RNA–Protein interactions for RNA: ENST00000376899.8

YIF1A-202, Transcript of Yip1 interacting factor homolog A, membrane trafficking protein, humanhuman

TSL 2

Gene YIF1A, Length 1,042 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YIF1A-202ENST00000376899 PABPC5Q96DU9 382 aaKnown RBP24.49■■□□□ 1.51
YIF1A-202ENST00000376899 B3GALT6Q96L58 329 aa24.49■■□□□ 1.51
YIF1A-202ENST00000376899 CGRRF1Q99675 332 aa24.49■■□□□ 1.51
YIF1A-202ENST00000376899 RXFP1Q9HBX9 757 aa24.49■■□□□ 1.51
YIF1A-202ENST00000376899 NUB1Q9Y5A7 615 aa24.49■■□□□ 1.51
YIF1A-202ENST00000376899 BRWD1Q9NSI6 2320 aa24.49■■□□□ 1.51
YIF1A-202ENST00000376899 MCM4P33991 863 aa24.48■■□□□ 1.51
YIF1A-202ENST00000376899 PMS1P54277 932 aaKnown RBP24.48■■□□□ 1.51
YIF1A-202ENST00000376899 LRRC63Q05C16 580 aa24.48■■□□□ 1.51
YIF1A-202ENST00000376899 KCNC3Q14003 757 aa24.48■■□□□ 1.51
YIF1A-202ENST00000376899 KIAA1841Q6NSI8 718 aa24.48■■□□□ 1.51
YIF1A-202ENST00000376899 FOXR2Q6PJQ5 311 aa24.48■■□□□ 1.51
YIF1A-202ENST00000376899 RBM23Q86U06 439 aaKnown RBP24.48■■□□□ 1.51
YIF1A-202ENST00000376899 PLEKHO2Q8TD55 490 aa24.48■■□□□ 1.51
YIF1A-202ENST00000376899 ANKRD36BP1Q96IX9 119 aa24.48■■□□□ 1.51
YIF1A-202ENST00000376899 MTMR12Q9C0I1 747 aa24.48■■□□□ 1.51
YIF1A-202ENST00000376899 ITGA11Q9UKX5 1188 aa24.48■■□□□ 1.51
YIF1A-202ENST00000376899 FRMD4BQ9Y2L6 1034 aa24.48■■□□□ 1.51
YIF1A-202ENST00000376899 TSC2P49815 1807 aa24.47■■□□□ 1.51
YIF1A-202ENST00000376899 REV3LO60673 3130 aa24.47■■□□□ 1.51
YIF1A-202ENST00000376899 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP24.47■■□□□ 1.51
YIF1A-202ENST00000376899 I3L4J1 428 aa24.47■■□□□ 1.51
YIF1A-202ENST00000376899 M0QZQ0 153 aa24.47■■□□□ 1.51
YIF1A-202ENST00000376899 SYN3O14994 580 aa24.47■■□□□ 1.51
YIF1A-202ENST00000376899 PER2O15055 1255 aa24.47■■□□□ 1.51
YIF1A-202ENST00000376899 CLASP2O75122 1294 aaKnown RBP24.47■■□□□ 1.51
YIF1A-202ENST00000376899 TMEM191BP0C7N4 346 aa24.47■■□□□ 1.51
YIF1A-202ENST00000376899 CLDN10P78369 228 aa24.47■■□□□ 1.51
YIF1A-202ENST00000376899 ADAM9Q13443 819 aa24.47■■□□□ 1.51
YIF1A-202ENST00000376899 ADAM15Q13444 863 aa24.47■■□□□ 1.51
YIF1A-202ENST00000376899 DUOXA2Q1HG44 320 aa24.47■■□□□ 1.51
YIF1A-202ENST00000376899 CEP135Q66GS9 1140 aa24.47■■□□□ 1.51
YIF1A-202ENST00000376899 LMBRD2Q68DH5 695 aaPredicted RBP24.47■■□□□ 1.51
YIF1A-202ENST00000376899 ANKRD40Q6AI12 368 aa24.47■■□□□ 1.51
YIF1A-202ENST00000376899 OR5B17Q8NGF7 314 aa24.47■■□□□ 1.51
YIF1A-202ENST00000376899 PARD3BQ8TEW8 1205 aa24.47■■□□□ 1.51
YIF1A-202ENST00000376899 RIN2Q8WYP3 895 aaPredicted RBP24.47■■□□□ 1.51
YIF1A-202ENST00000376899 KLHL5Q96PQ7 755 aa24.47■■□□□ 1.51
YIF1A-202ENST00000376899 FNBP1Q96RU3 617 aa24.47■■□□□ 1.51
YIF1A-202ENST00000376899 TSG101Q99816 390 aa24.47■■□□□ 1.51
YIF1A-202ENST00000376899 EMILIN2Q9BXX0 1053 aa24.47■■□□□ 1.51
YIF1A-202ENST00000376899 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP24.47■■□□□ 1.51
YIF1A-202ENST00000376899 FNIP2Q9P278 1114 aa24.47■■□□□ 1.51
YIF1A-202ENST00000376899 COG5Q9UP83 839 aa24.47■■□□□ 1.51
YIF1A-202ENST00000376899 C2CD2LO14523 706 aa24.46■■□□□ 1.51
YIF1A-202ENST00000376899 AKAP3O75969 853 aa24.46■■□□□ 1.51
YIF1A-202ENST00000376899 GLP2RO95838 553 aa24.46■■□□□ 1.51
YIF1A-202ENST00000376899 CNPP09543 421 aaKnown RBP24.46■■□□□ 1.51
YIF1A-202ENST00000376899 TKTP29401 623 aaKnown RBP24.46■■□□□ 1.51
YIF1A-202ENST00000376899 CA8P35219 290 aa24.46■■□□□ 1.51
YIF1A-202ENST00000376899 LILRA4P59901 499 aa24.46■■□□□ 1.51
YIF1A-202ENST00000376899 MCCD1P59942 119 aaPredicted RBP24.46■■□□□ 1.51
YIF1A-202ENST00000376899 CREMQ03060 361 aa24.46■■□□□ 1.51
YIF1A-202ENST00000376899 ENPEPQ07075 957 aa24.46■■□□□ 1.51
YIF1A-202ENST00000376899 SKIV2LQ15477 1246 aaKnown RBP24.46■■□□□ 1.51
YIF1A-202ENST00000376899 PDXDC1Q6P996 788 aa24.46■■□□□ 1.51
YIF1A-202ENST00000376899 LNX1Q8TBB1 728 aaPredicted RBP24.46■■□□□ 1.51
YIF1A-202ENST00000376899 TMC2Q8TDI7 906 aa24.46■■□□□ 1.51
YIF1A-202ENST00000376899 CCDC127Q96BQ5 260 aa24.46■■□□□ 1.51
YIF1A-202ENST00000376899 FAM84AQ96KN4 292 aa24.46■■□□□ 1.51
YIF1A-202ENST00000376899 MKNK1Q9BUB5 465 aa24.46■■□□□ 1.51
YIF1A-202ENST00000376899 PRDM6Q9NQX0 595 aa24.46■■□□□ 1.51
YIF1A-202ENST00000376899 SIX4Q9UIU6 781 aa24.46■■□□□ 1.51
YIF1A-202ENST00000376899 PCDHB8Q9UN66 801 aa24.46■■□□□ 1.51
YIF1A-202ENST00000376899 PLXNA3P51805 1871 aa24.46■■□□□ 1.51
YIF1A-202ENST00000376899 COL6A3P12111 3177 aa24.45■■□□□ 1.5
YIF1A-202ENST00000376899 TRIM49BA6NDI0 452 aa24.45■■□□□ 1.5
YIF1A-202ENST00000376899 TNNC2P02585 160 aa24.45■■□□□ 1.5
YIF1A-202ENST00000376899 ITGB3P05106 788 aa24.45■■□□□ 1.5
YIF1A-202ENST00000376899 DLATP10515 647 aaKnown RBP24.45■■□□□ 1.5
YIF1A-202ENST00000376899 POLR2BP30876 1174 aaKnown RBP24.45■■□□□ 1.5
YIF1A-202ENST00000376899 TAF6P49848 677 aa24.45■■□□□ 1.5
YIF1A-202ENST00000376899 FKBP3Q00688 224 aaKnown RBP24.45■■□□□ 1.5
YIF1A-202ENST00000376899 TMEM184AQ6ZMB5 413 aa24.45■■□□□ 1.5
YIF1A-202ENST00000376899 RBM43Q6ZSC3 357 aaKnown RBP24.45■■□□□ 1.5
YIF1A-202ENST00000376899 CEP57Q86XR8 500 aa24.45■■□□□ 1.5
YIF1A-202ENST00000376899 LRRC52Q8N7C0 313 aa24.45■■□□□ 1.5
YIF1A-202ENST00000376899 VN1R2Q8NFZ6 395 aa24.45■■□□□ 1.5
YIF1A-202ENST00000376899 ZNF560Q96MR9 790 aa24.45■■□□□ 1.5
YIF1A-202ENST00000376899 IGFLR1Q9H665 355 aa24.45■■□□□ 1.5
YIF1A-202ENST00000376899 UBE2ZQ9H832 354 aaPredicted RBP24.45■■□□□ 1.5
YIF1A-202ENST00000376899 LRRIQ3A6PVS8 624 aaPredicted RBP24.44■■□□□ 1.5
YIF1A-202ENST00000376899 CETN3O15182 167 aa24.44■■□□□ 1.5
YIF1A-202ENST00000376899 SPTLC1O15269 473 aa24.44■■□□□ 1.5
YIF1A-202ENST00000376899 TEX28O15482 410 aa24.44■■□□□ 1.5
YIF1A-202ENST00000376899 LINC01565O15544 149 aa24.44■■□□□ 1.5
YIF1A-202ENST00000376899 TNNI1P19237 187 aa24.44■■□□□ 1.5
YIF1A-202ENST00000376899 PSMC2P35998 433 aaKnown RBP24.44■■□□□ 1.5
YIF1A-202ENST00000376899 LTBRP36941 435 aa24.44■■□□□ 1.5
YIF1A-202ENST00000376899 PNPLA4P41247 253 aa24.44■■□□□ 1.5
YIF1A-202ENST00000376899 PSMD5Q16401 504 aa24.44■■□□□ 1.5
YIF1A-202ENST00000376899 TTI2Q6NXR4 508 aa24.44■■□□□ 1.5
YIF1A-202ENST00000376899 PRSS55Q6UWB4 352 aaPredicted RBP24.44■■□□□ 1.5
YIF1A-202ENST00000376899 PPFIBP1Q86W92 1011 aa24.44■■□□□ 1.5
YIF1A-202ENST00000376899 FAM186BQ8IYM0 893 aa24.44■■□□□ 1.5
YIF1A-202ENST00000376899 SLC22A17Q8WUG5 538 aa24.44■■□□□ 1.5
YIF1A-202ENST00000376899 NELFBQ8WX92 580 aa24.44■■□□□ 1.5
YIF1A-202ENST00000376899 ZNF516Q92618 1163 aa24.44■■□□□ 1.5
YIF1A-202ENST00000376899 HLA-CQ95604 372 aa24.44■■□□□ 1.5
YIF1A-202ENST00000376899 BORCS6Q96GS4 357 aa24.44■■□□□ 1.5
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms