RNA–Protein interactions for RNA: ENST00000374747.9

NPLOC4-202, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 2 BASIC

Gene NPLOC4, Length 5,538 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-202ENST00000374747 HIF1AQ16665 826 aa12.93□□□□□ -0.34
NPLOC4-202ENST00000374747 KIAA1755Q5JYT7 1200 aa12.93□□□□□ -0.34
NPLOC4-202ENST00000374747 ADSSL1Q8N142 457 aa12.93□□□□□ -0.34
NPLOC4-202ENST00000374747 GMCL1P1Q8NEA9 526 aa12.93□□□□□ -0.34
NPLOC4-202ENST00000374747 MXRA8Q9BRK3 442 aa12.93□□□□□ -0.34
NPLOC4-202ENST00000374747 MRPS15P82914 257 aaKnown RBP12.93□□□□□ -0.34
NPLOC4-202ENST00000374747 KCNA1Q09470 495 aa12.93□□□□□ -0.34
NPLOC4-202ENST00000374747 HAUS6Q7Z4H7 955 aa12.93□□□□□ -0.34
NPLOC4-202ENST00000374747 FRMD5Q7Z6J6 570 aa12.93□□□□□ -0.34
NPLOC4-202ENST00000374747 CATSPER3Q86XQ3 398 aa12.93□□□□□ -0.34
NPLOC4-202ENST00000374747 TOPORSQ9NS56 1045 aaPredicted RBP12.93□□□□□ -0.34
NPLOC4-202ENST00000374747 CCND1P24385 295 aa12.92□□□□□ -0.34
NPLOC4-202ENST00000374747 STAT5BP51692 787 aa12.92□□□□□ -0.34
NPLOC4-202ENST00000374747 ARPP19P56211 112 aa12.92□□□□□ -0.34
NPLOC4-202ENST00000374747 PRAMEF18Q5VWM3 479 aa12.92□□□□□ -0.34
NPLOC4-202ENST00000374747 PBXIP1Q96AQ6 731 aa12.92□□□□□ -0.34
NPLOC4-202ENST00000374747 ARL8AQ96BM9 186 aa12.92□□□□□ -0.34
NPLOC4-202ENST00000374747 FAM213AQ9BRX8 229 aa12.92□□□□□ -0.34
NPLOC4-202ENST00000374747 DGAT1O75907 488 aa12.92□□□□□ -0.34
NPLOC4-202ENST00000374747 TMCC1O94876 653 aa12.92□□□□□ -0.34
NPLOC4-202ENST00000374747 HLA-DPA1P20036 260 aa12.92□□□□□ -0.34
NPLOC4-202ENST00000374747 ARSEP51690 589 aa12.92□□□□□ -0.34
NPLOC4-202ENST00000374747 MAP3K10Q02779 954 aa12.92□□□□□ -0.34
NPLOC4-202ENST00000374747 KDSRQ06136 332 aa12.92□□□□□ -0.34
NPLOC4-202ENST00000374747 NBPF20Q3BBV1 942 aa12.92□□□□□ -0.34
NPLOC4-202ENST00000374747 ITPRIPL1Q6GPH6 555 aa12.92□□□□□ -0.34
NPLOC4-202ENST00000374747 CCNI2Q6ZMN8 369 aaPredicted RBP12.92□□□□□ -0.34
NPLOC4-202ENST00000374747 IFT43Q96FT9 208 aa12.92□□□□□ -0.34
NPLOC4-202ENST00000374747 MRPL4Q9BYD3 311 aaKnown RBP12.92□□□□□ -0.34
NPLOC4-202ENST00000374747 PSD3Q9NYI0 1048 aa12.92□□□□□ -0.34
NPLOC4-202ENST00000374747 GGT7Q9UJ14 662 aa12.92□□□□□ -0.34
NPLOC4-202ENST00000374747 A0A1B0GTH6 734 aa12.92□□□□□ -0.34
NPLOC4-202ENST00000374747 H0Y626 953 aa12.92□□□□□ -0.34
NPLOC4-202ENST00000374747 TRIM16O95361 564 aa12.92□□□□□ -0.34
NPLOC4-202ENST00000374747 ICAM1P05362 532 aa12.92□□□□□ -0.34
NPLOC4-202ENST00000374747 ENO1P06733 434 aaKnown RBP12.92□□□□□ -0.34
NPLOC4-202ENST00000374747 KCNA3P22001 575 aa12.92□□□□□ -0.34
NPLOC4-202ENST00000374747 ZNF568Q3ZCX4 644 aa12.92□□□□□ -0.34
NPLOC4-202ENST00000374747 LONP2Q86WA8 852 aa12.92□□□□□ -0.34
NPLOC4-202ENST00000374747 ATL2Q8NHH9 583 aa12.92□□□□□ -0.34
NPLOC4-202ENST00000374747 DTX3LQ8TDB6 740 aa12.92□□□□□ -0.34
NPLOC4-202ENST00000374747 DPF2Q92785 391 aa12.92□□□□□ -0.34
NPLOC4-202ENST00000374747 POLD4Q9HCU8 107 aa12.92□□□□□ -0.34
NPLOC4-202ENST00000374747 PKD2L2Q9NZM6 624 aa12.92□□□□□ -0.34
NPLOC4-202ENST00000374747 ZNF212Q9UDV6 495 aa12.92□□□□□ -0.34
NPLOC4-202ENST00000374747 LRFN2Q9ULH4 789 aa12.92□□□□□ -0.34
NPLOC4-202ENST00000374747 HPCAL4Q9UM19 191 aa12.92□□□□□ -0.34
NPLOC4-202ENST00000374747 SLC8A2Q9UPR5 921 aa12.92□□□□□ -0.34
NPLOC4-202ENST00000374747 CDH16O75309 829 aa12.92□□□□□ -0.34
NPLOC4-202ENST00000374747 AGBL2Q5U5Z8 902 aa12.92□□□□□ -0.34
NPLOC4-202ENST00000374747 RASGRP2Q7LDG7 609 aa12.92□□□□□ -0.34
NPLOC4-202ENST00000374747 RANBP17Q9H2T7 1088 aaKnown RBP12.92□□□□□ -0.34
NPLOC4-202ENST00000374747 TMX2Q9Y320 296 aa12.92□□□□□ -0.34
NPLOC4-202ENST00000374747 DDTLA6NHG4 134 aaPredicted RBP12.91□□□□□ -0.34
NPLOC4-202ENST00000374747 ZNF185O15231 689 aa12.91□□□□□ -0.34
NPLOC4-202ENST00000374747 TXNP10599 105 aaKnown RBP12.91□□□□□ -0.34
NPLOC4-202ENST00000374747 EFNA5P52803 228 aa12.91□□□□□ -0.34
NPLOC4-202ENST00000374747 ALDH18A1P54886 795 aaKnown RBP12.91□□□□□ -0.34
NPLOC4-202ENST00000374747 LRRN4CLQ8ND94 238 aa12.91□□□□□ -0.34
NPLOC4-202ENST00000374747 XPO6Q96QU8 1125 aaKnown RBP12.91□□□□□ -0.34
NPLOC4-202ENST00000374747 PARK7Q99497 189 aaKnown RBP12.91□□□□□ -0.34
NPLOC4-202ENST00000374747 IRX2Q9BZI1 471 aaPredicted RBP12.91□□□□□ -0.34
NPLOC4-202ENST00000374747 IRAK4Q9NWZ3 460 aa12.91□□□□□ -0.34
NPLOC4-202ENST00000374747 PPP2R3BQ9Y5P8 575 aa12.91□□□□□ -0.34
NPLOC4-202ENST00000374747 RPA1P27694 616 aa12.91□□□□□ -0.34
NPLOC4-202ENST00000374747 INPP5AQ14642 412 aa12.91□□□□□ -0.34
NPLOC4-202ENST00000374747 NTRK3Q16288 839 aa12.91□□□□□ -0.34
NPLOC4-202ENST00000374747 ANKRD40Q6AI12 368 aa12.91□□□□□ -0.34
NPLOC4-202ENST00000374747 MOXD1Q6UVY6 613 aa12.91□□□□□ -0.34
NPLOC4-202ENST00000374747 USP49Q70CQ1 688 aa12.91□□□□□ -0.34
NPLOC4-202ENST00000374747 SAMD3Q8N6K7 520 aa12.91□□□□□ -0.34
NPLOC4-202ENST00000374747 SGSM3Q96HU1 749 aa12.91□□□□□ -0.34
NPLOC4-202ENST00000374747 SEC16BQ96JE7 1060 aa12.91□□□□□ -0.34
NPLOC4-202ENST00000374747 MAP3K20Q9NYL2 800 aaKnown RBP12.91□□□□□ -0.34
NPLOC4-202ENST00000374747 STAP1Q9ULZ2 295 aa12.91□□□□□ -0.34
NPLOC4-202ENST00000374747 RIC1Q4ADV7 1423 aa12.91□□□□□ -0.34
NPLOC4-202ENST00000374747 SMIM22K7EJ46 135 aa12.91□□□□□ -0.34
NPLOC4-202ENST00000374747 M0QYV0 167 aa12.91□□□□□ -0.34
NPLOC4-202ENST00000374747 KIAA0391O15091 583 aaKnown RBP12.91□□□□□ -0.34
NPLOC4-202ENST00000374747 ESRRBO95718 433 aa12.91□□□□□ -0.34
NPLOC4-202ENST00000374747 CCDC159P0C7I6 412 aa12.91□□□□□ -0.34
NPLOC4-202ENST00000374747 HOXD10P28358 340 aa12.91□□□□□ -0.34
NPLOC4-202ENST00000374747 TAP1Q03518 808 aa12.91□□□□□ -0.34
NPLOC4-202ENST00000374747 MFSD14CQ5VZR4 134 aa12.91□□□□□ -0.34
NPLOC4-202ENST00000374747 KIAA1841Q6NSI8 718 aa12.91□□□□□ -0.34
NPLOC4-202ENST00000374747 RHPN2Q8IUC4 686 aa12.91□□□□□ -0.34
NPLOC4-202ENST00000374747 ACER1Q8TDN7 264 aa12.91□□□□□ -0.34
NPLOC4-202ENST00000374747 ATG4CQ96DT6 458 aa12.91□□□□□ -0.34
NPLOC4-202ENST00000374747 AGBL1Q96MI9 1066 aa12.91□□□□□ -0.34
NPLOC4-202ENST00000374747 ADARB2Q9NS39 739 aaKnown RBP12.91□□□□□ -0.34
NPLOC4-202ENST00000374747 ITIH6Q6UXX5 1313 aa12.91□□□□□ -0.34
NPLOC4-202ENST00000374747 CHD2O14647 1828 aaKnown RBP12.91□□□□□ -0.34
NPLOC4-202ENST00000374747 MAP4P27816 1152 aaKnown RBP12.91□□□□□ -0.34
NPLOC4-202ENST00000374747 SLC1A1P43005 524 aa12.91□□□□□ -0.34
NPLOC4-202ENST00000374747 FASTKD1Q53R41 847 aaKnown RBP12.91□□□□□ -0.34
NPLOC4-202ENST00000374747 LRRC8BQ6P9F7 803 aa12.91□□□□□ -0.34
NPLOC4-202ENST00000374747 TSSK1BQ9BXA7 367 aa12.91□□□□□ -0.34
NPLOC4-202ENST00000374747 PAIP2BQ9ULR5 123 aaKnown RBP12.91□□□□□ -0.34
NPLOC4-202ENST00000374747 SATB2Q9UPW6 733 aa12.91□□□□□ -0.34
NPLOC4-202ENST00000374747 LZTS1Q9Y250 596 aa12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms