RNA–Protein interactions for RNA: ENST00000373298.6

ITM2A-201, Transcript of integral membrane protein 2A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ITM2A, Length 1,641 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITM2A-201ENST00000373298 APBB1IPQ7Z5R6 666 aaPredicted RBP10.3□□□□□ -0.76
ITM2A-201ENST00000373298 DHX40Q8IX18 779 aaKnown RBP10.3□□□□□ -0.76
ITM2A-201ENST00000373298 C1orf127Q8N9H9 656 aa10.3□□□□□ -0.76
ITM2A-201ENST00000373298 KLHL23Q8NBE8 558 aa10.3□□□□□ -0.76
ITM2A-201ENST00000373298 URGCPQ8TCY9 931 aa10.3□□□□□ -0.76
ITM2A-201ENST00000373298 GDPD5Q8WTR4 605 aa10.3□□□□□ -0.76
ITM2A-201ENST00000373298 TSG101Q99816 390 aa10.3□□□□□ -0.76
ITM2A-201ENST00000373298 SLC28A3Q9HAS3 691 aa10.3□□□□□ -0.76
ITM2A-201ENST00000373298 PLEKHA5Q9HAU0 1116 aa10.3□□□□□ -0.76
ITM2A-201ENST00000373298 UTP3Q9NQZ2 479 aaKnown RBP eCLIP10.3□□□□□ -0.769e-18■■■■■ 223.6
ITM2A-201ENST00000373298 ANO10Q9NW15 660 aa10.3□□□□□ -0.76
ITM2A-201ENST00000373298 CETN3O15182 167 aa10.29□□□□□ -0.76
ITM2A-201ENST00000373298 SPTLC1O15269 473 aa10.29□□□□□ -0.76
ITM2A-201ENST00000373298 GRM6O15303 877 aa10.29□□□□□ -0.76
ITM2A-201ENST00000373298 LPXNO60711 386 aa10.29□□□□□ -0.76
ITM2A-201ENST00000373298 ERCC5P28715 1186 aaPredicted RBP10.29□□□□□ -0.76
ITM2A-201ENST00000373298 CTNNB1P35222 781 aa10.29□□□□□ -0.76
ITM2A-201ENST00000373298 BMPR1AP36894 532 aa10.29□□□□□ -0.76
ITM2A-201ENST00000373298 FXR1P51114 621 aaKnown RBP eCLIP10.29□□□□□ -0.76
ITM2A-201ENST00000373298 ERVK-21P61565 698 aa10.29□□□□□ -0.76
ITM2A-201ENST00000373298 GRIN2CQ14957 1233 aa10.29□□□□□ -0.76
ITM2A-201ENST00000373298 RAB30Q15771 203 aa10.29□□□□□ -0.76
ITM2A-201ENST00000373298 SPATA1Q5VX52 437 aa10.29□□□□□ -0.76
ITM2A-201ENST00000373298 TDRD10Q5VZ19 366 aaKnown RBP10.29□□□□□ -0.76
ITM2A-201ENST00000373298 SLC39A11Q8N1S5 342 aa10.29□□□□□ -0.76
ITM2A-201ENST00000373298 AOPEPQ8N6M6 819 aa10.29□□□□□ -0.76
ITM2A-201ENST00000373298 CGRRF1Q99675 332 aa10.29□□□□□ -0.76
ITM2A-201ENST00000373298 MRPL9Q9BYD2 267 aaKnown RBP10.29□□□□□ -0.76
ITM2A-201ENST00000373298 GTPBP4Q9BZE4 634 aaKnown RBP10.29□□□□□ -0.76
ITM2A-201ENST00000373298 ZNF576Q9H609 170 aa10.29□□□□□ -0.76
ITM2A-201ENST00000373298 ASB7Q9H672 318 aa10.29□□□□□ -0.76
ITM2A-201ENST00000373298 MMRN2Q9H8L6 949 aa10.29□□□□□ -0.76
ITM2A-201ENST00000373298 INTS13Q9NVM9 706 aa10.29□□□□□ -0.76
ITM2A-201ENST00000373298 FANCLQ9NW38 375 aa10.29□□□□□ -0.76
ITM2A-201ENST00000373298 DPP3Q9NY33 737 aa10.29□□□□□ -0.76
ITM2A-201ENST00000373298 FRMD4BQ9Y2L6 1034 aa10.29□□□□□ -0.76
ITM2A-201ENST00000373298 NFE2L3Q9Y4A8 694 aa10.29□□□□□ -0.76
ITM2A-201ENST00000373298 PODXLO00592 558 aa10.29□□□□□ -0.76
ITM2A-201ENST00000373298 KIAA0391O15091 583 aaKnown RBP10.29□□□□□ -0.76
ITM2A-201ENST00000373298 IL18RAPO95256 599 aa10.29□□□□□ -0.76
ITM2A-201ENST00000373298 VNN1O95497 513 aa10.29□□□□□ -0.76
ITM2A-201ENST00000373298 EFEMP2O95967 443 aa10.29□□□□□ -0.76
ITM2A-201ENST00000373298 ITGB3P05106 788 aa10.29□□□□□ -0.76
ITM2A-201ENST00000373298 CCDC192P0DO97 292 aa10.29□□□□□ -0.76
ITM2A-201ENST00000373298 RPL13P26373 211 aaKnown RBP10.29□□□□□ -0.76
ITM2A-201ENST00000373298 PSMC2P35998 433 aaKnown RBP10.29□□□□□ -0.76
ITM2A-201ENST00000373298 BRCC3P46736 316 aa10.29□□□□□ -0.76
ITM2A-201ENST00000373298 GCLMP48507 274 aa10.29□□□□□ -0.76
ITM2A-201ENST00000373298 VAMP7P51809 220 aa10.29□□□□□ -0.76
ITM2A-201ENST00000373298 CLDN10P78369 228 aa10.29□□□□□ -0.76
ITM2A-201ENST00000373298 BFSP1Q12934 665 aa10.29□□□□□ -0.76
ITM2A-201ENST00000373298 IQCB1Q15051 598 aa10.29□□□□□ -0.76
ITM2A-201ENST00000373298 KYAT1Q16773 422 aa10.29□□□□□ -0.76
ITM2A-201ENST00000373298 CBWD6Q4V339 395 aa10.29□□□□□ -0.76
ITM2A-201ENST00000373298 CBWD3Q5JTY5 395 aa10.29□□□□□ -0.76
ITM2A-201ENST00000373298 CBWD5Q5RIA9 395 aa10.29□□□□□ -0.76
ITM2A-201ENST00000373298 FILIP1Q7Z7B0 1213 aa10.29□□□□□ -0.76
ITM2A-201ENST00000373298 LAPTM4BQ86VI4 370 aa10.29□□□□□ -0.76
ITM2A-201ENST00000373298 CREBRFQ8IUR6 639 aa10.29□□□□□ -0.76
ITM2A-201ENST00000373298 SLC35C1Q96A29 364 aa10.29□□□□□ -0.76
ITM2A-201ENST00000373298 GPR62Q9BZJ7 368 aa10.29□□□□□ -0.76
ITM2A-201ENST00000373298 PRDM12Q9H4Q4 367 aa10.29□□□□□ -0.76
ITM2A-201ENST00000373298 KIAA1586Q9HCI6 787 aa10.29□□□□□ -0.76
ITM2A-201ENST00000373298 KANSL3Q9P2N6 904 aa10.29□□□□□ -0.76
ITM2A-201ENST00000373298 C2CD2Q9Y426 696 aa10.29□□□□□ -0.76
ITM2A-201ENST00000373298 PCDHGA10Q9Y5H3 936 aa10.29□□□□□ -0.76
ITM2A-201ENST00000373298 ANO9A1A5B4 782 aa10.28□□□□□ -0.76
ITM2A-201ENST00000373298 BICDL2A1A5D9 508 aa10.28□□□□□ -0.76
ITM2A-201ENST00000373298 PIRO00625 290 aa10.28□□□□□ -0.76
ITM2A-201ENST00000373298 SLC16A3O15427 465 aaKnown RBP10.28□□□□□ -0.76
ITM2A-201ENST00000373298 FGF18O76093 207 aa10.28□□□□□ -0.76
ITM2A-201ENST00000373298 B3GAT3O94766 335 aa10.28□□□□□ -0.76
ITM2A-201ENST00000373298 C4BPAP04003 597 aaKnown RBP10.28□□□□□ -0.76
ITM2A-201ENST00000373298 ATP1A3P13637 1013 aa10.28□□□□□ -0.76
ITM2A-201ENST00000373298 TNNI1P19237 187 aa10.28□□□□□ -0.76
ITM2A-201ENST00000373298 COL9A1P20849 921 aa10.28□□□□□ -0.76
ITM2A-201ENST00000373298 POLR2BP30876 1174 aaKnown RBP10.28□□□□□ -0.76
ITM2A-201ENST00000373298 IRS1P35568 1242 aa10.28□□□□□ -0.76
ITM2A-201ENST00000373298 PPP1R2P41236 205 aa10.28□□□□□ -0.76
ITM2A-201ENST00000373298 MCCD1P59942 119 aaPredicted RBP10.28□□□□□ -0.76
ITM2A-201ENST00000373298 ADGRE1Q14246 886 aa10.28□□□□□ -0.76
ITM2A-201ENST00000373298 HSP90AA2PQ14568 343 aaPredicted RBP10.28□□□□□ -0.76
ITM2A-201ENST00000373298 PROX2Q3B8N5 592 aa10.28□□□□□ -0.76
ITM2A-201ENST00000373298 DCAF17Q5H9S7 520 aaPredicted RBP10.28□□□□□ -0.76
ITM2A-201ENST00000373298 C9orf57Q5W0N0 161 aa10.28□□□□□ -0.76
ITM2A-201ENST00000373298 C15orf39Q6ZRI6 1047 aa10.28□□□□□ -0.76
ITM2A-201ENST00000373298 NYAP1Q6ZVC0 841 aa10.28□□□□□ -0.76
ITM2A-201ENST00000373298 SV2AQ7L0J3 742 aa10.28□□□□□ -0.76
ITM2A-201ENST00000373298 TRAPPC11Q7Z392 1133 aa10.28□□□□□ -0.76
ITM2A-201ENST00000373298 LUZP1Q86V48 1076 aa10.28□□□□□ -0.76
ITM2A-201ENST00000373298 CD302Q8IX05 232 aa10.28□□□□□ -0.76
ITM2A-201ENST00000373298 ENOX1Q8TC92 643 aaKnown RBP10.28□□□□□ -0.76
ITM2A-201ENST00000373298 SPPL3Q8TCT6 385 aa10.28□□□□□ -0.76
ITM2A-201ENST00000373298 AUTS2Q8WXX7 1259 aa10.28□□□□□ -0.76
ITM2A-201ENST00000373298 SEMA4DQ92854 862 aa10.28□□□□□ -0.76
ITM2A-201ENST00000373298 IGSF21Q96ID5 467 aa10.28□□□□□ -0.76
ITM2A-201ENST00000373298 CNOT6LQ96LI5 555 aaKnown RBP10.28□□□□□ -0.76
ITM2A-201ENST00000373298 CEP63Q96MT8 703 aa10.28□□□□□ -0.76
ITM2A-201ENST00000373298 ZNF558Q96NG5 402 aa10.28□□□□□ -0.76
ITM2A-201ENST00000373298 FAM193BQ96PV7 902 aaPredicted RBP10.28□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms