RNA–Protein interactions for RNA: ENST00000376570.8

DDR1-227, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene DDR1, Length 3,820 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-227ENST00000376570 VSIG1Q86XK7 387 aa12.39□□□□□ -0.43
DDR1-227ENST00000376570 ARHGEF2Q92974 986 aaKnown RBP12.39□□□□□ -0.43
DDR1-227ENST00000376570 CAMKK2Q96RR4 588 aa12.39□□□□□ -0.43
DDR1-227ENST00000376570 CCDC195A0A1B0GUA6 201 aa12.38□□□□□ -0.43
DDR1-227ENST00000376570 AGPSO00116 658 aa12.38□□□□□ -0.43
DDR1-227ENST00000376570 SUPT20HL2P0C7V6 817 aa12.38□□□□□ -0.43
DDR1-227ENST00000376570 CHN1P15882 459 aa12.38□□□□□ -0.43
DDR1-227ENST00000376570 DSG3P32926 999 aa12.38□□□□□ -0.43
DDR1-227ENST00000376570 ARPP19P56211 112 aa12.38□□□□□ -0.43
DDR1-227ENST00000376570 ALS2CLQ60I27 953 aa12.38□□□□□ -0.43
DDR1-227ENST00000376570 MOXD1Q6UVY6 613 aa12.38□□□□□ -0.43
DDR1-227ENST00000376570 FAM83AQ86UY5 434 aa12.38□□□□□ -0.43
DDR1-227ENST00000376570 KIF2BQ8N4N8 673 aa12.38□□□□□ -0.43
DDR1-227ENST00000376570 ERP44Q9BS26 406 aa12.38□□□□□ -0.43
DDR1-227ENST00000376570 TJP2Q9UDY2 1190 aa12.38□□□□□ -0.43
DDR1-227ENST00000376570 TIMM13Q9Y5L4 95 aaPredicted RBP12.38□□□□□ -0.43
DDR1-227ENST00000376570 CNTNAP1P78357 1384 aa12.38□□□□□ -0.43
DDR1-227ENST00000376570 XIRP1Q702N8 1843 aaKnown RBP12.38□□□□□ -0.43
DDR1-227ENST00000376570 SPDYE16A6NNV3 312 aaPredicted RBP12.38□□□□□ -0.43
DDR1-227ENST00000376570 ATP2A1O14983 1001 aa12.38□□□□□ -0.43
DDR1-227ENST00000376570 AKAP5P24588 427 aa12.38□□□□□ -0.43
DDR1-227ENST00000376570 MTMR3Q13615 1198 aa12.38□□□□□ -0.43
DDR1-227ENST00000376570 NLRP14Q86W24 1093 aa12.38□□□□□ -0.43
DDR1-227ENST00000376570 HASPINQ8TF76 798 aa12.38□□□□□ -0.43
DDR1-227ENST00000376570 AENQ8WTP8 325 aaKnown RBP12.38□□□□□ -0.43
DDR1-227ENST00000376570 LPIN3Q9BQK8 851 aa12.38□□□□□ -0.43
DDR1-227ENST00000376570 ZSWIM1Q9BR11 485 aa12.38□□□□□ -0.43
DDR1-227ENST00000376570 ADPGKQ9BRR6 497 aa12.38□□□□□ -0.43
DDR1-227ENST00000376570 FHDC1Q9C0D6 1143 aaPredicted RBP12.38□□□□□ -0.43
DDR1-227ENST00000376570 WDR3Q9UNX4 943 aaKnown RBP eCLIP12.38□□□□□ -0.43
DDR1-227ENST00000376570 NUB1Q9Y5A7 615 aa12.38□□□□□ -0.43
DDR1-227ENST00000376570 CCDC188H7C350 402 aa12.38□□□□□ -0.43
DDR1-227ENST00000376570 MYL3P08590 195 aa12.38□□□□□ -0.43
DDR1-227ENST00000376570 GLRA2P23416 452 aa12.38□□□□□ -0.43
DDR1-227ENST00000376570 MAN1A1P33908 653 aa12.38□□□□□ -0.43
DDR1-227ENST00000376570 PTGER2P43116 358 aa12.38□□□□□ -0.43
DDR1-227ENST00000376570 PLCB4Q15147 1175 aa12.38□□□□□ -0.43
DDR1-227ENST00000376570 GKAP1Q5VSY0 366 aaPredicted RBP12.38□□□□□ -0.43
DDR1-227ENST00000376570 EP400NLQ6ZTU2 488 aa12.38□□□□□ -0.43
DDR1-227ENST00000376570 SLC13A5Q86YT5 568 aaPredicted RBP12.38□□□□□ -0.43
DDR1-227ENST00000376570 TMEM192Q8IY95 271 aa12.38□□□□□ -0.43
DDR1-227ENST00000376570 CDCA5Q96FF9 252 aa12.38□□□□□ -0.43
DDR1-227ENST00000376570 SPATC1LQ9H0A9 340 aa12.38□□□□□ -0.43
DDR1-227ENST00000376570 INTUQ9ULD6 942 aa12.38□□□□□ -0.43
DDR1-227ENST00000376570 R3HDM2Q9Y2K5 976 aaKnown RBP12.38□□□□□ -0.43
DDR1-227ENST00000376570 NR2E3Q9Y5X4 410 aa12.38□□□□□ -0.43
DDR1-227ENST00000376570 KITP10721 976 aa12.37□□□□□ -0.43
DDR1-227ENST00000376570 TCF4P15884 667 aa12.37□□□□□ -0.43
DDR1-227ENST00000376570 CA4P22748 312 aa12.37□□□□□ -0.43
DDR1-227ENST00000376570 POLR2BP30876 1174 aaKnown RBP12.37□□□□□ -0.43
DDR1-227ENST00000376570 DUOXA2Q1HG44 320 aa12.37□□□□□ -0.43
DDR1-227ENST00000376570 TDRD10Q5VZ19 366 aaKnown RBP12.37□□□□□ -0.43
DDR1-227ENST00000376570 BTNL9Q6UXG8 535 aa12.37□□□□□ -0.43
DDR1-227ENST00000376570 AGR3Q8TD06 166 aa12.37□□□□□ -0.43
DDR1-227ENST00000376570 LRRC4CQ9HCJ2 640 aa12.37□□□□□ -0.43
DDR1-227ENST00000376570 BTBD7Q9P203 1132 aa12.37□□□□□ -0.43
DDR1-227ENST00000376570 KLRG2A4D1S0 409 aaPredicted RBP12.37□□□□□ -0.43
DDR1-227ENST00000376570 ONECUT3O60422 494 aaPredicted RBP12.37□□□□□ -0.43
DDR1-227ENST00000376570 SLC4A1P02730 911 aa12.37□□□□□ -0.43
DDR1-227ENST00000376570 BRAFP15056 766 aa12.37□□□□□ -0.43
DDR1-227ENST00000376570 ADCYAP1R1P41586 468 aa12.37□□□□□ -0.43
DDR1-227ENST00000376570 WNT7BP56706 349 aa12.37□□□□□ -0.43
DDR1-227ENST00000376570 MXRA7P84157 204 aa12.37□□□□□ -0.43
DDR1-227ENST00000376570 CDK17Q00537 523 aa12.37□□□□□ -0.43
DDR1-227ENST00000376570 PDIA2Q13087 525 aaKnown RBP12.37□□□□□ -0.43
DDR1-227ENST00000376570 CHADLQ6NUI6 762 aa12.37□□□□□ -0.43
DDR1-227ENST00000376570 APOBEC3FQ8IUX4 373 aaKnown RBP12.37□□□□□ -0.43
DDR1-227ENST00000376570 ANKS4BQ8N8V4 417 aa12.37□□□□□ -0.43
DDR1-227ENST00000376570 C7orf43Q8WVR3 580 aa12.37□□□□□ -0.43
DDR1-227ENST00000376570 OPTNQ96CV9 577 aa12.37□□□□□ -0.43
DDR1-227ENST00000376570 OSBPL8Q9BZF1 889 aa12.37□□□□□ -0.43
DDR1-227ENST00000376570 ASCC2Q9H1I8 757 aaPredicted RBP12.37□□□□□ -0.43
DDR1-227ENST00000376570 C12orf65Q9H3J6 166 aaKnown RBP12.37□□□□□ -0.43
DDR1-227ENST00000376570 SETD4Q9NVD3 440 aa12.37□□□□□ -0.43
DDR1-227ENST00000376570 RNF14Q9UBS8 474 aa12.37□□□□□ -0.43
DDR1-227ENST00000376570 UBIAD1Q9Y5Z9 338 aa12.37□□□□□ -0.43
DDR1-227ENST00000376570 PPP1R37O75864 691 aa12.37□□□□□ -0.43
DDR1-227ENST00000376570 NT5C2P49902 561 aa12.37□□□□□ -0.43
DDR1-227ENST00000376570 CDH6P55285 790 aa12.37□□□□□ -0.43
DDR1-227ENST00000376570 FMO1Q01740 532 aa12.37□□□□□ -0.43
DDR1-227ENST00000376570 NME3Q13232 169 aa12.37□□□□□ -0.43
DDR1-227ENST00000376570 TRIM68Q6AZZ1 485 aa12.37□□□□□ -0.43
DDR1-227ENST00000376570 AGAP3Q96P47 875 aa12.37□□□□□ -0.43
DDR1-227ENST00000376570 MRPL4Q9BYD3 311 aaKnown RBP12.37□□□□□ -0.43
DDR1-227ENST00000376570 METTL5Q9NRN9 209 aaKnown RBP12.37□□□□□ -0.43
DDR1-227ENST00000376570 HAUS2Q9NVX0 235 aa12.37□□□□□ -0.43
DDR1-227ENST00000376570 CPA4Q9UI42 421 aa12.37□□□□□ -0.43
DDR1-227ENST00000376570 PCDHGC5Q9Y5F6 944 aa12.37□□□□□ -0.43
DDR1-227ENST00000376570 SYNGAP1Q96PV0 1343 aa12.37□□□□□ -0.43
DDR1-227ENST00000376570 RASA4BC9J798 803 aa12.36□□□□□ -0.43
DDR1-227ENST00000376570 RASA4O43374 803 aa12.36□□□□□ -0.43
DDR1-227ENST00000376570 CREB3O43889 395 aa12.36□□□□□ -0.43
DDR1-227ENST00000376570 CREB1P16220 341 aa12.36□□□□□ -0.43
DDR1-227ENST00000376570 PPP2R2AP63151 447 aa12.36□□□□□ -0.43
DDR1-227ENST00000376570 CDR2Q01850 454 aa12.36□□□□□ -0.43
DDR1-227ENST00000376570 CUL1Q13616 776 aa12.36□□□□□ -0.43
DDR1-227ENST00000376570 CUL2Q13617 745 aa12.36□□□□□ -0.43
DDR1-227ENST00000376570 ACOT1Q86TX2 421 aa12.36□□□□□ -0.43
DDR1-227ENST00000376570 C4orf19Q8IY42 314 aa12.36□□□□□ -0.43
DDR1-227ENST00000376570 TMEM35BQ8NCS4 154 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms