RNA–Protein interactions for RNA: ENST00000375254.7

UBR4-204, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBR4, Length 15,906 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-204ENST00000375254 MAPK6Q16659 721 aa6.93□□□□□ -1.3
UBR4-204ENST00000375254 PNPT1Q8TCS8 783 aaKnown RBP6.93□□□□□ -1.3
UBR4-204ENST00000375254 PNPLA3Q9NST1 481 aa6.93□□□□□ -1.3
UBR4-204ENST00000375254 HEY2Q9UBP5 337 aa6.93□□□□□ -1.3
UBR4-204ENST00000375254 COQ9O75208 318 aa6.92□□□□□ -1.3
UBR4-204ENST00000375254 TYK2P29597 1187 aa6.92□□□□□ -1.3
UBR4-204ENST00000375254 SLC9A3P48764 834 aa6.92□□□□□ -1.3
UBR4-204ENST00000375254 SURF1Q15526 300 aa6.92□□□□□ -1.3
UBR4-204ENST00000375254 ZNF662Q6ZS27 426 aa6.92□□□□□ -1.3
UBR4-204ENST00000375254 CIDECQ96AQ7 238 aaPredicted RBP6.92□□□□□ -1.3
UBR4-204ENST00000375254 STK33Q9BYT3 514 aa6.92□□□□□ -1.3
UBR4-204ENST00000375254 CBY1Q9Y3M2 126 aa6.92□□□□□ -1.3
UBR4-204ENST00000375254 ACTL7BQ9Y614 415 aa6.92□□□□□ -1.3
UBR4-204ENST00000375254 STX11O75558 287 aa6.92□□□□□ -1.3
UBR4-204ENST00000375254 TSGA10IPQ3SY00 556 aa6.92□□□□□ -1.3
UBR4-204ENST00000375254 ZIM3Q96PE6 472 aa6.92□□□□□ -1.3
UBR4-204ENST00000375254 SLC13A1Q9BZW2 595 aa6.92□□□□□ -1.3
UBR4-204ENST00000375254 STN1Q9H668 368 aaKnown RBP6.92□□□□□ -1.3
UBR4-204ENST00000375254 GSTK1Q9Y2Q3 226 aa6.92□□□□□ -1.3
UBR4-204ENST00000375254 LEMD3Q9Y2U8 911 aa6.92□□□□□ -1.3
UBR4-204ENST00000375254 CLDN25C9JDP6 229 aa6.92□□□□□ -1.3
UBR4-204ENST00000375254 ATF4P18848 351 aaPredicted RBP6.92□□□□□ -1.3
UBR4-204ENST00000375254 GEMIN4P57678 1058 aaKnown RBP6.92□□□□□ -1.3
UBR4-204ENST00000375254 RASA2Q15283 850 aa6.92□□□□□ -1.3
UBR4-204ENST00000375254 ARHGAP17Q68EM7 881 aa6.92□□□□□ -1.3
UBR4-204ENST00000375254 LRRC34Q8IZ02 419 aa6.92□□□□□ -1.3
UBR4-204ENST00000375254 TTC29Q8NA56 475 aaPredicted RBP6.92□□□□□ -1.3
UBR4-204ENST00000375254 ARL8AQ96BM9 186 aa6.92□□□□□ -1.3
UBR4-204ENST00000375254 SLC24A2Q9UI40 661 aa6.92□□□□□ -1.3
UBR4-204ENST00000375254 LOC110117498-PIK3R3F6TDL0 507 aa6.92□□□□□ -1.3
UBR4-204ENST00000375254 TTLL1O95922 423 aa6.92□□□□□ -1.3
UBR4-204ENST00000375254 PEPDP12955 493 aa6.92□□□□□ -1.3
UBR4-204ENST00000375254 CYP7A1P22680 504 aa6.92□□□□□ -1.3
UBR4-204ENST00000375254 ACLYP53396 1101 aa6.92□□□□□ -1.3
UBR4-204ENST00000375254 S100A12P80511 92 aa6.92□□□□□ -1.3
UBR4-204ENST00000375254 FAM26FQ5R3K3 315 aa6.92□□□□□ -1.3
UBR4-204ENST00000375254 NEK5Q6P3R8 708 aa6.92□□□□□ -1.3
UBR4-204ENST00000375254 CYP2U1Q7Z449 544 aa6.92□□□□□ -1.3
UBR4-204ENST00000375254 NAT14Q8WUY8 206 aa6.92□□□□□ -1.3
UBR4-204ENST00000375254 PIK3R3Q92569 461 aa6.92□□□□□ -1.3
UBR4-204ENST00000375254 KCNA1Q09470 495 aa6.92□□□□□ -1.3
UBR4-204ENST00000375254 ABRAXAS1Q6UWZ7 409 aa6.92□□□□□ -1.3
UBR4-204ENST00000375254 SLC30A5Q8TAD4 765 aa6.92□□□□□ -1.3
UBR4-204ENST00000375254 UBXN6Q9BZV1 441 aa6.92□□□□□ -1.3
UBR4-204ENST00000375254 PARD3Q8TEW0 1356 aa6.92□□□□□ -1.3
UBR4-204ENST00000375254 USP11P51784 963 aa6.92□□□□□ -1.3
UBR4-204ENST00000375254 EIF3MQ7L2H7 374 aaKnown RBP6.92□□□□□ -1.3
UBR4-204ENST00000375254 STRA8Q7Z7C7 330 aa6.92□□□□□ -1.3
UBR4-204ENST00000375254 TTC8Q8TAM2 541 aa6.92□□□□□ -1.3
UBR4-204ENST00000375254 TNNQ9UQP3 1299 aa6.92□□□□□ -1.3
UBR4-204ENST00000375254 PCSK2P16519 638 aa6.92□□□□□ -1.3
UBR4-204ENST00000375254 TARSP26639 723 aaKnown RBP6.92□□□□□ -1.3
UBR4-204ENST00000375254 QPRTQ15274 297 aa6.92□□□□□ -1.3
UBR4-204ENST00000375254 SPOPLQ6IQ16 392 aa6.92□□□□□ -1.3
UBR4-204ENST00000375254 RAB43Q86YS6 212 aa6.92□□□□□ -1.3
UBR4-204ENST00000375254 MMS19Q96T76 1030 aa6.92□□□□□ -1.3
UBR4-204ENST00000375254 EPAS1Q99814 870 aa6.92□□□□□ -1.3
UBR4-204ENST00000375254 SERHL2Q9H4I8 314 aa6.92□□□□□ -1.3
UBR4-204ENST00000375254 SERHLQ9NQF3 203 aa6.92□□□□□ -1.3
UBR4-204ENST00000375254 RGL2O15211 777 aa6.92□□□□□ -1.3
UBR4-204ENST00000375254 COG2Q14746 738 aa6.92□□□□□ -1.3
UBR4-204ENST00000375254 FAM83BQ5T0W9 1011 aa6.92□□□□□ -1.3
UBR4-204ENST00000375254 FAM118BQ9BPY3 351 aa6.92□□□□□ -1.3
UBR4-204ENST00000375254 KCNK4Q9NYG8 393 aa6.92□□□□□ -1.3
UBR4-204ENST00000375254 AKAP7Q9P0M2 348 aaPredicted RBP6.92□□□□□ -1.3
UBR4-204ENST00000375254 HIRAP54198 1017 aaPredicted RBP6.92□□□□□ -1.3
UBR4-204ENST00000375254 NCKAP1LP55160 1127 aa6.92□□□□□ -1.3
UBR4-204ENST00000375254 V9GYQ6 96 aa6.92□□□□□ -1.3
UBR4-204ENST00000375254 KCNK1O00180 336 aa6.92□□□□□ -1.3
UBR4-204ENST00000375254 LDHAP00338 332 aaKnown RBP6.92□□□□□ -1.3
UBR4-204ENST00000375254 LAYNQ6UX15 382 aa6.92□□□□□ -1.3
UBR4-204ENST00000375254 RASSF6Q6ZTQ3 369 aa6.92□□□□□ -1.3
UBR4-204ENST00000375254 MREGQ8N565 214 aa6.92□□□□□ -1.3
UBR4-204ENST00000375254 LEMD2Q8NC56 503 aa6.92□□□□□ -1.3
UBR4-204ENST00000375254 ANKS1AQ92625 1134 aa6.92□□□□□ -1.3
UBR4-204ENST00000375254 FAM135BQ49AJ0 1406 aa6.92□□□□□ -1.3
UBR4-204ENST00000375254 MAP3K19Q56UN5 1328 aa6.92□□□□□ -1.3
UBR4-204ENST00000375254 RWDD4Q6NW29 188 aaKnown RBP6.92□□□□□ -1.3
UBR4-204ENST00000375254 RFX8Q6ZV50 586 aa6.92□□□□□ -1.3
UBR4-204ENST00000375254 PHTF1Q9UMS5 762 aa6.92□□□□□ -1.3
UBR4-204ENST00000375254 DPPA5A6NC42 116 aa6.92□□□□□ -1.3
UBR4-204ENST00000375254 ASMTLO95671 621 aa6.92□□□□□ -1.3
UBR4-204ENST00000375254 CYP2E1P05181 493 aaPredicted RBP6.92□□□□□ -1.3
UBR4-204ENST00000375254 RAD23AP54725 363 aa6.92□□□□□ -1.3
UBR4-204ENST00000375254 MECOMQ03112 1051 aa6.92□□□□□ -1.3
UBR4-204ENST00000375254 GARNL3Q5VVW2 1013 aa6.92□□□□□ -1.3
UBR4-204ENST00000375254 ZNF544Q6NX49 715 aa6.92□□□□□ -1.3
UBR4-204ENST00000375254 COPS6Q7L5N1 327 aa6.92□□□□□ -1.3
UBR4-204ENST00000375254 RHPN2Q8IUC4 686 aa6.92□□□□□ -1.3
UBR4-204ENST00000375254 IP6K2Q9UHH9 426 aa6.92□□□□□ -1.3
UBR4-204ENST00000375254 GON4LQ3T8J9 2241 aa6.92□□□□□ -1.3
UBR4-204ENST00000375254 VAC14Q08AM6 782 aa6.92□□□□□ -1.3
UBR4-204ENST00000375254 TTC23Q5W5X9 447 aa6.92□□□□□ -1.3
UBR4-204ENST00000375254 RFFLQ8WZ73 363 aa6.92□□□□□ -1.3
UBR4-204ENST00000375254 NEU2Q9Y3R4 380 aa6.92□□□□□ -1.3
UBR4-204ENST00000375254 ERICH3Q5RHP9 1530 aa6.91□□□□□ -1.3
UBR4-204ENST00000375254 NOL4O94818 638 aa6.91□□□□□ -1.3
UBR4-204ENST00000375254 KRT19P08727 400 aa6.91□□□□□ -1.3
UBR4-204ENST00000375254 POLR2MP0CAP2 368 aa6.91□□□□□ -1.3
UBR4-204ENST00000375254 ITIH1P19827 911 aa6.91□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms