RNA–Protein interactions for RNA: ENST00000373316.4

PGK1-201, Transcript of phosphoglycerate kinase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PGK1, Length 4,887 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PGK1-201ENST00000373316 PRUNE1Q86TP1 453 aa11.19□□□□□ -0.62
PGK1-201ENST00000373316 GLYCTKQ8IVS8 523 aa11.19□□□□□ -0.62
PGK1-201ENST00000373316 THNSL1Q8IYQ7 743 aa11.19□□□□□ -0.62
PGK1-201ENST00000373316 PIGOQ8TEQ8 1089 aa11.19□□□□□ -0.62
PGK1-201ENST00000373316 SIKE1Q9BRV8 207 aa11.19□□□□□ -0.62
PGK1-201ENST00000373316 DDX47Q9H0S4 455 aaKnown RBP11.19□□□□□ -0.62
PGK1-201ENST00000373316 ZMYM2Q9UBW7 1377 aa11.18□□□□□ -0.62
PGK1-201ENST00000373316 SRGAP2CP0DJJ0 459 aa11.18□□□□□ -0.62
PGK1-201ENST00000373316 NLRP11P59045 1033 aaKnown RBP11.18□□□□□ -0.62
PGK1-201ENST00000373316 STK4Q13043 487 aa11.18□□□□□ -0.62
PGK1-201ENST00000373316 IER5Q5VY09 327 aa11.18□□□□□ -0.62
PGK1-201ENST00000373316 BANK1Q8NDB2 785 aa11.18□□□□□ -0.62
PGK1-201ENST00000373316 UPF1Q92900 1129 aaKnown RBP eCLIP11.18□□□□□ -0.62
PGK1-201ENST00000373316 TSPAN17Q96FV3 270 aa11.18□□□□□ -0.62
PGK1-201ENST00000373316 MED15Q96RN5 788 aa11.18□□□□□ -0.62
PGK1-201ENST00000373316 FAM213AQ9BRX8 229 aa11.18□□□□□ -0.62
PGK1-201ENST00000373316 GLIS2Q9BZE0 524 aaPredicted RBP11.18□□□□□ -0.62
PGK1-201ENST00000373316 AIPL1Q9NZN9 384 aa11.18□□□□□ -0.62
PGK1-201ENST00000373316 FAM47DPA6NHR8 397 aa11.18□□□□□ -0.62
PGK1-201ENST00000373316 TOM1L1O75674 476 aa11.18□□□□□ -0.62
PGK1-201ENST00000373316 PSMC1P62191 440 aaKnown RBP11.18□□□□□ -0.62
PGK1-201ENST00000373316 RBP5P82980 135 aa11.18□□□□□ -0.62
PGK1-201ENST00000373316 BSPRYQ5W0U4 402 aa11.18□□□□□ -0.62
PGK1-201ENST00000373316 CCNYQ8ND76 341 aa11.18□□□□□ -0.62
PGK1-201ENST00000373316 MTBPQ96DY7 904 aa11.18□□□□□ -0.62
PGK1-201ENST00000373316 EHD2Q9NZN4 543 aa11.18□□□□□ -0.62
PGK1-201ENST00000373316 GABBR1Q9UBS5 961 aa11.18□□□□□ -0.62
PGK1-201ENST00000373316 DYNC1LI1Q9Y6G9 523 aaKnown RBP11.18□□□□□ -0.62
PGK1-201ENST00000373316 NID2Q14112 1375 aa11.18□□□□□ -0.62
PGK1-201ENST00000373316 RBAK-RBAKDNI3L0D1 243 aa11.18□□□□□ -0.62
PGK1-201ENST00000373316 TNPO2O14787 897 aaKnown RBP11.18□□□□□ -0.62
PGK1-201ENST00000373316 MGEA5O60502 916 aa11.18□□□□□ -0.62
PGK1-201ENST00000373316 CD4P01730 458 aa11.18□□□□□ -0.62
PGK1-201ENST00000373316 STIP1P31948 543 aaKnown RBP11.18□□□□□ -0.62
PGK1-201ENST00000373316 AARSP49588 968 aaKnown RBP eCLIP11.18□□□□□ -0.62
PGK1-201ENST00000373316 SNRNP48Q6IEG0 339 aaKnown RBP11.18□□□□□ -0.62
PGK1-201ENST00000373316 SH3RF1Q7Z6J0 888 aa11.18□□□□□ -0.62
PGK1-201ENST00000373316 JAMLQ86YT9 394 aa11.18□□□□□ -0.62
PGK1-201ENST00000373316 FAM149B1Q96BN6 582 aa11.18□□□□□ -0.62
PGK1-201ENST00000373316 CCT8L2Q96SF2 557 aa11.18□□□□□ -0.62
PGK1-201ENST00000373316 DDX50Q9BQ39 737 aaKnown RBP11.18□□□□□ -0.62
PGK1-201ENST00000373316 NXF1Q9UBU9 619 aaKnown RBP11.18□□□□□ -0.62
PGK1-201ENST00000373316 PPP2R3BQ9Y5P8 575 aa11.18□□□□□ -0.62
PGK1-201ENST00000373316 GOLGA8TH3BQL2 631 aa11.18□□□□□ -0.62
PGK1-201ENST00000373316 PIK3R2O00459 728 aa11.18□□□□□ -0.62
PGK1-201ENST00000373316 HSPA13P48723 471 aa11.18□□□□□ -0.62
PGK1-201ENST00000373316 BCAR1P56945 870 aa11.18□□□□□ -0.62
PGK1-201ENST00000373316 NCAPHQ15003 741 aa11.18□□□□□ -0.62
PGK1-201ENST00000373316 PDCD2Q16342 344 aaPredicted RBP11.18□□□□□ -0.62
PGK1-201ENST00000373316 MEA1Q16626 185 aa11.18□□□□□ -0.62
PGK1-201ENST00000373316 DAB2IPQ5VWQ8 1189 aa11.18□□□□□ -0.62
PGK1-201ENST00000373316 TPCN2Q8NHX9 752 aa11.18□□□□□ -0.62
PGK1-201ENST00000373316 UHMK1Q8TAS1 419 aaKnown RBP11.18□□□□□ -0.62
PGK1-201ENST00000373316 VCPIP1Q96JH7 1222 aa11.18□□□□□ -0.62
PGK1-201ENST00000373316 TEX13BQ9BXU2 312 aa11.18□□□□□ -0.62
PGK1-201ENST00000373316 PHACTR1Q9C0D0 580 aa11.18□□□□□ -0.62
PGK1-201ENST00000373316 ECT2Q9H8V3 914 aa11.18□□□□□ -0.62
PGK1-201ENST00000373316 TRAF3IP3Q9Y228 551 aa11.18□□□□□ -0.62
PGK1-201ENST00000373316 NRXN2Q9P2S2 1712 aa11.17□□□□□ -0.62
PGK1-201ENST00000373316 CYP11B2P19099 503 aa11.17□□□□□ -0.62
PGK1-201ENST00000373316 PNPLA4P41247 253 aa11.17□□□□□ -0.62
PGK1-201ENST00000373316 LRRC31Q6UY01 552 aa11.17□□□□□ -0.62
PGK1-201ENST00000373316 TTC8Q8TAM2 541 aa11.17□□□□□ -0.62
PGK1-201ENST00000373316 CFAP36Q96G28 342 aa11.17□□□□□ -0.62
PGK1-201ENST00000373316 CHP1Q99653 195 aa11.17□□□□□ -0.62
PGK1-201ENST00000373316 FUT8Q9BYC5 575 aa11.17□□□□□ -0.62
PGK1-201ENST00000373316 SMARCAD1Q9H4L7 1026 aa11.17□□□□□ -0.62
PGK1-201ENST00000373316 L1RE1Q9UN81 338 aa11.17□□□□□ -0.62
PGK1-201ENST00000373316 FAF1Q9UNN5 650 aaPredicted RBP11.17□□□□□ -0.62
PGK1-201ENST00000373316 ANGPTL3Q9Y5C1 460 aa11.17□□□□□ -0.62
PGK1-201ENST00000373316 LTBP1Q14766 1721 aa11.17□□□□□ -0.62
PGK1-201ENST00000373316 TRIM68Q6AZZ1 485 aa11.17□□□□□ -0.62
PGK1-201ENST00000373316 ACAD10Q6JQN1 1059 aa11.17□□□□□ -0.62
PGK1-201ENST00000373316 C11orf70Q9BRQ4 267 aa11.17□□□□□ -0.62
PGK1-201ENST00000373316 CNPY3Q9BT09 278 aa11.17□□□□□ -0.62
PGK1-201ENST00000373316 NAT9Q9BTE0 207 aa11.17□□□□□ -0.62
PGK1-201ENST00000373316 PRMT7Q9NVM4 692 aaPredicted RBP11.17□□□□□ -0.62
PGK1-201ENST00000373316 SUN2Q9UH99 717 aa11.17□□□□□ -0.62
PGK1-201ENST00000373316 ZNRF3Q9ULT6 936 aa11.17□□□□□ -0.62
PGK1-201ENST00000373316 AP5Z1O43299 807 aa11.17□□□□□ -0.62
PGK1-201ENST00000373316 NDUFB10O96000 172 aa11.17□□□□□ -0.62
PGK1-201ENST00000373316 FGRP09769 529 aa11.17□□□□□ -0.62
PGK1-201ENST00000373316 ABCE1P61221 599 aaKnown RBP11.17□□□□□ -0.62
PGK1-201ENST00000373316 TSPY1Q01534 308 aa11.17□□□□□ -0.62
PGK1-201ENST00000373316 GRB10Q13322 594 aa11.17□□□□□ -0.62
PGK1-201ENST00000373316 COG2Q14746 738 aa11.17□□□□□ -0.62
PGK1-201ENST00000373316 PTGISQ16647 500 aa11.17□□□□□ -0.62
PGK1-201ENST00000373316 SPOPLQ6IQ16 392 aa11.17□□□□□ -0.62
PGK1-201ENST00000373316 SLC30A10Q6XR72 485 aa11.17□□□□□ -0.62
PGK1-201ENST00000373316 PABPC3Q9H361 631 aaKnown RBP11.17□□□□□ -0.62
PGK1-201ENST00000373316 DDX60LQ5H9U9 1706 aaKnown RBP11.17□□□□□ -0.62
PGK1-201ENST00000373316 ITKQ08881 620 aa11.17□□□□□ -0.62
PGK1-201ENST00000373316 PDIA2Q13087 525 aaKnown RBP11.17□□□□□ -0.62
PGK1-201ENST00000373316 GPS1Q13098 491 aa11.17□□□□□ -0.62
PGK1-201ENST00000373316 SNRNP35Q16560 246 aaKnown RBP11.17□□□□□ -0.62
PGK1-201ENST00000373316 C18orf8Q96DM3 657 aa11.17□□□□□ -0.62
PGK1-201ENST00000373316 ZSWIM1Q9BR11 485 aa11.17□□□□□ -0.62
PGK1-201ENST00000373316 KDM4CQ9H3R0 1056 aa11.17□□□□□ -0.62
PGK1-201ENST00000373316 TRABDQ9H4I3 376 aa11.17□□□□□ -0.62
PGK1-201ENST00000373316 XAB2Q9HCS7 855 aaKnown RBP11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms