RNA–Protein interactions for RNA: ENST00000374180.3

HDHD3-202, Transcript of haloacid dehalogenase like hydrolase domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDHD3, Length 1,497 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDHD3-202ENST00000374180 CLDND1Q9NY35 253 aa17.28■□□□□ 0.36
HDHD3-202ENST00000374180 COG5Q9UP83 839 aa17.28■□□□□ 0.36
HDHD3-202ENST00000374180 ANO9A1A5B4 782 aa17.27■□□□□ 0.36
HDHD3-202ENST00000374180 PSMA7O14818 248 aa17.27■□□□□ 0.36
HDHD3-202ENST00000374180 CNPP09543 421 aaKnown RBP17.27■□□□□ 0.36
HDHD3-202ENST00000374180 TMEM191BP0C7N4 346 aa17.27■□□□□ 0.36
HDHD3-202ENST00000374180 TNNI1P19237 187 aa17.27■□□□□ 0.36
HDHD3-202ENST00000374180 CASP4P49662 377 aa17.27■□□□□ 0.36
HDHD3-202ENST00000374180 ADAM15Q13444 863 aa17.27■□□□□ 0.36
HDHD3-202ENST00000374180 ZCWPW2Q504Y3 356 aa17.27■□□□□ 0.36
HDHD3-202ENST00000374180 RTP2Q5QGT7 225 aa17.27■□□□□ 0.36
HDHD3-202ENST00000374180 LMBRD2Q68DH5 695 aaPredicted RBP17.27■□□□□ 0.36
HDHD3-202ENST00000374180 PDZRN4Q6ZMN7 1036 aaPredicted RBP17.27■□□□□ 0.36
HDHD3-202ENST00000374180 EFHBQ8N7U6 833 aa17.27■□□□□ 0.36
HDHD3-202ENST00000374180 TRIML1Q8N9V2 468 aa17.27■□□□□ 0.36
HDHD3-202ENST00000374180 PABPC5Q96DU9 382 aaKnown RBP17.27■□□□□ 0.36
HDHD3-202ENST00000374180 DHTKD1Q96HY7 919 aaPredicted RBP17.27■□□□□ 0.36
HDHD3-202ENST00000374180 ANKRD36BP1Q96IX9 119 aa17.27■□□□□ 0.36
HDHD3-202ENST00000374180 SUSD3Q96L08 255 aa17.27■□□□□ 0.36
HDHD3-202ENST00000374180 INTS13Q9NVM9 706 aa17.27■□□□□ 0.36
HDHD3-202ENST00000374180 UNC80Q8N2C7 3258 aa17.27■□□□□ 0.36
HDHD3-202ENST00000374180 PDCD11Q14690 1871 aaKnown RBP17.27■□□□□ 0.36
HDHD3-202ENST00000374180 PIRO00625 290 aa17.26■□□□□ 0.35
HDHD3-202ENST00000374180 PPEF2O14830 753 aa17.26■□□□□ 0.35
HDHD3-202ENST00000374180 TNNC2P02585 160 aa17.26■□□□□ 0.35
HDHD3-202ENST00000374180 FGFR3P22607 806 aa17.26■□□□□ 0.35
HDHD3-202ENST00000374180 PAX3P23760 479 aa17.26■□□□□ 0.35
HDHD3-202ENST00000374180 KLRC2P26717 231 aa17.26■□□□□ 0.35
HDHD3-202ENST00000374180 LILRA4P59901 499 aa17.26■□□□□ 0.35
HDHD3-202ENST00000374180 COL19A1Q14993 1142 aa17.26■□□□□ 0.35
HDHD3-202ENST00000374180 CTC1Q2NKJ3 1217 aa17.26■□□□□ 0.35
HDHD3-202ENST00000374180 PDXDC1Q6P996 788 aa17.26■□□□□ 0.35
HDHD3-202ENST00000374180 WDR49Q8IV35 697 aa17.26■□□□□ 0.35
HDHD3-202ENST00000374180 CSGALNACT2Q8N6G5 542 aa17.26■□□□□ 0.35
HDHD3-202ENST00000374180 KLHL5Q96PQ7 755 aa17.26■□□□□ 0.35
HDHD3-202ENST00000374180 POP1Q99575 1024 aaKnown RBP17.26■□□□□ 0.35
HDHD3-202ENST00000374180 MTMR12Q9C0I1 747 aa17.26■□□□□ 0.35
HDHD3-202ENST00000374180 UBE2ZQ9H832 354 aaPredicted RBP17.26■□□□□ 0.35
HDHD3-202ENST00000374180 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP17.26■□□□□ 0.35
HDHD3-202ENST00000374180 R3HCC1Q9Y3T6 440 aaKnown RBP17.26■□□□□ 0.35
HDHD3-202ENST00000374180 ANK1P16157 1881 aa17.26■□□□□ 0.35
HDHD3-202ENST00000374180 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP17.25■□□□□ 0.35
HDHD3-202ENST00000374180 PPP1R3GB7ZBB8 358 aa17.25■□□□□ 0.35
HDHD3-202ENST00000374180 CETN3O15182 167 aa17.25■□□□□ 0.35
HDHD3-202ENST00000374180 LINC01565O15544 149 aa17.25■□□□□ 0.35
HDHD3-202ENST00000374180 CLASP2O75122 1294 aaKnown RBP17.25■□□□□ 0.35
HDHD3-202ENST00000374180 MBD3O95983 291 aa17.25■□□□□ 0.35
HDHD3-202ENST00000374180 ITGB3P05106 788 aa17.25■□□□□ 0.35
HDHD3-202ENST00000374180 CD44P16070 742 aaKnown RBP17.25■□□□□ 0.35
HDHD3-202ENST00000374180 TKTP29401 623 aaKnown RBP17.25■□□□□ 0.35
HDHD3-202ENST00000374180 CREMQ03060 361 aa17.25■□□□□ 0.35
HDHD3-202ENST00000374180 LRRC63Q05C16 580 aa17.25■□□□□ 0.35
HDHD3-202ENST00000374180 ANKRD40Q6AI12 368 aa17.25■□□□□ 0.35
HDHD3-202ENST00000374180 KLHL10Q6JEL2 608 aa17.25■□□□□ 0.35
HDHD3-202ENST00000374180 PRSS55Q6UWB4 352 aaPredicted RBP17.25■□□□□ 0.35
HDHD3-202ENST00000374180 DSTYKQ6XUX3 929 aa17.25■□□□□ 0.35
HDHD3-202ENST00000374180 C1orf127Q8N9H9 656 aa17.25■□□□□ 0.35
HDHD3-202ENST00000374180 OR5B17Q8NGF7 314 aa17.25■□□□□ 0.35
HDHD3-202ENST00000374180 LNX1Q8TBB1 728 aaPredicted RBP17.25■□□□□ 0.35
HDHD3-202ENST00000374180 PARD3BQ8TEW8 1205 aa17.25■□□□□ 0.35
HDHD3-202ENST00000374180 PIK3R5Q8WYR1 880 aa17.25■□□□□ 0.35
HDHD3-202ENST00000374180 FAM84AQ96KN4 292 aa17.25■□□□□ 0.35
HDHD3-202ENST00000374180 CGRRF1Q99675 332 aa17.25■□□□□ 0.35
HDHD3-202ENST00000374180 RXFP1Q9HBX9 757 aa17.25■□□□□ 0.35
HDHD3-202ENST00000374180 FNIP2Q9P278 1114 aa17.25■□□□□ 0.35
HDHD3-202ENST00000374180 ITGA11Q9UKX5 1188 aa17.25■□□□□ 0.35
HDHD3-202ENST00000374180 AGAP1Q9UPQ3 857 aa17.25■□□□□ 0.35
HDHD3-202ENST00000374180 PTPRJQ12913 1337 aa17.25■□□□□ 0.35
HDHD3-202ENST00000374180 ATG2AQ2TAZ0 1938 aa17.25■□□□□ 0.35
HDHD3-202ENST00000374180 SYN3O14994 580 aa17.24■□□□□ 0.35
HDHD3-202ENST00000374180 MAPK13O15264 365 aa17.24■□□□□ 0.35
HDHD3-202ENST00000374180 TEX28O15482 410 aa17.24■□□□□ 0.35
HDHD3-202ENST00000374180 AKAP3O75969 853 aa17.24■□□□□ 0.35
HDHD3-202ENST00000374180 ADH1AP07327 375 aa17.24■□□□□ 0.35
HDHD3-202ENST00000374180 KRT19P08727 400 aa17.24■□□□□ 0.35
HDHD3-202ENST00000374180 KCNA5P22460 613 aa17.24■□□□□ 0.35
HDHD3-202ENST00000374180 CCNE1P24864 410 aa17.24■□□□□ 0.35
HDHD3-202ENST00000374180 POLR2BP30876 1174 aaKnown RBP17.24■□□□□ 0.35
HDHD3-202ENST00000374180 PSMC2P35998 433 aaKnown RBP17.24■□□□□ 0.35
HDHD3-202ENST00000374180 AARSP49588 968 aaKnown RBP eCLIP17.24■□□□□ 0.35
HDHD3-202ENST00000374180 PMS1P54277 932 aaKnown RBP17.24■□□□□ 0.35
HDHD3-202ENST00000374180 RBP5P82980 135 aa17.24■□□□□ 0.35
HDHD3-202ENST00000374180 FKBP3Q00688 224 aaKnown RBP17.24■□□□□ 0.35
HDHD3-202ENST00000374180 PSMD5Q16401 504 aa17.24■□□□□ 0.35
HDHD3-202ENST00000374180 LLGL2Q6P1M3 1020 aa17.24■□□□□ 0.35
HDHD3-202ENST00000374180 PPFIBP1Q86W92 1011 aa17.24■□□□□ 0.35
HDHD3-202ENST00000374180 APPL2Q8NEU8 664 aa17.24■□□□□ 0.35
HDHD3-202ENST00000374180 EEF2KMTQ96G04 330 aa17.24■□□□□ 0.35
HDHD3-202ENST00000374180 THEGQ9P2T0 379 aa17.24■□□□□ 0.35
HDHD3-202ENST00000374180 M0QZQ0 153 aa17.24■□□□□ 0.35
HDHD3-202ENST00000374180 SPTLC1O15269 473 aa17.24■□□□□ 0.35
HDHD3-202ENST00000374180 SRGAP2BP0DMP2 458 aa17.24■□□□□ 0.35
HDHD3-202ENST00000374180 RPL17P18621 184 aaKnown RBP17.24■□□□□ 0.35
HDHD3-202ENST00000374180 PNPLA4P41247 253 aa17.24■□□□□ 0.35
HDHD3-202ENST00000374180 NDUFV1P49821 464 aa17.24■□□□□ 0.35
HDHD3-202ENST00000374180 TAF6P49848 677 aa17.24■□□□□ 0.35
HDHD3-202ENST00000374180 ANKS3Q6ZW76 656 aa17.24■□□□□ 0.35
HDHD3-202ENST00000374180 TRAPPC11Q7Z392 1133 aa17.24■□□□□ 0.35
HDHD3-202ENST00000374180 USP37Q86T82 979 aa17.24■□□□□ 0.35
HDHD3-202ENST00000374180 FAM186BQ8IYM0 893 aa17.24■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms