RNA–Protein interactions for RNA: ENST00000373554.5

HDAC8-201, Transcript of histone deacetylase 8, humanhuman

TSL 2 BASIC

Gene HDAC8, Length 833 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-201ENST00000373554 TGFB1I1O43294 461 aa13.02□□□□□ -0.33
HDAC8-201ENST00000373554 MBTPS2O43462 519 aa13.02□□□□□ -0.33
HDAC8-201ENST00000373554 KINO60870 393 aaKnown RBP13.02□□□□□ -0.33
HDAC8-201ENST00000373554 IL9P15248 144 aa13.02□□□□□ -0.33
HDAC8-201ENST00000373554 RPL17P18621 184 aaKnown RBP13.02□□□□□ -0.33
HDAC8-201ENST00000373554 IGFBP6P24592 240 aaPredicted RBP13.02□□□□□ -0.33
HDAC8-201ENST00000373554 TKTP29401 623 aaKnown RBP13.02□□□□□ -0.33
HDAC8-201ENST00000373554 CYP2J2P51589 502 aa13.02□□□□□ -0.33
HDAC8-201ENST00000373554 SNW1Q13573 536 aaKnown RBP13.02□□□□□ -0.33
HDAC8-201ENST00000373554 KCNB1Q14721 858 aa13.02□□□□□ -0.33
HDAC8-201ENST00000373554 CD300LGQ6UXG3 332 aa13.02□□□□□ -0.33
HDAC8-201ENST00000373554 GLYCTKQ8IVS8 523 aa13.02□□□□□ -0.33
HDAC8-201ENST00000373554 EFCAB13Q8IY85 973 aa13.02□□□□□ -0.33
HDAC8-201ENST00000373554 ENGASEQ8NFI3 743 aa13.02□□□□□ -0.33
HDAC8-201ENST00000373554 SLC22A17Q8WUG5 538 aa13.02□□□□□ -0.33
HDAC8-201ENST00000373554 SUSD3Q96L08 255 aa13.02□□□□□ -0.33
HDAC8-201ENST00000373554 FBXL18Q96ME1 805 aa13.02□□□□□ -0.33
HDAC8-201ENST00000373554 TIGD1Q96MW7 591 aa13.02□□□□□ -0.33
HDAC8-201ENST00000373554 UHRF1Q96T88 793 aaPredicted RBP13.02□□□□□ -0.33
HDAC8-201ENST00000373554 SFXN1Q9H9B4 322 aa13.02□□□□□ -0.33
HDAC8-201ENST00000373554 RMND1Q9NWS8 449 aa13.02□□□□□ -0.33
HDAC8-201ENST00000373554 CLIC2O15247 247 aa13.01□□□□□ -0.33
HDAC8-201ENST00000373554 SMC2O95347 1197 aa13.01□□□□□ -0.33
HDAC8-201ENST00000373554 C1RP00736 705 aa13.01□□□□□ -0.33
HDAC8-201ENST00000373554 PAX3P23760 479 aa13.01□□□□□ -0.33
HDAC8-201ENST00000373554 GUCY2FP51841 1108 aa13.01□□□□□ -0.33
HDAC8-201ENST00000373554 TFAMQ00059 246 aaKnown RBP13.01□□□□□ -0.33
HDAC8-201ENST00000373554 PNOCQ13519 176 aa13.01□□□□□ -0.33
HDAC8-201ENST00000373554 SURF1Q15526 300 aa13.01□□□□□ -0.33
HDAC8-201ENST00000373554 SMAD2Q15796 467 aaKnown RBP13.01□□□□□ -0.33
HDAC8-201ENST00000373554 SNRNP35Q16560 246 aaKnown RBP13.01□□□□□ -0.33
HDAC8-201ENST00000373554 C9orf57Q5W0N0 161 aa13.01□□□□□ -0.33
HDAC8-201ENST00000373554 CES5AQ6NT32 575 aa13.01□□□□□ -0.33
HDAC8-201ENST00000373554 SYCE2Q6PIF2 218 aa13.01□□□□□ -0.33
HDAC8-201ENST00000373554 CBWD2Q8IUF1 395 aa13.01□□□□□ -0.33
HDAC8-201ENST00000373554 C12orf56Q8IXR9 622 aa13.01□□□□□ -0.33
HDAC8-201ENST00000373554 XXYLT1Q8NBI6 393 aa13.01□□□□□ -0.33
HDAC8-201ENST00000373554 ZSWIM2Q8NEG5 633 aa13.01□□□□□ -0.33
HDAC8-201ENST00000373554 LNX1Q8TBB1 728 aaPredicted RBP13.01□□□□□ -0.33
HDAC8-201ENST00000373554 CACTINQ8WUQ7 758 aaKnown RBP13.01□□□□□ -0.33
HDAC8-201ENST00000373554 MAN1C1Q9NR34 630 aa13.01□□□□□ -0.33
HDAC8-201ENST00000373554 DPP3Q9NY33 737 aa13.01□□□□□ -0.33
HDAC8-201ENST00000373554 USP15Q9Y4E8 981 aaPredicted RBP13.01□□□□□ -0.33
HDAC8-201ENST00000373554 ANK1P16157 1881 aa13□□□□□ -0.33
HDAC8-201ENST00000373554 ARHGEF37A1IGU5 675 aa13□□□□□ -0.33
HDAC8-201ENST00000373554 EXOC3O60645 756 aa13□□□□□ -0.33
HDAC8-201ENST00000373554 TMEM191BP0C7N4 346 aa13□□□□□ -0.33
HDAC8-201ENST00000373554 UBE2HP62256 183 aa13□□□□□ -0.33
HDAC8-201ENST00000373554 ITIH3Q06033 890 aa13□□□□□ -0.33
HDAC8-201ENST00000373554 VARS2Q5ST30 1063 aaKnown RBP13□□□□□ -0.33
HDAC8-201ENST00000373554 ZNF280DQ6N043 979 aa13□□□□□ -0.33
HDAC8-201ENST00000373554 DSTYKQ6XUX3 929 aa13□□□□□ -0.33
HDAC8-201ENST00000373554 PALB2Q86YC2 1186 aa13□□□□□ -0.33
HDAC8-201ENST00000373554 APPL2Q8NEU8 664 aa13□□□□□ -0.33
HDAC8-201ENST00000373554 ZNF560Q96MR9 790 aa13□□□□□ -0.33
HDAC8-201ENST00000373554 GSDMAQ96QA5 445 aa13□□□□□ -0.33
HDAC8-201ENST00000373554 APOL5Q9BWW9 433 aa13□□□□□ -0.33
HDAC8-201ENST00000373554 PDE11AQ9HCR9 933 aa13□□□□□ -0.33
HDAC8-201ENST00000373554 MTRRQ9UBK8 725 aa13□□□□□ -0.33
HDAC8-201ENST00000373554 PRKAG3Q9UGI9 489 aa13□□□□□ -0.33
HDAC8-201ENST00000373554 RAPGEFL1Q9UHV5 662 aa13□□□□□ -0.33
HDAC8-201ENST00000373554 PCDHB8Q9UN66 801 aa13□□□□□ -0.33
HDAC8-201ENST00000373554 BACE2Q9Y5Z0 518 aa13□□□□□ -0.33
HDAC8-201ENST00000373554 ANO9A1A5B4 782 aa12.99□□□□□ -0.33
HDAC8-201ENST00000373554 H7C4K7 107 aa12.99□□□□□ -0.33
HDAC8-201ENST00000373554 M0QZQ0 153 aa12.99□□□□□ -0.33
HDAC8-201ENST00000373554 PIRO00625 290 aa12.99□□□□□ -0.33
HDAC8-201ENST00000373554 PDXKO00764 312 aa12.99□□□□□ -0.33
HDAC8-201ENST00000373554 PPEF2O14830 753 aa12.99□□□□□ -0.33
HDAC8-201ENST00000373554 TGM5O43548 720 aa12.99□□□□□ -0.33
HDAC8-201ENST00000373554 GADD45BO75293 160 aaPredicted RBP12.99□□□□□ -0.33
HDAC8-201ENST00000373554 PRPF40AO75400 957 aaKnown RBP12.99□□□□□ -0.33
HDAC8-201ENST00000373554 ODC1P11926 461 aa12.99□□□□□ -0.33
HDAC8-201ENST00000373554 OR1D2P34982 312 aa12.99□□□□□ -0.33
HDAC8-201ENST00000373554 PNPLA4P41247 253 aa12.99□□□□□ -0.33
HDAC8-201ENST00000373554 AARSP49588 968 aaKnown RBP eCLIP12.99□□□□□ -0.33
HDAC8-201ENST00000373554 TAF6P49848 677 aa12.99□□□□□ -0.33
HDAC8-201ENST00000373554 WNT7BP56706 349 aa12.99□□□□□ -0.33
HDAC8-201ENST00000373554 LILRA4P59901 499 aa12.99□□□□□ -0.33
HDAC8-201ENST00000373554 YWHAHQ04917 246 aaPredicted RBP12.99□□□□□ -0.33
HDAC8-201ENST00000373554 CBX2Q14781 532 aaPredicted RBP12.99□□□□□ -0.33
HDAC8-201ENST00000373554 SV2CQ496J9 727 aa12.99□□□□□ -0.33
HDAC8-201ENST00000373554 RARS2Q5T160 578 aaKnown RBP12.99□□□□□ -0.33
HDAC8-201ENST00000373554 USP37Q86T82 979 aa12.99□□□□□ -0.33
HDAC8-201ENST00000373554 TMEM130Q8N3G9 435 aa12.99□□□□□ -0.33
HDAC8-201ENST00000373554 GUF1Q8N442 669 aaKnown RBP12.99□□□□□ -0.33
HDAC8-201ENST00000373554 RDH13Q8NBN7 331 aa12.99□□□□□ -0.33
HDAC8-201ENST00000373554 HDAC7Q8WUI4 952 aa12.99□□□□□ -0.33
HDAC8-201ENST00000373554 SMARCE1Q969G3 411 aa12.99□□□□□ -0.33
HDAC8-201ENST00000373554 ANKRD36BP1Q96IX9 119 aa12.99□□□□□ -0.33
HDAC8-201ENST00000373554 RIPOR3Q96MK2 946 aa12.99□□□□□ -0.33
HDAC8-201ENST00000373554 NECAB3Q96P71 396 aaPredicted RBP12.99□□□□□ -0.33
HDAC8-201ENST00000373554 FNBP1Q96RU3 617 aa12.99□□□□□ -0.33
HDAC8-201ENST00000373554 POP1Q99575 1024 aaKnown RBP12.99□□□□□ -0.33
HDAC8-201ENST00000373554 CLSTN3Q9BQT9 956 aa12.99□□□□□ -0.33
HDAC8-201ENST00000373554 GTPBP4Q9BZE4 634 aaKnown RBP12.99□□□□□ -0.33
HDAC8-201ENST00000373554 S1PR5Q9H228 398 aa12.99□□□□□ -0.33
HDAC8-201ENST00000373554 ADAM7Q9H2U9 754 aa12.99□□□□□ -0.33
HDAC8-201ENST00000373554 KCTD10Q9H3F6 313 aa12.99□□□□□ -0.33
HDAC8-201ENST00000373554 PLEKHA4Q9H4M7 779 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms