aa20.52■□□□□ 0.87
PCDHA4-201ENST00000378125 ZBTB8OSQ8IWT0 167 aa20.52■□□□□ 0.87
PCDHA4-201ENST00000378125 MPHOSPH6Q99547 160 aaKnown RBP20.52■□□□□ 0.87
PCDHA4-201ENST00000378125 FAM118BQ9BPY3 351 aa20.52■□□□□ 0.87
PCDHA4-201ENST00000378125 HEMGNQ9BXL5 484 aa20.52■□□□□ 0.87
PCDHA4-201ENST00000378125 IMPG2Q9BZV3 1241 aa20.52■□□□□ 0.87
PCDHA4-201ENST00000378125 MTUS1Q9ULD2 1270 aa20.52■□□□□ 0.87
PCDHA4-201ENST00000378125 LRRC37A2A6NM11 1700 aa20.51■□□□□ 0.87
PCDHA4-201ENST00000378125 WEE2P0C1S8 567 aa20.51■□□□□ 0.87
PCDHA4-201ENST00000378125 NR1D1P20393 614 aa20.51■□□□□ 0.87
PCDHA4-201ENST00000378125 EFNA5P52803 228 aa20.51■□□□□ 0.87
PCDHA4-201ENST00000378125 UBAP2Q5T6F2 1119 aaKnown RBP20.51■□□□□ 0.87
PCDHA4-201ENST00000378125 ZDHHC24Q6UX98 284 aa20.51■□□□□ 0.87
PCDHA4-201ENST00000378125 RNPEPQ9H4A4 650 aa20.51■□□□□ 0.87
PCDHA4-201ENST00000378125 KCNH4Q9UQ05 1017 aa20.51■□□□□ 0.87
PCDHA4-201ENST00000378125 GRIN2DO15399 1336 aa20.51■□□□□ 0.87
PCDHA4-201ENST00000378125 OSBPP22059 807 aa20.5■□□□□ 0.87
PCDHA4-201ENST00000378125 GJA5P36382 358 aa20.5■□□□□ 0.87
PCDHA4-201ENST00000378125 PPIL2Q13356 520 aa20.5■□□□□ 0.87
PCDHA4-201ENST00000378125 GPAT2Q6NUI2 795 aa20.5■□□□□ 0.87
PCDHA4-201ENST00000378125 EFCAB12Q6NXP0 572 aa20.5■□□□□ 0.87
PCDHA4-201ENST00000378125 CCDC50Q8IVM0 306 aa20.5■□□□□ 0.87
PCDHA4-201ENST00000378125 TMEM192Q8IY95 271 aa20.5■□□□□ 0.87
PCDHA4-201ENST00000378125 UHMK1Q8TAS1 419 aaKnown RBP20.5■□□□□ 0.87
PCDHA4-201ENST00000378125 MINDY3Q9H8M7 445 aa20.5■□□□□ 0.87
PCDHA4-201ENST00000378125 GRHL1Q9NZI5 618 aa20.5■□□□□ 0.87
PCDHA4-201ENST00000378125 CWC15Q9P013 229 aaKnown RBP20.5■□□□□ 0.87
PCDHA4-201ENST00000378125 DNAJC25-GNG10A0A024R161 153 aa20.5■□□□□ 0.87
PCDHA4-201ENST00000378125 RPS6KA5O75582 802 aa20.5■□□□□ 0.87
PCDHA4-201ENST00000378125 HSPA6P17066 643 aa20.5■□□□□ 0.87
PCDHA4-201ENST00000378125 MXD4Q14582 209 aaPredicted RBP20.5■□□□□ 0.87
PCDHA4-201ENST00000378125 EEF1DP3Q658K8 133 aa20.5■□□□□ 0.87
PCDHA4-201ENST00000378125 TCP11Q8WWU5 503 aa20.5■□□□□ 0.87
PCDHA4-201ENST00000378125 ZNF606Q8WXB4 792 aa20.5■□□□□ 0.87
PCDHA4-201ENST00000378125 ZNF408Q9H9D4 720 aa20.5■□□□□ 0.87
PCDHA4-201ENST00000378125 SPON1Q9HCB6 807 aa20.5■□□□□ 0.87
PCDHA4-201ENST00000378125 PCYOX1Q9UHG3 505 aa20.5■□□□□ 0.87
PCDHA4-201ENST00000378125 ANKRD65E5RJM6 399 aa20.49■□□□□ 0.87
PCDHA4-201ENST00000378125 OGTO15294 1046 aa20.49■□□□□ 0.87
PCDHA4-201ENST00000378125 LGR5O75473 907 aa20.49■□□□□ 0.87
PCDHA4-201ENST00000378125 IVLP07476 585 aa20.49■□□□□ 0.87
PCDHA4-201ENST00000378125 TBXAS1P24557 533 aaPredicted RBP20.49■□□□□ 0.87
PCDHA4-201ENST00000378125 BRD2P25440 801 aaKnown RBP20.49■□□□□ 0.87
PCDHA4-201ENST00000378125 SGO2Q562F6 1265 aa20.49■□□□□ 0.87
PCDHA4-201ENST00000378125 CDCA2Q69YH5 1023 aaPredicted RBP20.49■□□□□ 0.87
PCDHA4-201ENST00000378125 CCDC62Q6P9F0 684 aa20.49■□□□□ 0.87
PCDHA4-201ENST00000378125 LRIG3Q6UXM1 1119 aa20.49■□□□□ 0.87
PCDHA4-201ENST00000378125 AVENQ9NQS1 362 aaPredicted RBP20.49■□□□□ 0.87
PCDHA4-201ENST00000378125 CHST7Q9NS84 486 aa20.49■□□□□ 0.87
PCDHA4-201ENST00000378125 KLHL11Q9NVR0 708 aa20.49■□□□□ 0.87
PCDHA4-201ENST00000378125 SHBGP04278 402 aa20.49■□□□□ 0.87
PCDHA4-201ENST00000378125 TAS2R40P59535 323 aa20.49■□□□□ 0.87
PCDHA4-201ENST00000378125 IFFO1Q0D2I5 559 aa20.49■□□□□ 0.87
PCDHA4-201ENST00000378125 MAMLD1Q13495 774 aa20.49■□□□□ 0.87
PCDHA4-201ENST00000378125 MTMR3Q13615 1198 aa20.49■□□□□ 0.87
PCDHA4-201ENST00000378125 TRIP13Q15645 432 aaPredicted RBP20.49■□□□□ 0.87
PCDHA4-201ENST00000378125 ZNF568Q3ZCX4 644 aa20.49■□□□□ 0.87
PCDHA4-201ENST00000378125 LIN9Q5TKA1 542 aa20.49■□□□□ 0.87
PCDHA4-201ENST00000378125 WDR49Q8IV35 697 aa20.49■□□□□ 0.87
PCDHA4-201ENST00000378125 KCNN1Q92952 543 aa20.49■□□□□ 0.87
PCDHA4-201ENST00000378125 SLTMQ9NWH9 1034 aaKnown RBP eCLIP20.49■□□□□ 0.87
PCDHA4-201ENST00000378125 LCMT1Q9UIC8 334 aa20.49■□□□□ 0.87
PCDHA4-201ENST00000378125 DCDC2CA8MYV0 355 aa20.48■□□□□ 0.87
PCDHA4-201ENST00000378125 ABLIM1O14639 778 aa20.48■□□□□ 0.87
PCDHA4-201ENST00000378125 ECM2O94769 699 aaPredicted RBP20.48■□□□□ 0.87
PCDHA4-201ENST00000378125 ASS1P00966 412 aaKnown RBP20.48■□□□□ 0.87
PCDHA4-201ENST00000378125 IQCF3P0C7M6 154 aa20.48■□□□□ 0.87
PCDHA4-201ENST00000378125 MYBL1P10243 752 aa20.48■□□□□ 0.87
PCDHA4-201ENST00000378125 EPHX2P34913 555 aa20.48■□□□□ 0.87
PCDHA4-201ENST00000378125 SKOR1P84550 965 aa20.48■□□□□ 0.87
PCDHA4-201ENST00000378125 TRPC3Q13507 836 aa20.48■□□□□ 0.87
PCDHA4-201ENST00000378125 PPP1R7Q15435 360 aa20.48■□□□□ 0.87
PCDHA4-201ENST00000378125 ATF7IP2Q5U623 682 aa20.48■□□□□ 0.87
PCDHA4-201ENST00000378125 PLPPR4Q7Z2D5 763 aa20.48■□□□□ 0.87
PCDHA4-201ENST00000378125 BCAS4Q8TDM0 211 aa20.48■□□□□ 0.87
PCDHA4-201ENST00000378125 CPSF3Q9UKF6 684 aaKnown RBP20.48■□□□□ 0.87
PCDHA4-201ENST00000378125 IGKV6-21A0A0C4DH24 114 aa20.48■□□□□ 0.87
PCDHA4-201ENST00000378125 EIF3HO15372 352 aaKnown RBP eCLIP20.48■□□□□ 0.87
PCDHA4-201ENST00000378125 TLR3O15455 904 aaKnown RBP20.48■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms