RNA–Protein interactions for RNA: ENST00000377199.3

TRIM27-202, Transcript of tripartite motif containing 27, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM27, Length 2,967 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM27-202ENST00000377199 GBP1P32455 592 aa17.28■□□□□ 0.36
TRIM27-202ENST00000377199 CNTN2Q02246 1040 aa17.28■□□□□ 0.36
TRIM27-202ENST00000377199 CNGA2Q16280 664 aa17.28■□□□□ 0.36
TRIM27-202ENST00000377199 SAMD3Q8N6K7 520 aa17.28■□□□□ 0.36
TRIM27-202ENST00000377199 DDX27Q96GQ7 796 aaKnown RBP17.28■□□□□ 0.36
TRIM27-202ENST00000377199 RUNDC3BQ96NL0 473 aa17.28■□□□□ 0.36
TRIM27-202ENST00000377199 NTPCRQ9BSD7 190 aaKnown RBP17.28■□□□□ 0.36
TRIM27-202ENST00000377199 CNOT7Q9UIV1 285 aaKnown RBP17.28■□□□□ 0.36
TRIM27-202ENST00000377199 C5orf60A6NFR6 353 aa17.28■□□□□ 0.36
TRIM27-202ENST00000377199 TTLL13PA6NNM8 815 aa17.28■□□□□ 0.36
TRIM27-202ENST00000377199 ETS1P14921 441 aa17.28■□□□□ 0.36
TRIM27-202ENST00000377199 TCEAL1Q15170 157 aa17.28■□□□□ 0.36
TRIM27-202ENST00000377199 SPDYCQ5MJ68 293 aa17.28■□□□□ 0.36
TRIM27-202ENST00000377199 NUGGCQ68CJ6 796 aa17.28■□□□□ 0.36
TRIM27-202ENST00000377199 CYP4X1Q8N118 509 aa17.28■□□□□ 0.36
TRIM27-202ENST00000377199 GLIS1Q8NBF1 620 aa17.28■□□□□ 0.36
TRIM27-202ENST00000377199 RBBP8NLQ8NC74 664 aaPredicted RBP17.28■□□□□ 0.36
TRIM27-202ENST00000377199 GPRASP2Q96D09 838 aa17.28■□□□□ 0.36
TRIM27-202ENST00000377199 NUB1Q9Y5A7 615 aa17.28■□□□□ 0.36
TRIM27-202ENST00000377199 STBD1O95210 358 aa17.27■□□□□ 0.36
TRIM27-202ENST00000377199 EDN1P05305 212 aa17.27■□□□□ 0.36
TRIM27-202ENST00000377199 MARK3P27448 753 aa17.27■□□□□ 0.36
TRIM27-202ENST00000377199 OSTNP61366 133 aa17.27■□□□□ 0.36
TRIM27-202ENST00000377199 CUL2Q13617 745 aa17.27■□□□□ 0.36
TRIM27-202ENST00000377199 ZACNQ401N2 412 aa17.27■□□□□ 0.36
TRIM27-202ENST00000377199 IZUMO3Q5VZ72 239 aa17.27■□□□□ 0.36
TRIM27-202ENST00000377199 CDR2LQ86X02 465 aaPredicted RBP17.27■□□□□ 0.36
TRIM27-202ENST00000377199 ABCF3Q9NUQ8 709 aa17.27■□□□□ 0.36
TRIM27-202ENST00000377199 DYNC1LI1Q9Y6G9 523 aaKnown RBP17.27■□□□□ 0.36
TRIM27-202ENST00000377199 PMM2O15305 246 aa17.27■□□□□ 0.35
TRIM27-202ENST00000377199 PIAS1O75925 651 aa17.27■□□□□ 0.35
TRIM27-202ENST00000377199 GARTP22102 1010 aa17.27■□□□□ 0.35
TRIM27-202ENST00000377199 NOP14P78316 857 aaKnown RBP17.27■□□□□ 0.35
TRIM27-202ENST00000377199 DRP2Q13474 957 aa17.27■□□□□ 0.35
TRIM27-202ENST00000377199 LIN9Q5TKA1 542 aa17.27■□□□□ 0.35
TRIM27-202ENST00000377199 DEFB132Q7Z7B7 95 aa17.27■□□□□ 0.35
TRIM27-202ENST00000377199 CCT6BQ92526 530 aa17.27■□□□□ 0.35
TRIM27-202ENST00000377199 OSBPL8Q9BZF1 889 aa17.27■□□□□ 0.35
TRIM27-202ENST00000377199 STMN4Q9H169 189 aaPredicted RBP17.27■□□□□ 0.35
TRIM27-202ENST00000377199 ARHGAP28Q9P2N2 729 aa17.27■□□□□ 0.35
TRIM27-202ENST00000377199 SRRM3A6NNA2 597 aaPredicted RBP17.26■□□□□ 0.35
TRIM27-202ENST00000377199 IFNB1P01574 187 aa17.26■□□□□ 0.35
TRIM27-202ENST00000377199 CETPP11597 493 aa17.26■□□□□ 0.35
TRIM27-202ENST00000377199 BRAFP15056 766 aa17.26■□□□□ 0.35
TRIM27-202ENST00000377199 RXRBP28702 533 aa17.26■□□□□ 0.35
TRIM27-202ENST00000377199 TNFSF9P41273 254 aa17.26■□□□□ 0.35
TRIM27-202ENST00000377199 PLCB3Q01970 1234 aa17.26■□□□□ 0.35
TRIM27-202ENST00000377199 P3H1Q32P28 736 aa17.26■□□□□ 0.35
TRIM27-202ENST00000377199 MTMR14Q8NCE2 650 aa17.26■□□□□ 0.35
TRIM27-202ENST00000377199 ZNF280CQ8ND82 737 aa17.26■□□□□ 0.35
TRIM27-202ENST00000377199 GADD45GIP1Q8TAE8 222 aaPredicted RBP17.26■□□□□ 0.35
TRIM27-202ENST00000377199 C10orf88Q9H8K7 445 aa17.26■□□□□ 0.35
TRIM27-202ENST00000377199 CYP39A1Q9NYL5 469 aa17.26■□□□□ 0.35
TRIM27-202ENST00000377199 ZNF214Q9UL59 606 aaPredicted RBP17.26■□□□□ 0.35
TRIM27-202ENST00000377199 CCT8L1PA6NM43 557 aa17.26■□□□□ 0.35
TRIM27-202ENST00000377199 GOLGA8SH3BPF8 625 aa17.26■□□□□ 0.35
TRIM27-202ENST00000377199 GOLGA8MH3BSY2 632 aa17.26■□□□□ 0.35
TRIM27-202ENST00000377199 PROSCO94903 275 aa17.26■□□□□ 0.35
TRIM27-202ENST00000377199 ITIH2P19823 946 aa17.26■□□□□ 0.35
TRIM27-202ENST00000377199 GMPSP49915 693 aaPredicted RBP17.26■□□□□ 0.35
TRIM27-202ENST00000377199 DYNLT1P63172 113 aa17.26■□□□□ 0.35
TRIM27-202ENST00000377199 MAP3K10Q02779 954 aa17.26■□□□□ 0.35
TRIM27-202ENST00000377199 MAMLD1Q13495 774 aa17.26■□□□□ 0.35
TRIM27-202ENST00000377199 HIBCHQ6NVY1 386 aaPredicted RBP17.26■□□□□ 0.35
TRIM27-202ENST00000377199 MIS18BP1Q6P0N0 1132 aa17.26■□□□□ 0.35
TRIM27-202ENST00000377199 DLK2Q6UY11 383 aa17.26■□□□□ 0.35
TRIM27-202ENST00000377199 MON1BQ7L1V2 547 aa17.26■□□□□ 0.35
TRIM27-202ENST00000377199 ARMC9Q7Z3E5 817 aa17.26■□□□□ 0.35
TRIM27-202ENST00000377199 C12orf50Q8NA57 414 aaPredicted RBP17.26■□□□□ 0.35
TRIM27-202ENST00000377199 ATL2Q8NHH9 583 aa17.26■□□□□ 0.35
TRIM27-202ENST00000377199 TCP11Q8WWU5 503 aa17.26■□□□□ 0.35
TRIM27-202ENST00000377199 SLC7A3Q8WY07 619 aa17.26■□□□□ 0.35
TRIM27-202ENST00000377199 ZBED3Q96IU2 234 aaPredicted RBP17.26■□□□□ 0.35
TRIM27-202ENST00000377199 HOMER3Q9NSC5 361 aa17.26■□□□□ 0.35
TRIM27-202ENST00000377199 NINJ2Q9NZG7 142 aa17.26■□□□□ 0.35
TRIM27-202ENST00000377199 ZNF148Q9UQR1 794 aa17.26■□□□□ 0.35
TRIM27-202ENST00000377199 ZNFX1Q9P2E3 1918 aaKnown RBP17.26■□□□□ 0.35
TRIM27-202ENST00000377199 TTC4O95801 387 aa17.25■□□□□ 0.35
TRIM27-202ENST00000377199 C4BPAP04003 597 aaKnown RBP17.25■□□□□ 0.35
TRIM27-202ENST00000377199 ATP4AP20648 1035 aa17.25■□□□□ 0.35
TRIM27-202ENST00000377199 GLRA2P23416 452 aa17.25■□□□□ 0.35
TRIM27-202ENST00000377199 GTF2H1P32780 548 aa17.25■□□□□ 0.35
TRIM27-202ENST00000377199 E2F5Q15329 346 aa17.25■□□□□ 0.35
TRIM27-202ENST00000377199 TMED2Q15363 201 aa17.25■□□□□ 0.35
TRIM27-202ENST00000377199 CYB5D1Q6P9G0 228 aa17.25■□□□□ 0.35
TRIM27-202ENST00000377199 CRELD2Q6UXH1 353 aaPredicted RBP17.25■□□□□ 0.35
TRIM27-202ENST00000377199 TRMT10CQ7L0Y3 403 aaKnown RBP17.25■□□□□ 0.35
TRIM27-202ENST00000377199 TBC1D1Q86TI0 1168 aaPredicted RBP17.25■□□□□ 0.35
TRIM27-202ENST00000377199 PNMA8AQ86V59 439 aaPredicted RBP17.25■□□□□ 0.35
TRIM27-202ENST00000377199 RHOT1Q8IXI2 618 aa17.25■□□□□ 0.35
TRIM27-202ENST00000377199 FHDC1Q9C0D6 1143 aaPredicted RBP17.25■□□□□ 0.35
TRIM27-202ENST00000377199 ZNF302Q9NR11 478 aa17.25■□□□□ 0.35
TRIM27-202ENST00000377199 WHRNQ9P202 907 aa17.25■□□□□ 0.35
TRIM27-202ENST00000377199 CST3P01034 146 aaPredicted RBP17.25■□□□□ 0.35
TRIM27-202ENST00000377199 IVDP26440 423 aa17.25■□□□□ 0.35
TRIM27-202ENST00000377199 NOMO3P69849 1222 aa17.25■□□□□ 0.35
TRIM27-202ENST00000377199 ABHD15Q6UXT9 468 aa17.25■□□□□ 0.35
TRIM27-202ENST00000377199 ENOSF1Q7L5Y1 443 aa17.25■□□□□ 0.35
TRIM27-202ENST00000377199 ANKRD35Q8N283 1001 aa17.25■□□□□ 0.35
TRIM27-202ENST00000377199 TMEM130Q8N3G9 435 aa17.25■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms