RNA–Protein interactions for RNA: ENST00000375429.7

NELFE-202, Transcript of negative elongation factor complex member E, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene NELFE, Length 1,584 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFE-202ENST00000375429 RBP5P82980 135 aa22.24■■□□□ 1.15
NELFE-202ENST00000375429 TRPC3Q13507 836 aa22.24■■□□□ 1.15
NELFE-202ENST00000375429 UPP1Q16831 310 aa22.24■■□□□ 1.15
NELFE-202ENST00000375429 GBP6Q6ZN66 633 aa22.24■■□□□ 1.15
NELFE-202ENST00000375429 EHBP1Q8NDI1 1231 aa22.24■■□□□ 1.15
NELFE-202ENST00000375429 PI4K2AQ9BTU6 479 aa22.24■■□□□ 1.15
NELFE-202ENST00000375429 TRIM5Q9C035 493 aa22.24■■□□□ 1.15
NELFE-202ENST00000375429 GBF1Q92538 1859 aa22.23■■□□□ 1.15
NELFE-202ENST00000375429 SLC9A1P19634 815 aa22.23■■□□□ 1.15
NELFE-202ENST00000375429 RPL9P32969 192 aaKnown RBP22.23■■□□□ 1.15
NELFE-202ENST00000375429 CETN1Q12798 172 aa22.23■■□□□ 1.15
NELFE-202ENST00000375429 DDX27Q96GQ7 796 aaKnown RBP22.23■■□□□ 1.15
NELFE-202ENST00000375429 UTP3Q9NQZ2 479 aaKnown RBP eCLIP22.23■■□□□ 1.153e-9■■■■■ 65.2
NELFE-202ENST00000375429 MRPL42Q9Y6G3 142 aaKnown RBP22.23■■□□□ 1.15
NELFE-202ENST00000375429 PODXLO00592 558 aa22.22■■□□□ 1.15
NELFE-202ENST00000375429 CBFA2T2O43439 604 aa22.22■■□□□ 1.15
NELFE-202ENST00000375429 ZC3H11AO75152 810 aaKnown RBP eCLIP22.22■■□□□ 1.15
NELFE-202ENST00000375429 PON1P27169 355 aa22.22■■□□□ 1.15
NELFE-202ENST00000375429 OR1G1P47890 313 aa22.22■■□□□ 1.15
NELFE-202ENST00000375429 EXOC3L4Q17RC7 722 aa22.22■■□□□ 1.15
NELFE-202ENST00000375429 UROC1Q96N76 676 aa22.22■■□□□ 1.15
NELFE-202ENST00000375429 ERGIC2Q96RQ1 377 aa22.22■■□□□ 1.15
NELFE-202ENST00000375429 XYLT2Q9H1B5 865 aa22.22■■□□□ 1.15
NELFE-202ENST00000375429 GCNT4Q9P109 453 aa22.22■■□□□ 1.15
NELFE-202ENST00000375429 LCHNA4D1U4 455 aa22.21■■□□□ 1.15
NELFE-202ENST00000375429 NRP1O14786 923 aa22.21■■□□□ 1.15
NELFE-202ENST00000375429 ALDH2P05091 517 aa22.21■■□□□ 1.15
NELFE-202ENST00000375429 GALTP07902 379 aa22.21■■□□□ 1.15
NELFE-202ENST00000375429 SLC11A1P49279 550 aa22.21■■□□□ 1.15
NELFE-202ENST00000375429 KLK7P49862 253 aa22.21■■□□□ 1.15
NELFE-202ENST00000375429 BCAR1P56945 870 aa22.21■■□□□ 1.15
NELFE-202ENST00000375429 SYCP1Q15431 976 aa22.21■■□□□ 1.15
NELFE-202ENST00000375429 SGSM1Q2NKQ1 1148 aa22.21■■□□□ 1.15
NELFE-202ENST00000375429 CD300LGQ6UXG3 332 aa22.21■■□□□ 1.15
NELFE-202ENST00000375429 C3orf58Q8NDZ4 430 aa22.21■■□□□ 1.15
NELFE-202ENST00000375429 SP7Q8TDD2 431 aaPredicted RBP22.21■■□□□ 1.15
NELFE-202ENST00000375429 TMEM175Q9BSA9 504 aa22.21■■□□□ 1.15
NELFE-202ENST00000375429 INTS2Q9H0H0 1204 aaKnown RBP22.21■■□□□ 1.15
NELFE-202ENST00000375429 PRO3102Q9H379 93 aa22.21■■□□□ 1.15
NELFE-202ENST00000375429 SIK3Q9Y2K2 1263 aa22.21■■□□□ 1.15
NELFE-202ENST00000375429 R3HCC1Q9Y3T6 440 aaKnown RBP22.21■■□□□ 1.15
NELFE-202ENST00000375429 F8W810 466 aa22.21■■□□□ 1.15
NELFE-202ENST00000375429 ASS1P00966 412 aaKnown RBP22.21■■□□□ 1.15
NELFE-202ENST00000375429 MYOGP15173 224 aa22.21■■□□□ 1.15
NELFE-202ENST00000375429 PBX3P40426 434 aa22.21■■□□□ 1.15
NELFE-202ENST00000375429 APBA1Q02410 837 aa22.21■■□□□ 1.15
NELFE-202ENST00000375429 SPOPLQ6IQ16 392 aa22.21■■□□□ 1.15
NELFE-202ENST00000375429 DPY19L2P1Q6NXN4 242 aa22.21■■□□□ 1.15
NELFE-202ENST00000375429 DCLRE1AQ6PJP8 1040 aa22.21■■□□□ 1.15
NELFE-202ENST00000375429 CHRDL2Q6WN34 429 aa22.21■■□□□ 1.15
NELFE-202ENST00000375429 FIBCD1Q8N539 461 aa22.21■■□□□ 1.15
NELFE-202ENST00000375429 LRRC52Q8N7C0 313 aa22.21■■□□□ 1.15
NELFE-202ENST00000375429 HPDLQ96IR7 371 aa22.21■■□□□ 1.15
NELFE-202ENST00000375429 FAN1Q9Y2M0 1017 aa22.21■■□□□ 1.15
NELFE-202ENST00000375429 KIAA1671Q9BY89 1806 aa22.2■■□□□ 1.15
NELFE-202ENST00000375429 NT5C1B-RDH14C9J2C7 533 aa22.2■■□□□ 1.14
NELFE-202ENST00000375429 SPTLC1O15269 473 aa22.2■■□□□ 1.14
NELFE-202ENST00000375429 B3GAT3O94766 335 aa22.2■■□□□ 1.14
NELFE-202ENST00000375429 ATICP31939 592 aa22.2■■□□□ 1.14
NELFE-202ENST00000375429 PBX1P40424 430 aa22.2■■□□□ 1.14
NELFE-202ENST00000375429 ZNF75DP51815 510 aa22.2■■□□□ 1.14
NELFE-202ENST00000375429 SPOUT1Q5T280 376 aaKnown RBP22.2■■□□□ 1.14
NELFE-202ENST00000375429 TRIM65Q6PJ69 517 aa22.2■■□□□ 1.14
NELFE-202ENST00000375429 TDHQ8IZJ6 230 aa22.2■■□□□ 1.14
NELFE-202ENST00000375429 TATDN2Q93075 761 aa22.2■■□□□ 1.14
NELFE-202ENST00000375429 APOBEC3GQ9HC16 384 aaKnown RBP22.2■■□□□ 1.14
NELFE-202ENST00000375429 PRG3Q9Y2Y8 225 aaPredicted RBP22.2■■□□□ 1.14
NELFE-202ENST00000375429 HSFX4A0A1B0GTS1 333 aaPredicted RBP22.19■■□□□ 1.14
NELFE-202ENST00000375429 HSFX3A0A1B0GWH4 333 aaPredicted RBP22.19■■□□□ 1.14
NELFE-202ENST00000375429 A0A1W2PQC6 194 aa22.19■■□□□ 1.14
NELFE-202ENST00000375429 ITGB1P05556 798 aa22.19■■□□□ 1.14
NELFE-202ENST00000375429 TPM3P06753 285 aa22.19■■□□□ 1.14
NELFE-202ENST00000375429 LINC00271P0C7V0 271 aa22.19■■□□□ 1.14
NELFE-202ENST00000375429 MRE11P49959 708 aa22.19■■□□□ 1.14
NELFE-202ENST00000375429 LILRA4P59901 499 aa22.19■■□□□ 1.14
NELFE-202ENST00000375429 LRMPQ12912 555 aa22.19■■□□□ 1.14
NELFE-202ENST00000375429 ZNF699Q32M78 642 aa22.19■■□□□ 1.14
NELFE-202ENST00000375429 HASPINQ8TF76 798 aa22.19■■□□□ 1.14
NELFE-202ENST00000375429 VRTNQ9H8Y1 702 aa22.19■■□□□ 1.14
NELFE-202ENST00000375429 SIX2Q9NPC8 291 aa22.19■■□□□ 1.14
NELFE-202ENST00000375429 NUB1Q9Y5A7 615 aa22.19■■□□□ 1.14
NELFE-202ENST00000375429 KIF4AO95239 1232 aa22.18■■□□□ 1.14
NELFE-202ENST00000375429 STAU1O95793 577 aaKnown RBP22.18■■□□□ 1.14
NELFE-202ENST00000375429 PNPLA4P41247 253 aa22.18■■□□□ 1.14
NELFE-202ENST00000375429 ALDH7A1P49419 539 aaKnown RBP22.18■■□□□ 1.14
NELFE-202ENST00000375429 TAF6P49848 677 aa22.18■■□□□ 1.14
NELFE-202ENST00000375429 NOP14P78316 857 aaKnown RBP22.18■■□□□ 1.14
NELFE-202ENST00000375429 MYO1EQ12965 1108 aa22.18■■□□□ 1.14
NELFE-202ENST00000375429 WDR44Q5JSH3 913 aa22.18■■□□□ 1.14
NELFE-202ENST00000375429 PHLDB3Q6NSJ2 640 aa22.18■■□□□ 1.14
NELFE-202ENST00000375429 KCNT2Q6UVM3 1135 aa22.18■■□□□ 1.14
NELFE-202ENST00000375429 TAF4BQ92750 862 aa22.18■■□□□ 1.14
NELFE-202ENST00000375429 PCMTD1Q96MG8 357 aaPredicted RBP22.18■■□□□ 1.14
NELFE-202ENST00000375429 ZNF560Q96MR9 790 aa22.18■■□□□ 1.14
NELFE-202ENST00000375429 COLEC11Q9BWP8 271 aa22.18■■□□□ 1.14
NELFE-202ENST00000375429 LSM14BQ9BX40 385 aaKnown RBP22.18■■□□□ 1.14
NELFE-202ENST00000375429 TMEM189-UBE2V1I3L0A0 370 aa22.17■■□□□ 1.14
NELFE-202ENST00000375429 WDR72Q3MJ13 1102 aa22.17■■□□□ 1.14
NELFE-202ENST00000375429 TMEM173Q86WV6 379 aaPredicted RBP22.17■■□□□ 1.14
NELFE-202ENST00000375429 COLGALT1Q8NBJ5 622 aa22.17■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms