RNA–Protein interactions for RNA: ENST00000375315.6

C9orf3-203, Transcript of chromosome 9 open reading frame 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C9orf3, Length 3,136 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-203ENST00000375315 PRPF4BQ13523 1007 aaKnown RBP12.9□□□□□ -0.34
C9orf3-203ENST00000375315 CLUL1Q15846 466 aa12.9□□□□□ -0.34
C9orf3-203ENST00000375315 KHDC1Q4VXA5 237 aaKnown RBP12.9□□□□□ -0.34
C9orf3-203ENST00000375315 TPH2Q8IWU9 490 aa12.9□□□□□ -0.34
C9orf3-203ENST00000375315 SERPINB12Q96P63 405 aa12.9□□□□□ -0.34
C9orf3-203ENST00000375315 ZNF184Q99676 751 aaPredicted RBP12.9□□□□□ -0.34
C9orf3-203ENST00000375315 BCAS3Q9H6U6 928 aa12.9□□□□□ -0.34
C9orf3-203ENST00000375315 RNF146Q9NTX7 359 aa12.9□□□□□ -0.34
C9orf3-203ENST00000375315 PPP1R9AQ9ULJ8 1098 aa12.9□□□□□ -0.34
C9orf3-203ENST00000375315 PAIP2BQ9ULR5 123 aaKnown RBP12.9□□□□□ -0.34
C9orf3-203ENST00000375315 RBM47A0AV96 593 aaKnown RBP12.89□□□□□ -0.35
C9orf3-203ENST00000375315 SFI1A8K8P3 1242 aa12.89□□□□□ -0.35
C9orf3-203ENST00000375315 CAPN9O14815 690 aa12.89□□□□□ -0.35
C9orf3-203ENST00000375315 C4orf50Q6ZRC1 276 aa12.89□□□□□ -0.35
C9orf3-203ENST00000375315 SLFN11Q7Z7L1 901 aa12.89□□□□□ -0.35
C9orf3-203ENST00000375315 NME8Q8N427 588 aa12.89□□□□□ -0.35
C9orf3-203ENST00000375315 STMN2Q93045 179 aa12.89□□□□□ -0.35
C9orf3-203ENST00000375315 LENG1Q96BZ8 264 aaPredicted RBP12.89□□□□□ -0.35
C9orf3-203ENST00000375315 RAB34Q9BZG1 259 aa12.89□□□□□ -0.35
C9orf3-203ENST00000375315 WDR11Q9BZH6 1224 aa12.89□□□□□ -0.35
C9orf3-203ENST00000375315 R3HDMLQ9H3Y0 253 aa12.89□□□□□ -0.35
C9orf3-203ENST00000375315 WDR37Q9Y2I8 494 aa12.89□□□□□ -0.35
C9orf3-203ENST00000375315 STXBP5LQ9Y2K9 1186 aa12.89□□□□□ -0.35
C9orf3-203ENST00000375315 VWA5AO00534 786 aa12.89□□□□□ -0.35
C9orf3-203ENST00000375315 ZNF189O75820 626 aaPredicted RBP12.89□□□□□ -0.35
C9orf3-203ENST00000375315 BRAFP15056 766 aa12.89□□□□□ -0.35
C9orf3-203ENST00000375315 MAP3K10Q02779 954 aa12.89□□□□□ -0.35
C9orf3-203ENST00000375315 MAPK7Q13164 816 aa12.89□□□□□ -0.35
C9orf3-203ENST00000375315 GIT2Q14161 759 aa12.89□□□□□ -0.35
C9orf3-203ENST00000375315 ZC2HC1CQ53FD0 456 aaPredicted RBP12.89□□□□□ -0.35
C9orf3-203ENST00000375315 PPP1R21Q6ZMI0 780 aa12.89□□□□□ -0.35
C9orf3-203ENST00000375315 GLIS3Q8NEA6 775 aa12.89□□□□□ -0.35
C9orf3-203ENST00000375315 GLG1Q92896 1179 aa12.89□□□□□ -0.35
C9orf3-203ENST00000375315 ZNF653Q96CK0 615 aa12.89□□□□□ -0.35
C9orf3-203ENST00000375315 PNMA5Q96PV4 448 aa12.89□□□□□ -0.35
C9orf3-203ENST00000375315 WDR18Q9BV38 432 aa12.89□□□□□ -0.35
C9orf3-203ENST00000375315 NT5C3AQ9H0P0 336 aa12.89□□□□□ -0.35
C9orf3-203ENST00000375315 CHKBQ9Y259 395 aa12.89□□□□□ -0.35
C9orf3-203ENST00000375315 SNCAIPQ9Y6H5 919 aa12.89□□□□□ -0.35
C9orf3-203ENST00000375315 ASLP04424 464 aa12.88□□□□□ -0.35
C9orf3-203ENST00000375315 ZCCHC18P0CG32 403 aa12.88□□□□□ -0.35
C9orf3-203ENST00000375315 ALKBH5Q6P6C2 394 aaKnown RBP12.88□□□□□ -0.35
C9orf3-203ENST00000375315 NT5DC3Q86UY8 548 aa12.88□□□□□ -0.35
C9orf3-203ENST00000375315 ST13P4Q8IZP2 240 aaPredicted RBP12.88□□□□□ -0.35
C9orf3-203ENST00000375315 GUF1Q8N442 669 aaKnown RBP12.88□□□□□ -0.35
C9orf3-203ENST00000375315 DDX55Q8NHQ9 600 aaKnown RBP eCLIP12.88□□□□□ -0.35
C9orf3-203ENST00000375315 HES6Q96HZ4 224 aa12.88□□□□□ -0.35
C9orf3-203ENST00000375315 SLX1AQ9BQ83 275 aa12.88□□□□□ -0.35
C9orf3-203ENST00000375315 ASCC2Q9H1I8 757 aaPredicted RBP12.88□□□□□ -0.35
C9orf3-203ENST00000375315 SLTMQ9NWH9 1034 aaKnown RBP eCLIP12.88□□□□□ -0.35
C9orf3-203ENST00000375315 ARMCX3Q9UH62 379 aaPredicted RBP12.88□□□□□ -0.35
C9orf3-203ENST00000375315 CHMP2BQ9UQN3 213 aa12.88□□□□□ -0.35
C9orf3-203ENST00000375315 MED24O75448 989 aa12.88□□□□□ -0.35
C9orf3-203ENST00000375315 ICAM1P05362 532 aa12.88□□□□□ -0.35
C9orf3-203ENST00000375315 CDK7P50613 346 aa12.88□□□□□ -0.35
C9orf3-203ENST00000375315 IL9RQ01113 521 aa12.88□□□□□ -0.35
C9orf3-203ENST00000375315 CDR2Q01850 454 aa12.88□□□□□ -0.35
C9orf3-203ENST00000375315 CBX3Q13185 183 aa12.88□□□□□ -0.35
C9orf3-203ENST00000375315 LONRF1Q17RB8 773 aa12.88□□□□□ -0.35
C9orf3-203ENST00000375315 RNF207Q6ZRF8 634 aa12.88□□□□□ -0.35
C9orf3-203ENST00000375315 FAM47EQ6ZV65 393 aa12.88□□□□□ -0.35
C9orf3-203ENST00000375315 SV2BQ7L1I2 683 aa12.88□□□□□ -0.35
C9orf3-203ENST00000375315 NELFCDQ8IXH7 590 aa12.88□□□□□ -0.35
C9orf3-203ENST00000375315 LPAR1Q92633 364 aa12.88□□□□□ -0.35
C9orf3-203ENST00000375315 RMDN3Q96TC7 470 aa12.88□□□□□ -0.35
C9orf3-203ENST00000375315 TLE6Q9H808 572 aa12.88□□□□□ -0.35
C9orf3-203ENST00000375315 STARD13Q9Y3M8 1113 aa12.88□□□□□ -0.35
C9orf3-203ENST00000375315 hCG_2014768A0A024R1R8 64 aa12.88□□□□□ -0.35
C9orf3-203ENST00000375315 A0A0A6YYK5 440 aaPredicted RBP12.88□□□□□ -0.35
C9orf3-203ENST00000375315 GLTPD2A6NH11 291 aa12.88□□□□□ -0.35
C9orf3-203ENST00000375315 EML1O00423 815 aa12.88□□□□□ -0.35
C9orf3-203ENST00000375315 ITGA2BP08514 1039 aa12.88□□□□□ -0.35
C9orf3-203ENST00000375315 H2AFZP0C0S5 128 aa12.88□□□□□ -0.35
C9orf3-203ENST00000375315 KRT13P13646 458 aa12.88□□□□□ -0.35
C9orf3-203ENST00000375315 RTP1P59025 263 aa12.88□□□□□ -0.35
C9orf3-203ENST00000375315 TMEM62Q0P6H9 643 aa12.88□□□□□ -0.35
C9orf3-203ENST00000375315 COG2Q14746 738 aa12.88□□□□□ -0.35
C9orf3-203ENST00000375315 PHLDB3Q6NSJ2 640 aa12.88□□□□□ -0.35
C9orf3-203ENST00000375315 LRRC55Q6ZSA7 311 aa12.88□□□□□ -0.35
C9orf3-203ENST00000375315 H2AFVQ71UI9 128 aa12.88□□□□□ -0.35
C9orf3-203ENST00000375315 ZBTB8BQ8NAP8 495 aaPredicted RBP12.88□□□□□ -0.35
C9orf3-203ENST00000375315 NRG4Q8WWG1 115 aa12.88□□□□□ -0.35
C9orf3-203ENST00000375315 LARP4BQ92615 738 aaKnown RBP12.88□□□□□ -0.35
C9orf3-203ENST00000375315 DDX50Q9BQ39 737 aaKnown RBP12.88□□□□□ -0.35
C9orf3-203ENST00000375315 ZNF212Q9UDV6 495 aa12.88□□□□□ -0.35
C9orf3-203ENST00000375315 MYMKA6NI61 221 aa12.87□□□□□ -0.35
C9orf3-203ENST00000375315 PODXLO00592 558 aa12.87□□□□□ -0.35
C9orf3-203ENST00000375315 CYP1A1P04798 512 aaPredicted RBP12.87□□□□□ -0.35
C9orf3-203ENST00000375315 HNRNPCP07910 306 aaKnown RBP eCLIP12.87□□□□□ -0.355e-8■■□□□ 13.5
C9orf3-203ENST00000375315 CCNFP41002 786 aa12.87□□□□□ -0.35
C9orf3-203ENST00000375315 NPEPPSP55786 919 aa12.87□□□□□ -0.35
C9orf3-203ENST00000375315 TMEM132BQ14DG7 1078 aa12.87□□□□□ -0.35
C9orf3-203ENST00000375315 SPDYAQ5MJ70 313 aa12.87□□□□□ -0.35
C9orf3-203ENST00000375315 ARHGEF16Q5VV41 709 aa12.87□□□□□ -0.35
C9orf3-203ENST00000375315 DAB2IPQ5VWQ8 1189 aa12.87□□□□□ -0.35
C9orf3-203ENST00000375315 MARK2Q7KZI7 788 aaKnown RBP12.87□□□□□ -0.35
C9orf3-203ENST00000375315 TRMT10CQ7L0Y3 403 aaKnown RBP12.87□□□□□ -0.35
C9orf3-203ENST00000375315 VPS36Q86VN1 386 aa12.87□□□□□ -0.35
C9orf3-203ENST00000375315 CTNNBL1Q8WYA6 563 aaPredicted RBP12.87□□□□□ -0.35
C9orf3-203ENST00000375315 AK8Q96MA6 479 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms