RNA–Protein interactions for RNA: ENST00000378026.4

CKAP4-201, Transcript of cytoskeleton associated protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CKAP4, Length 3,093 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP4-201ENST00000378026 PDCD7Q8N8D1 485 aaKnown RBP16.82■□□□□ 0.28
CKAP4-201ENST00000378026 FIZ1Q96SL8 496 aa16.82■□□□□ 0.28
CKAP4-201ENST00000378026 MAK16Q9BXY0 300 aaKnown RBP16.82■□□□□ 0.28
CKAP4-201ENST00000378026 DMAC2Q9NW81 257 aa16.82■□□□□ 0.28
CKAP4-201ENST00000378026 EURLQ9NYK6 297 aa16.82■□□□□ 0.28
CKAP4-201ENST00000378026 ACTL7BQ9Y614 415 aa16.82■□□□□ 0.28
CKAP4-201ENST00000378026 K7ENM7 598 aa16.82■□□□□ 0.28
CKAP4-201ENST00000378026 UFL1O94874 794 aa16.82■□□□□ 0.28
CKAP4-201ENST00000378026 HAUS5O94927 633 aa16.82■□□□□ 0.28
CKAP4-201ENST00000378026 TJP3O95049 919 aa16.82■□□□□ 0.28
CKAP4-201ENST00000378026 PSMG1O95456 288 aa16.82■□□□□ 0.28
CKAP4-201ENST00000378026 CYP1A2P05177 515 aa16.82■□□□□ 0.28
CKAP4-201ENST00000378026 SSTR3P32745 418 aaPredicted RBP16.82■□□□□ 0.28
CKAP4-201ENST00000378026 SLC34A1Q06495 639 aa16.82■□□□□ 0.28
CKAP4-201ENST00000378026 TPTE2Q6XPS3 522 aa16.82■□□□□ 0.28
CKAP4-201ENST00000378026 ANKMY2Q8IV38 441 aa16.82■□□□□ 0.28
CKAP4-201ENST00000378026 KBTBD2Q8IY47 623 aa16.82■□□□□ 0.28
CKAP4-201ENST00000378026 BTBD10Q9BSF8 475 aa16.82■□□□□ 0.28
CKAP4-201ENST00000378026 TMEM117Q9H0C3 514 aa16.82■□□□□ 0.28
CKAP4-201ENST00000378026 GTF3C4Q9UKN8 822 aa16.82■□□□□ 0.28
CKAP4-201ENST00000378026 NEU2Q9Y3R4 380 aa16.82■□□□□ 0.28
CKAP4-201ENST00000378026 CCDC22O60826 627 aa16.81■□□□□ 0.28
CKAP4-201ENST00000378026 EEF2P13639 858 aaKnown RBP16.81■□□□□ 0.28
CKAP4-201ENST00000378026 ETS2P15036 469 aa16.81■□□□□ 0.28
CKAP4-201ENST00000378026 CD58P19256 250 aa16.81■□□□□ 0.28
CKAP4-201ENST00000378026 CAV1Q03135 178 aa16.81■□□□□ 0.28
CKAP4-201ENST00000378026 DDB1Q16531 1140 aa16.81■□□□□ 0.28
CKAP4-201ENST00000378026 SLC45A4Q5BKX6 768 aa16.81■□□□□ 0.28
CKAP4-201ENST00000378026 RINLQ6ZS11 566 aa16.81■□□□□ 0.28
CKAP4-201ENST00000378026 ARHGAP22Q7Z5H3 698 aa16.81■□□□□ 0.28
CKAP4-201ENST00000378026 SLCO2A1Q92959 643 aa16.81■□□□□ 0.28
CKAP4-201ENST00000378026 FAM84AQ96KN4 292 aa16.81■□□□□ 0.28
CKAP4-201ENST00000378026 CFAP57Q96MR6 1250 aa16.81■□□□□ 0.28
CKAP4-201ENST00000378026 SERPINB13Q9UIV8 391 aa16.81■□□□□ 0.28
CKAP4-201ENST00000378026 KRT5P13647 590 aa16.81■□□□□ 0.28
CKAP4-201ENST00000378026 CYP11B1P15538 503 aa16.81■□□□□ 0.28
CKAP4-201ENST00000378026 SERPINB3P29508 390 aa16.81■□□□□ 0.28
CKAP4-201ENST00000378026 GSTT1P30711 240 aa16.81■□□□□ 0.28
CKAP4-201ENST00000378026 USP4Q13107 963 aa16.81■□□□□ 0.28
CKAP4-201ENST00000378026 CTC1Q2NKJ3 1217 aa16.81■□□□□ 0.28
CKAP4-201ENST00000378026 ZBED8Q8IZ13 594 aa16.81■□□□□ 0.28
CKAP4-201ENST00000378026 ZFAND2BQ8WV99 257 aa16.81■□□□□ 0.28
CKAP4-201ENST00000378026 MBOAT7Q96N66 472 aa16.81■□□□□ 0.28
CKAP4-201ENST00000378026 FHDC1Q9C0D6 1143 aaPredicted RBP16.81■□□□□ 0.28
CKAP4-201ENST00000378026 ARMCX1Q9P291 453 aa16.81■□□□□ 0.28
CKAP4-201ENST00000378026 MAP3K7O43318 606 aa16.81■□□□□ 0.28
CKAP4-201ENST00000378026 TROVE2P10155 538 aaKnown RBP eCLIP16.81■□□□□ 0.28
CKAP4-201ENST00000378026 GZMAP12544 262 aa16.81■□□□□ 0.28
CKAP4-201ENST00000378026 RBM5P52756 815 aaKnown RBP eCLIP16.81■□□□□ 0.28
CKAP4-201ENST00000378026 TBC1D25Q3MII6 688 aa16.81■□□□□ 0.28
CKAP4-201ENST00000378026 MDH1BQ5I0G3 518 aa16.81■□□□□ 0.28
CKAP4-201ENST00000378026 LRRC6Q86X45 466 aa16.81■□□□□ 0.28
CKAP4-201ENST00000378026 CCDC89Q8N998 374 aa16.81■□□□□ 0.28
CKAP4-201ENST00000378026 CPA5Q8WXQ8 436 aa16.81■□□□□ 0.28
CKAP4-201ENST00000378026 CYTH2Q99418 400 aa16.81■□□□□ 0.28
CKAP4-201ENST00000378026 UBE2OQ9C0C9 1292 aaKnown RBP16.81■□□□□ 0.28
CKAP4-201ENST00000378026 KANSL3Q9P2N6 904 aa16.81■□□□□ 0.28
CKAP4-201ENST00000378026 WRAP73Q9P2S5 460 aaPredicted RBP16.81■□□□□ 0.28
CKAP4-201ENST00000378026 PI4K2BG5E9Z4 385 aa16.8■□□□□ 0.28
CKAP4-201ENST00000378026 DDX39AO00148 427 aaKnown RBP16.8■□□□□ 0.28
CKAP4-201ENST00000378026 C2CD2LO14523 706 aa16.8■□□□□ 0.28
CKAP4-201ENST00000378026 MTA2O94776 668 aa16.8■□□□□ 0.28
CKAP4-201ENST00000378026 MXI1P50539 228 aa16.8■□□□□ 0.28
CKAP4-201ENST00000378026 EFTUD2Q15029 972 aaKnown RBP eCLIP16.8■□□□□ 0.28
CKAP4-201ENST00000378026 CMPK2Q5EBM0 449 aa16.8■□□□□ 0.28
CKAP4-201ENST00000378026 SAMD1Q6SPF0 538 aaPredicted RBP16.8■□□□□ 0.28
CKAP4-201ENST00000378026 TTC7BQ86TV6 843 aa16.8■□□□□ 0.28
CKAP4-201ENST00000378026 DRAXINQ8NBI3 349 aaPredicted RBP16.8■□□□□ 0.28
CKAP4-201ENST00000378026 PLEKHO2Q8TD55 490 aa16.8■□□□□ 0.28
CKAP4-201ENST00000378026 MAIP1Q8WWC4 291 aa16.8■□□□□ 0.28
CKAP4-201ENST00000378026 HAUS1Q96CS2 278 aa16.8■□□□□ 0.28
CKAP4-201ENST00000378026 IFT43Q96FT9 208 aa16.8■□□□□ 0.28
CKAP4-201ENST00000378026 FAM20AQ96MK3 541 aa16.8■□□□□ 0.28
CKAP4-201ENST00000378026 NYXQ9GZU5 481 aa16.8■□□□□ 0.28
CKAP4-201ENST00000378026 OCEL1Q9H607 264 aa16.8■□□□□ 0.28
CKAP4-201ENST00000378026 PKD2L1Q9P0L9 805 aa16.8■□□□□ 0.28
CKAP4-201ENST00000378026 IGKV6D-41A0A0C4DH26 115 aa16.8■□□□□ 0.28
CKAP4-201ENST00000378026 MAGEA13PA6NCF6 341 aa16.8■□□□□ 0.28
CKAP4-201ENST00000378026 MUTP22033 750 aa16.8■□□□□ 0.28
CKAP4-201ENST00000378026 AMPD1P23109 780 aa16.8■□□□□ 0.28
CKAP4-201ENST00000378026 Q4G0T1 1027 aa16.8■□□□□ 0.28
CKAP4-201ENST00000378026 STXBP4Q6ZWJ1 553 aa16.8■□□□□ 0.28
CKAP4-201ENST00000378026 POLR3CQ9BUI4 534 aaPredicted RBP16.8■□□□□ 0.28
CKAP4-201ENST00000378026 UVRAGQ9P2Y5 699 aa16.8■□□□□ 0.28
CKAP4-201ENST00000378026 DAGLAQ9Y4D2 1042 aa16.8■□□□□ 0.28
CKAP4-201ENST00000378026 TRAFD1O14545 582 aaPredicted RBP16.79■□□□□ 0.28
CKAP4-201ENST00000378026 BAG2O95816 211 aa16.79■□□□□ 0.28
CKAP4-201ENST00000378026 POTEJP0CG39 1038 aa16.79■□□□□ 0.28
CKAP4-201ENST00000378026 GABPAQ06546 454 aa16.79■□□□□ 0.28
CKAP4-201ENST00000378026 NR1H3Q13133 447 aa16.79■□□□□ 0.28
CKAP4-201ENST00000378026 PPP2R5CQ13362 524 aa16.79■□□□□ 0.28
CKAP4-201ENST00000378026 ZRSR2Q15696 482 aaKnown RBP16.79■□□□□ 0.28
CKAP4-201ENST00000378026 ZNF526Q8TF50 670 aaPredicted RBP16.79■□□□□ 0.28
CKAP4-201ENST00000378026 SEMA4DQ92854 862 aa16.79■□□□□ 0.28
CKAP4-201ENST00000378026 SEC23IPQ9Y6Y8 1000 aaKnown RBP16.79■□□□□ 0.28
CKAP4-201ENST00000378026 MAST2Q6P0Q8 1798 aa16.79■□□□□ 0.28
CKAP4-201ENST00000378026 ECE2O60344 883 aa16.79■□□□□ 0.28
CKAP4-201ENST00000378026 ESRRAP11474 423 aaPredicted RBP16.79■□□□□ 0.28
CKAP4-201ENST00000378026 KRT10P13645 584 aa16.79■□□□□ 0.28
CKAP4-201ENST00000378026 GPSM2P81274 684 aa16.79■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms