RNA–Protein interactions for RNA: ENST00000377575.2

HMGN4-201, Transcript of high mobility group nucleosomal binding domain 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGN4, Length 1,225 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN4-201ENST00000377575 CASP5P51878 434 aa18.27■□□□□ 0.52
HMGN4-201ENST00000377575 ASIC1P78348 528 aa18.27■□□□□ 0.52
HMGN4-201ENST00000377575 KRT85P78386 507 aa18.27■□□□□ 0.52
HMGN4-201ENST00000377575 ZXDAP98168 799 aa18.27■□□□□ 0.52
HMGN4-201ENST00000377575 BECN1Q14457 450 aa18.27■□□□□ 0.52
HMGN4-201ENST00000377575 TMEM132DQ14C87 1099 aa18.27■□□□□ 0.52
HMGN4-201ENST00000377575 ZBTB6Q15916 424 aa18.27■□□□□ 0.52
HMGN4-201ENST00000377575 PPM1LQ5SGD2 360 aa18.27■□□□□ 0.52
HMGN4-201ENST00000377575 RESP18Q5W5W9 173 aa18.27■□□□□ 0.52
HMGN4-201ENST00000377575 APPL2Q8NEU8 664 aa18.27■□□□□ 0.52
HMGN4-201ENST00000377575 FEZF2Q8TBJ5 459 aa18.27■□□□□ 0.52
HMGN4-201ENST00000377575 ZNF707Q96C28 371 aaPredicted RBP18.27■□□□□ 0.52
HMGN4-201ENST00000377575 PRKD2Q9BZL6 878 aa18.27■□□□□ 0.52
HMGN4-201ENST00000377575 ASB7Q9H672 318 aa18.27■□□□□ 0.52
HMGN4-201ENST00000377575 TMEM206Q9H813 350 aa18.27■□□□□ 0.52
HMGN4-201ENST00000377575 WDR6Q9NNW5 1121 aaKnown RBP18.27■□□□□ 0.52
HMGN4-201ENST00000377575 ATP6V1DQ9Y5K8 247 aa18.27■□□□□ 0.52
HMGN4-201ENST00000377575 TSC2P49815 1807 aa18.27■□□□□ 0.52
HMGN4-201ENST00000377575 MYO10Q9HD67 2058 aa18.26■□□□□ 0.51
HMGN4-201ENST00000377575 C8AP07357 584 aa18.26■□□□□ 0.51
HMGN4-201ENST00000377575 HOXA9P31269 272 aa18.26■□□□□ 0.51
HMGN4-201ENST00000377575 KCNA1Q09470 495 aa18.26■□□□□ 0.51
HMGN4-201ENST00000377575 JADE1Q6IE81 842 aa18.26■□□□□ 0.51
HMGN4-201ENST00000377575 ZNF280DQ6N043 979 aa18.26■□□□□ 0.51
HMGN4-201ENST00000377575 CNNM4Q6P4Q7 775 aa18.26■□□□□ 0.51
HMGN4-201ENST00000377575 RTL10Q7L3V2 364 aa18.26■□□□□ 0.51
HMGN4-201ENST00000377575 RCOR1Q9UKL0 485 aa18.26■□□□□ 0.51
HMGN4-201ENST00000377575 PCDHB8Q9UN66 801 aa18.26■□□□□ 0.51
HMGN4-201ENST00000377575 HCN4Q9Y3Q4 1203 aa18.26■□□□□ 0.51
HMGN4-201ENST00000377575 C2CD2Q9Y426 696 aa18.26■□□□□ 0.51
HMGN4-201ENST00000377575 DOCK8Q8NF50 2099 aa18.26■□□□□ 0.51
HMGN4-201ENST00000377575 TECTAO75443 2155 aa18.25■□□□□ 0.51
HMGN4-201ENST00000377575 XYLBO75191 536 aa18.25■□□□□ 0.51
HMGN4-201ENST00000377575 IL18RAPO95256 599 aa18.25■□□□□ 0.51
HMGN4-201ENST00000377575 LDHAP00338 332 aaKnown RBP18.25■□□□□ 0.51
HMGN4-201ENST00000377575 NFICP08651 508 aa18.25■□□□□ 0.51
HMGN4-201ENST00000377575 GARTP22102 1010 aa18.25■□□□□ 0.51
HMGN4-201ENST00000377575 PAX3P23760 479 aa18.25■□□□□ 0.51
HMGN4-201ENST00000377575 ADSSP30520 456 aa18.25■□□□□ 0.51
HMGN4-201ENST00000377575 MTMR3Q13615 1198 aa18.25■□□□□ 0.51
HMGN4-201ENST00000377575 UVSSAQ2YD98 709 aa18.25■□□□□ 0.51
HMGN4-201ENST00000377575 SPATA1Q5VX52 437 aa18.25■□□□□ 0.51
HMGN4-201ENST00000377575 SLC8B1Q6J4K2 584 aa18.25■□□□□ 0.51
HMGN4-201ENST00000377575 SLC7A14Q8TBB6 771 aa18.25■□□□□ 0.51
HMGN4-201ENST00000377575 C7orf25Q9BPX7 421 aa18.25■□□□□ 0.51
HMGN4-201ENST00000377575 FGFBP2Q9BYJ0 223 aa18.25■□□□□ 0.51
HMGN4-201ENST00000377575 IKZF4Q9H2S9 585 aa18.25■□□□□ 0.51
HMGN4-201ENST00000377575 SORCS3Q9UPU3 1222 aa18.25■□□□□ 0.51
HMGN4-201ENST00000377575 M0QZQ0 153 aa18.24■□□□□ 0.51
HMGN4-201ENST00000377575 EIF3DO15371 548 aaKnown RBP eCLIP18.24■□□□□ 0.51
HMGN4-201ENST00000377575 POU2F2P09086 479 aa18.24■□□□□ 0.51
HMGN4-201ENST00000377575 AARSP49588 968 aaKnown RBP eCLIP18.24■□□□□ 0.51
HMGN4-201ENST00000377575 ROR1Q01973 937 aa18.24■□□□□ 0.51
HMGN4-201ENST00000377575 SIGLEC14Q08ET2 396 aa18.24■□□□□ 0.51
HMGN4-201ENST00000377575 CTXN3Q4LDR2 81 aa18.24■□□□□ 0.51
HMGN4-201ENST00000377575 RSPO2Q6UXX9 243 aaPredicted RBP18.24■□□□□ 0.51
HMGN4-201ENST00000377575 TRIM67Q6ZTA4 783 aa18.24■□□□□ 0.51
HMGN4-201ENST00000377575 NT5DC4Q86YG4 428 aa18.24■□□□□ 0.51
HMGN4-201ENST00000377575 UBALD2Q8IYN6 164 aa18.24■□□□□ 0.51
HMGN4-201ENST00000377575 CEP57L1Q8IYX8 460 aa18.24■□□□□ 0.51
HMGN4-201ENST00000377575 SPATA32Q96LK8 384 aa18.24■□□□□ 0.51
HMGN4-201ENST00000377575 KCNH3Q9ULD8 1083 aa18.24■□□□□ 0.51
HMGN4-201ENST00000377575 UBE4BO95155 1302 aa18.23■□□□□ 0.51
HMGN4-201ENST00000377575 SCN1AP35498 2009 aa18.23■□□□□ 0.51
HMGN4-201ENST00000377575 ARHGEF37A1IGU5 675 aa18.23■□□□□ 0.51
HMGN4-201ENST00000377575 KIAA0391O15091 583 aaKnown RBP18.23■□□□□ 0.51
HMGN4-201ENST00000377575 PRPF6O94906 941 aaKnown RBP18.23■□□□□ 0.51
HMGN4-201ENST00000377575 GBP2P32456 591 aaPredicted RBP18.23■□□□□ 0.51
HMGN4-201ENST00000377575 GUCY2FP51841 1108 aa18.23■□□□□ 0.51
HMGN4-201ENST00000377575 YWHAHQ04917 246 aaPredicted RBP18.23■□□□□ 0.51
HMGN4-201ENST00000377575 MRPL58Q14197 206 aaKnown RBP18.23■□□□□ 0.51
HMGN4-201ENST00000377575 FAM26FQ5R3K3 315 aa18.23■□□□□ 0.51
HMGN4-201ENST00000377575 ARMCX5Q6P1M9 558 aa18.23■□□□□ 0.51
HMGN4-201ENST00000377575 DSTYKQ6XUX3 929 aa18.23■□□□□ 0.51
HMGN4-201ENST00000377575 UNC13DQ70J99 1090 aa18.23■□□□□ 0.51
HMGN4-201ENST00000377575 USP37Q86T82 979 aa18.23■□□□□ 0.51
HMGN4-201ENST00000377575 ZNF461Q8TAF7 563 aa18.23■□□□□ 0.51
HMGN4-201ENST00000377575 LEO1Q8WVC0 666 aaPredicted RBP18.23■□□□□ 0.51
HMGN4-201ENST00000377575 FAM213AQ9BRX8 229 aa18.23■□□□□ 0.51
HMGN4-201ENST00000377575 OXCT2Q9BYC2 517 aaPredicted RBP18.23■□□□□ 0.51
HMGN4-201ENST00000377575 LIMD1Q9UGP4 676 aa18.23■□□□□ 0.51
HMGN4-201ENST00000377575 FBXL5Q9UKA1 691 aa18.23■□□□□ 0.51
HMGN4-201ENST00000377575 ZDHHC9Q9Y397 364 aa18.23■□□□□ 0.51
HMGN4-201ENST00000377575 DOCK6Q96HP0 2047 aa18.23■□□□□ 0.51
HMGN4-201ENST00000377575 WDR27A2RRH5 827 aa18.22■□□□□ 0.51
HMGN4-201ENST00000377575 TMEM221A6NGB7 291 aa18.22■□□□□ 0.51
HMGN4-201ENST00000377575 M0R296 226 aa18.22■□□□□ 0.51
HMGN4-201ENST00000377575 CCL16O15467 120 aa18.22■□□□□ 0.51
HMGN4-201ENST00000377575 TBC1D4O60343 1298 aa18.22■□□□□ 0.51
HMGN4-201ENST00000377575 ODC1P11926 461 aa18.22■□□□□ 0.51
HMGN4-201ENST00000377575 ELF1P32519 619 aa18.22■□□□□ 0.51
HMGN4-201ENST00000377575 ARPP19P56211 112 aa18.22■□□□□ 0.51
HMGN4-201ENST00000377575 C9orf57Q5W0N0 161 aa18.22■□□□□ 0.51
HMGN4-201ENST00000377575 TPGS2Q68CL5 300 aa18.22■□□□□ 0.51
HMGN4-201ENST00000377575 CRELD2Q6UXH1 353 aaPredicted RBP18.22■□□□□ 0.51
HMGN4-201ENST00000377575 GET4Q7L5D6 327 aaPredicted RBP18.22■□□□□ 0.51
HMGN4-201ENST00000377575 BRSK2Q8IWQ3 736 aa18.22■□□□□ 0.51
HMGN4-201ENST00000377575 TMEM130Q8N3G9 435 aa18.22■□□□□ 0.51
HMGN4-201ENST00000377575 SAAL1Q96ER3 474 aa18.22■□□□□ 0.51
HMGN4-201ENST00000377575 RBAKQ9NYW8 714 aaPredicted RBP18.22■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms