RNA–Protein interactions for RNA: ENST00000373560.6

HDAC8-204, Transcript of histone deacetylase 8, humanhuman

TSL 3 BASIC

Gene HDAC8, Length 819 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-204ENST00000373560 GBP1P32455 592 aa13.64□□□□□ -0.23
HDAC8-204ENST00000373560 GNAQP50148 359 aa13.64□□□□□ -0.23
HDAC8-204ENST00000373560 NPEPPSP55786 919 aa13.64□□□□□ -0.23
HDAC8-204ENST00000373560 SETQ01105 290 aaPredicted RBP13.64□□□□□ -0.23
HDAC8-204ENST00000373560 ROR1Q01973 937 aa13.64□□□□□ -0.23
HDAC8-204ENST00000373560 FCHO2Q0JRZ9 810 aa13.64□□□□□ -0.23
HDAC8-204ENST00000373560 SEMA3BQ13214 749 aa13.64□□□□□ -0.23
HDAC8-204ENST00000373560 SART3Q15020 963 aaKnown RBP13.64□□□□□ -0.23
HDAC8-204ENST00000373560 NAB2Q15742 525 aa13.64□□□□□ -0.23
HDAC8-204ENST00000373560 AMHR2Q16671 573 aa13.64□□□□□ -0.23
HDAC8-204ENST00000373560 XKR3Q5GH77 459 aa13.64□□□□□ -0.23
HDAC8-204ENST00000373560 CD300LGQ6UXG3 332 aa13.64□□□□□ -0.23
HDAC8-204ENST00000373560 SRGAP1Q7Z6B7 1085 aa13.64□□□□□ -0.23
HDAC8-204ENST00000373560 RALYLQ86SE5 291 aaKnown RBP13.64□□□□□ -0.23
HDAC8-204ENST00000373560 MARCH9Q86YJ5 346 aa13.64□□□□□ -0.23
HDAC8-204ENST00000373560 ZNF843Q8N446 348 aa13.64□□□□□ -0.23
HDAC8-204ENST00000373560 PNPLA1Q8N8W4 532 aa13.64□□□□□ -0.23
HDAC8-204ENST00000373560 SHKBP1Q8TBC3 707 aa13.64□□□□□ -0.23
HDAC8-204ENST00000373560 PRPF31Q8WWY3 499 aaKnown RBP13.64□□□□□ -0.23
HDAC8-204ENST00000373560 CSRNP2Q9H175 543 aa13.64□□□□□ -0.23
HDAC8-204ENST00000373560 SLC32A1Q9H598 525 aa13.64□□□□□ -0.23
HDAC8-204ENST00000373560 CEP72Q9P209 647 aa13.64□□□□□ -0.23
HDAC8-204ENST00000373560 MBD1Q9UIS9 605 aaPredicted RBP13.64□□□□□ -0.23
HDAC8-204ENST00000373560 SH2B2O14492 632 aaPredicted RBP13.63□□□□□ -0.23
HDAC8-204ENST00000373560 RNF40O75150 1001 aa13.63□□□□□ -0.23
HDAC8-204ENST00000373560 NPTXRO95502 500 aa13.63□□□□□ -0.23
HDAC8-204ENST00000373560 MYL4P12829 197 aa13.63□□□□□ -0.23
HDAC8-204ENST00000373560 ENGP17813 658 aa13.63□□□□□ -0.23
HDAC8-204ENST00000373560 LAMTOR4Q0VGL1 99 aa13.63□□□□□ -0.23
HDAC8-204ENST00000373560 TUSC3Q13454 348 aa13.63□□□□□ -0.23
HDAC8-204ENST00000373560 PPP1R18Q6NYC8 613 aa13.63□□□□□ -0.23
HDAC8-204ENST00000373560 PDZRN4Q6ZMN7 1036 aaPredicted RBP13.63□□□□□ -0.23
HDAC8-204ENST00000373560 CCNI2Q6ZMN8 369 aaPredicted RBP13.63□□□□□ -0.23
HDAC8-204ENST00000373560 CYP2U1Q7Z449 544 aa13.63□□□□□ -0.23
HDAC8-204ENST00000373560 OR2I1PQ8NGU4 316 aa13.63□□□□□ -0.23
HDAC8-204ENST00000373560 NCOA7Q8NI08 942 aa13.63□□□□□ -0.23
HDAC8-204ENST00000373560 FAM200AQ8TCP9 573 aa13.63□□□□□ -0.23
HDAC8-204ENST00000373560 CAMK1GQ96NX5 476 aa13.63□□□□□ -0.23
HDAC8-204ENST00000373560 UBL7Q96S82 380 aaPredicted RBP13.63□□□□□ -0.23
HDAC8-204ENST00000373560 TPSD1Q9BZJ3 242 aa13.63□□□□□ -0.23
HDAC8-204ENST00000373560 INSL5Q9Y5Q6 135 aa13.63□□□□□ -0.23
HDAC8-204ENST00000373560 ATXN2Q99700 1313 aaKnown RBP13.63□□□□□ -0.23
HDAC8-204ENST00000373560 DDX11L8A8MPP1 907 aa13.62□□□□□ -0.23
HDAC8-204ENST00000373560 MICAL2O94851 1124 aa13.62□□□□□ -0.23
HDAC8-204ENST00000373560 EGFP01133 1207 aa13.62□□□□□ -0.23
HDAC8-204ENST00000373560 ARF4P18085 180 aaPredicted RBP13.62□□□□□ -0.23
HDAC8-204ENST00000373560 PRSS12P56730 875 aa13.62□□□□□ -0.23
HDAC8-204ENST00000373560 TRIM61Q5EBN2 209 aa13.62□□□□□ -0.23
HDAC8-204ENST00000373560 NOTUMQ6P988 496 aa13.62□□□□□ -0.23
HDAC8-204ENST00000373560 ZNF605Q86T29 641 aa13.62□□□□□ -0.23
HDAC8-204ENST00000373560 YAF2Q8IY57 180 aa13.62□□□□□ -0.23
HDAC8-204ENST00000373560 SYNPOQ8N3V7 929 aa13.62□□□□□ -0.23
HDAC8-204ENST00000373560 RNF149Q8NC42 400 aa13.62□□□□□ -0.23
HDAC8-204ENST00000373560 PIGKQ92643 395 aa13.62□□□□□ -0.23
HDAC8-204ENST00000373560 LNPKQ9C0E8 428 aa13.62□□□□□ -0.23
HDAC8-204ENST00000373560 FBRSL1Q9HCM7 1045 aaKnown RBP13.62□□□□□ -0.23
HDAC8-204ENST00000373560 TMEM74BQ9NUR3 256 aa13.62□□□□□ -0.23
HDAC8-204ENST00000373560 KIAA1468Q9P260 1216 aa13.62□□□□□ -0.23
HDAC8-204ENST00000373560 PARP2Q9UGN5 583 aa13.62□□□□□ -0.23
HDAC8-204ENST00000373560 PI4KAP42356 2102 aa13.61□□□□□ -0.23
HDAC8-204ENST00000373560 ANTXRLA6NF34 631 aa13.61□□□□□ -0.23
HDAC8-204ENST00000373560 H0Y626 953 aa13.61□□□□□ -0.23
HDAC8-204ENST00000373560 PRRG1O14668 218 aa13.61□□□□□ -0.23
HDAC8-204ENST00000373560 ZNF197O14709 1029 aa13.61□□□□□ -0.23
HDAC8-204ENST00000373560 ERLIN2O94905 339 aa13.61□□□□□ -0.23
HDAC8-204ENST00000373560 TRIM16O95361 564 aa13.61□□□□□ -0.23
HDAC8-204ENST00000373560 U2AF2P26368 475 aaKnown RBP eCLIP13.61□□□□□ -0.23
HDAC8-204ENST00000373560 BRCC3P46736 316 aa13.61□□□□□ -0.23
HDAC8-204ENST00000373560 SPIRE1Q08AE8 756 aa13.61□□□□□ -0.23
HDAC8-204ENST00000373560 FUT2Q10981 343 aa13.61□□□□□ -0.23
HDAC8-204ENST00000373560 C1orf228Q6PIY5 440 aa13.61□□□□□ -0.23
HDAC8-204ENST00000373560 NFXL1Q6ZNB6 911 aa13.61□□□□□ -0.23
HDAC8-204ENST00000373560 DAGLBQ8NCG7 672 aa13.61□□□□□ -0.23
HDAC8-204ENST00000373560 C3orf58Q8NDZ4 430 aa13.61□□□□□ -0.23
HDAC8-204ENST00000373560 EZH1Q92800 747 aaPredicted RBP13.61□□□□□ -0.23
HDAC8-204ENST00000373560 SLITRK6Q9H5Y7 841 aa13.61□□□□□ -0.23
HDAC8-204ENST00000373560 CYP4F11Q9HBI6 524 aa13.61□□□□□ -0.23
HDAC8-204ENST00000373560 NPDC1Q9NQX5 325 aaPredicted RBP13.61□□□□□ -0.23
HDAC8-204ENST00000373560 WRAP73Q9P2S5 460 aaPredicted RBP13.61□□□□□ -0.23
HDAC8-204ENST00000373560 TRIP11Q15643 1979 aa13.61□□□□□ -0.23
HDAC8-204ENST00000373560 URB1O60287 2271 aaKnown RBP13.61□□□□□ -0.23
HDAC8-204ENST00000373560 HELZP42694 1942 aaKnown RBP13.6□□□□□ -0.23
HDAC8-204ENST00000373560 OTOL1A6NHN0 477 aaPredicted RBP13.6□□□□□ -0.23
HDAC8-204ENST00000373560 J3QKU1 62 aa13.6□□□□□ -0.23
HDAC8-204ENST00000373560 ATXN7O15265 892 aaPredicted RBP13.6□□□□□ -0.23
HDAC8-204ENST00000373560 ARHGAP6O43182 974 aa13.6□□□□□ -0.23
HDAC8-204ENST00000373560 PRC1O43663 620 aa13.6□□□□□ -0.23
HDAC8-204ENST00000373560 GAS7O60861 476 aa13.6□□□□□ -0.23
HDAC8-204ENST00000373560 ABLIM3O94929 683 aa13.6□□□□□ -0.23
HDAC8-204ENST00000373560 PRAMEF12O95522 483 aa13.6□□□□□ -0.23
HDAC8-204ENST00000373560 DHPSP49366 369 aaPredicted RBP13.6□□□□□ -0.23
HDAC8-204ENST00000373560 JAK3P52333 1124 aa13.6□□□□□ -0.23
HDAC8-204ENST00000373560 EPHA5P54756 1037 aa13.6□□□□□ -0.23
HDAC8-204ENST00000373560 ARPP19P56211 112 aa13.6□□□□□ -0.23
HDAC8-204ENST00000373560 KARSQ15046 597 aaKnown RBP13.6□□□□□ -0.23
HDAC8-204ENST00000373560 TMEM196Q5HYL7 178 aa13.6□□□□□ -0.23
HDAC8-204ENST00000373560 B3GNT9Q6UX72 402 aa13.6□□□□□ -0.23
HDAC8-204ENST00000373560 RTL10Q7L3V2 364 aa13.6□□□□□ -0.23
HDAC8-204ENST00000373560 ARMCX6Q7L4S7 300 aa13.6□□□□□ -0.23
HDAC8-204ENST00000373560 MICU3Q86XE3 530 aa13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms