RNA–Protein interactions for RNA: ENST00000376406.7

MDC1-201, Transcript of mediator of DNA damage checkpoint 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene MDC1, Length 7,576 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-201ENST00000376406 TMEM247A6NEH6 219 aa11.57□□□□□ -0.56
MDC1-201ENST00000376406 HAUS5O94927 633 aa11.57□□□□□ -0.56
MDC1-201ENST00000376406 SLC4A1P02730 911 aa11.57□□□□□ -0.56
MDC1-201ENST00000376406 ZNF677Q86XU0 584 aa11.57□□□□□ -0.56
MDC1-201ENST00000376406 GMCL1Q96IK5 515 aa11.57□□□□□ -0.56
MDC1-201ENST00000376406 FHOD1Q9Y613 1164 aa11.57□□□□□ -0.56
MDC1-201ENST00000376406 ALDH7A1P49419 539 aaKnown RBP11.57□□□□□ -0.56
MDC1-201ENST00000376406 OAZ1P54368 228 aa11.57□□□□□ -0.56
MDC1-201ENST00000376406 KIF19Q2TAC6 998 aa11.57□□□□□ -0.56
MDC1-201ENST00000376406 THOC1Q96FV9 657 aaKnown RBP11.57□□□□□ -0.56
MDC1-201ENST00000376406 SP110Q9HB58 689 aa11.57□□□□□ -0.56
MDC1-201ENST00000376406 TMEM8AQ9HCN3 771 aa11.57□□□□□ -0.56
MDC1-201ENST00000376406 DSEQ9UL01 958 aa11.57□□□□□ -0.56
MDC1-201ENST00000376406 SALL1Q9NSC2 1324 aa11.56□□□□□ -0.56
MDC1-201ENST00000376406 NR3C2P08235 984 aa11.56□□□□□ -0.56
MDC1-201ENST00000376406 TMEM253P0C7T8 217 aa11.56□□□□□ -0.56
MDC1-201ENST00000376406 CYP2B6P20813 491 aa11.56□□□□□ -0.56
MDC1-201ENST00000376406 NOP14P78316 857 aaKnown RBP11.56□□□□□ -0.56
MDC1-201ENST00000376406 GRIN1Q05586 938 aa11.56□□□□□ -0.56
MDC1-201ENST00000376406 MOXD1Q6UVY6 613 aa11.56□□□□□ -0.56
MDC1-201ENST00000376406 KAZALD1Q96I82 304 aa11.56□□□□□ -0.56
MDC1-201ENST00000376406 FOPNLQ96NB1 174 aa11.56□□□□□ -0.56
MDC1-201ENST00000376406 TMEM39BQ9GZU3 492 aa11.56□□□□□ -0.56
MDC1-201ENST00000376406 SMG5Q9UPR3 1016 aaKnown RBP11.56□□□□□ -0.56
MDC1-201ENST00000376406 SPDYE2BA6NHP3 402 aa11.56□□□□□ -0.56
MDC1-201ENST00000376406 HNRNPCL1O60812 293 aaKnown RBP11.56□□□□□ -0.56
MDC1-201ENST00000376406 SPDYE6P0CI01 402 aa11.56□□□□□ -0.56
MDC1-201ENST00000376406 KITP10721 976 aa11.56□□□□□ -0.56
MDC1-201ENST00000376406 BCAR1P56945 870 aa11.56□□□□□ -0.56
MDC1-201ENST00000376406 ANO4Q32M45 955 aa11.56□□□□□ -0.56
MDC1-201ENST00000376406 TRIM54Q9BYV2 358 aa11.56□□□□□ -0.56
MDC1-201ENST00000376406 A8MXQ7 604 aa11.56□□□□□ -0.56
MDC1-201ENST00000376406 CFLARO15519 480 aa11.56□□□□□ -0.56
MDC1-201ENST00000376406 ARFIP2P53365 341 aa11.56□□□□□ -0.56
MDC1-201ENST00000376406 AP2B1P63010 937 aa11.56□□□□□ -0.56
MDC1-201ENST00000376406 PDE1CQ14123 709 aaPredicted RBP11.56□□□□□ -0.56
MDC1-201ENST00000376406 USP13Q92995 863 aaPredicted RBP11.56□□□□□ -0.56
MDC1-201ENST00000376406 GRIK1P39086 918 aa11.56□□□□□ -0.56
MDC1-201ENST00000376406 YWHAHQ04917 246 aaPredicted RBP11.56□□□□□ -0.56
MDC1-201ENST00000376406 SGSM1Q2NKQ1 1148 aa11.56□□□□□ -0.56
MDC1-201ENST00000376406 KLHDC7AQ5VTJ3 777 aa11.56□□□□□ -0.56
MDC1-201ENST00000376406 REXO1L1PQ8IX06 675 aa11.56□□□□□ -0.56
MDC1-201ENST00000376406 GMCL1P1Q8NEA9 526 aa11.56□□□□□ -0.56
MDC1-201ENST00000376406 NR2E3Q9Y5X4 410 aa11.56□□□□□ -0.56
MDC1-201ENST00000376406 EIF3EP60228 445 aaKnown RBP11.56□□□□□ -0.56
MDC1-201ENST00000376406 TROAPQ12815 778 aa11.56□□□□□ -0.56
MDC1-201ENST00000376406 TRAPPC11Q7Z392 1133 aa11.56□□□□□ -0.56
MDC1-201ENST00000376406 CATSPER3Q86XQ3 398 aa11.56□□□□□ -0.56
MDC1-201ENST00000376406 TBC1D19Q8N5T2 526 aa11.56□□□□□ -0.56
MDC1-201ENST00000376406 PPM1NQ8N819 430 aa11.56□□□□□ -0.56
MDC1-201ENST00000376406 USP38Q8NB14 1042 aa11.56□□□□□ -0.56
MDC1-201ENST00000376406 TTC8Q8TAM2 541 aa11.56□□□□□ -0.56
MDC1-201ENST00000376406 ZNF473Q8WTR7 871 aaKnown RBP11.56□□□□□ -0.56
MDC1-201ENST00000376406 ISCUQ9H1K1 167 aa11.56□□□□□ -0.56
MDC1-201ENST00000376406 SEC23IPQ9Y6Y8 1000 aaKnown RBP11.56□□□□□ -0.56
MDC1-201ENST00000376406 PXDNQ92626 1479 aa11.56□□□□□ -0.56
MDC1-201ENST00000376406 CCDC195A0A1B0GUA6 201 aa11.56□□□□□ -0.56
MDC1-201ENST00000376406 NVLO15381 856 aaKnown RBP11.56□□□□□ -0.56
MDC1-201ENST00000376406 SETSIPP0DME0 302 aa11.56□□□□□ -0.56
MDC1-201ENST00000376406 IFNA8P32881 189 aa11.56□□□□□ -0.56
MDC1-201ENST00000376406 CPA5Q8WXQ8 436 aa11.56□□□□□ -0.56
MDC1-201ENST00000376406 FUCA2Q9BTY2 467 aa11.56□□□□□ -0.56
MDC1-201ENST00000376406 CDH6P55285 790 aa11.55□□□□□ -0.56
MDC1-201ENST00000376406 TMEM132BQ14DG7 1078 aa11.55□□□□□ -0.56
MDC1-201ENST00000376406 P3H1Q32P28 736 aa11.55□□□□□ -0.56
MDC1-201ENST00000376406 TMEM169Q96HH4 297 aa11.55□□□□□ -0.56
MDC1-201ENST00000376406 CCDC22O60826 627 aa11.55□□□□□ -0.56
MDC1-201ENST00000376406 PPP1R37O75864 691 aa11.55□□□□□ -0.56
MDC1-201ENST00000376406 OCRLQ01968 901 aa11.55□□□□□ -0.56
MDC1-201ENST00000376406 SLC12A1Q13621 1099 aa11.55□□□□□ -0.56
MDC1-201ENST00000376406 CDK5RAP1Q96SZ6 601 aaKnown RBP11.55□□□□□ -0.56
MDC1-201ENST00000376406 STOML1Q9UBI4 398 aa11.55□□□□□ -0.56
MDC1-201ENST00000376406 KDM1AO60341 852 aa11.55□□□□□ -0.56
MDC1-201ENST00000376406 SSTR3P32745 418 aaPredicted RBP11.55□□□□□ -0.56
MDC1-201ENST00000376406 KRT80Q6KB66 452 aa11.55□□□□□ -0.56
MDC1-201ENST00000376406 FRA10AC1Q70Z53 315 aa11.55□□□□□ -0.56
MDC1-201ENST00000376406 NUDCD3Q8IVD9 361 aa11.55□□□□□ -0.56
MDC1-201ENST00000376406 FOXP3Q9BZS1 431 aa11.55□□□□□ -0.56
MDC1-201ENST00000376406 MLXIPLQ9NP71 852 aa11.55□□□□□ -0.56
MDC1-201ENST00000376406 RAD51CO43502 376 aa11.55□□□□□ -0.56
MDC1-201ENST00000376406 EXTL3O43909 919 aa11.55□□□□□ -0.56
MDC1-201ENST00000376406 CYP2C9P11712 490 aa11.55□□□□□ -0.56
MDC1-201ENST00000376406 HP1BP3Q5SSJ5 553 aaPredicted RBP11.55□□□□□ -0.56
MDC1-201ENST00000376406 SLITRK1Q96PX8 696 aa11.55□□□□□ -0.56
MDC1-201ENST00000376406 NDE1Q9NXR1 346 aa11.55□□□□□ -0.56
MDC1-201ENST00000376406 FAM205AQ6ZU69 1335 aa11.55□□□□□ -0.56
MDC1-201ENST00000376406 IL1R1P14778 569 aa11.55□□□□□ -0.56
MDC1-201ENST00000376406 CHN1P15882 459 aa11.55□□□□□ -0.56
MDC1-201ENST00000376406 RFC1P35251 1148 aaPredicted RBP11.55□□□□□ -0.56
MDC1-201ENST00000376406 AP1ARQ63HQ0 302 aa11.55□□□□□ -0.56
MDC1-201ENST00000376406 SLC30A5Q8TAD4 765 aa11.55□□□□□ -0.56
MDC1-201ENST00000376406 KANSL3Q9P2N6 904 aa11.55□□□□□ -0.56
MDC1-201ENST00000376406 STMN1P16949 149 aa11.54□□□□□ -0.56
MDC1-201ENST00000376406 TOB1P50616 345 aaPredicted RBP11.54□□□□□ -0.56
MDC1-201ENST00000376406 IL1RL1Q01638 556 aa11.54□□□□□ -0.56
MDC1-201ENST00000376406 EIF2B5Q13144 721 aaKnown RBP11.54□□□□□ -0.56
MDC1-201ENST00000376406 TSTA3Q13630 321 aaPredicted RBP11.54□□□□□ -0.56
MDC1-201ENST00000376406 LRRC14Q15048 493 aa11.54□□□□□ -0.56
MDC1-201ENST00000376406 C1orf146Q5VVC0 180 aa11.54□□□□□ -0.56
MDC1-201ENST00000376406 VPS11Q9H270 941 aa11.54□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms