RNA–Protein interactions for RNA: ENST00000372922.8

TRERF1-204, Transcript of transcriptional regulating factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRERF1, Length 7,286 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRERF1-204ENST00000372922 SPATA16Q9BXB7 569 aa10.39□□□□□ -0.75
TRERF1-204ENST00000372922 NDEL1Q9GZM8 345 aa10.39□□□□□ -0.75
TRERF1-204ENST00000372922 GOLPH3LQ9H4A5 285 aa10.39□□□□□ -0.75
TRERF1-204ENST00000372922 TAF1DQ9H5J8 278 aaPredicted RBP10.39□□□□□ -0.75
TRERF1-204ENST00000372922 NYAP2Q9P242 653 aa10.39□□□□□ -0.75
TRERF1-204ENST00000372922 CCL15-CCL14A0A0B4J2E2 113 aa10.39□□□□□ -0.75
TRERF1-204ENST00000372922 RPS12P25398 132 aaKnown RBP10.39□□□□□ -0.75
TRERF1-204ENST00000372922 NMT1P30419 496 aaKnown RBP10.39□□□□□ -0.75
TRERF1-204ENST00000372922 MAGOHP61326 146 aaKnown RBP10.39□□□□□ -0.75
TRERF1-204ENST00000372922 AP2B1P63010 937 aa10.39□□□□□ -0.75
TRERF1-204ENST00000372922 TRIM28Q13263 835 aaKnown RBP10.39□□□□□ -0.75
TRERF1-204ENST00000372922 NCOA4Q13772 614 aa10.39□□□□□ -0.75
TRERF1-204ENST00000372922 VPS72Q15906 364 aa10.39□□□□□ -0.75
TRERF1-204ENST00000372922 CCL15Q16663 113 aa10.39□□□□□ -0.75
TRERF1-204ENST00000372922 RNF180Q86T96 592 aa10.39□□□□□ -0.75
TRERF1-204ENST00000372922 SENP7Q9BQF6 1050 aa10.39□□□□□ -0.75
TRERF1-204ENST00000372922 FAM129AQ9BZQ8 928 aa10.39□□□□□ -0.75
TRERF1-204ENST00000372922 ALDH8A1Q9H2A2 487 aaPredicted RBP10.39□□□□□ -0.75
TRERF1-204ENST00000372922 RGL1Q9NZL6 768 aa10.39□□□□□ -0.75
TRERF1-204ENST00000372922 SLC30A1Q9Y6M5 507 aa10.39□□□□□ -0.75
TRERF1-204ENST00000372922 PP2D1A8MPX8 630 aa10.39□□□□□ -0.75
TRERF1-204ENST00000372922 C5orf58C9J3I9 102 aa10.39□□□□□ -0.75
TRERF1-204ENST00000372922 IRF1P10914 325 aa10.39□□□□□ -0.75
TRERF1-204ENST00000372922 MAP3K10Q02779 954 aa10.39□□□□□ -0.75
TRERF1-204ENST00000372922 PIGHQ14442 188 aaPredicted RBP10.39□□□□□ -0.75
TRERF1-204ENST00000372922 RGS9BPQ6ZS82 235 aa10.39□□□□□ -0.75
TRERF1-204ENST00000372922 MPP4Q96JB8 637 aa10.39□□□□□ -0.75
TRERF1-204ENST00000372922 DACH2Q96NX9 599 aa10.39□□□□□ -0.75
TRERF1-204ENST00000372922 OSBPL1AQ9BXW6 950 aa10.39□□□□□ -0.75
TRERF1-204ENST00000372922 SYTL2Q9HCH5 934 aa10.39□□□□□ -0.75
TRERF1-204ENST00000372922 NIPSNAP3AQ9UFN0 247 aaPredicted RBP10.39□□□□□ -0.75
TRERF1-204ENST00000372922 SPATA31A6Q5VVP1 1343 aa10.39□□□□□ -0.75
TRERF1-204ENST00000372922 PLA2R1Q13018 1463 aa10.39□□□□□ -0.75
TRERF1-204ENST00000372922 HMBSP08397 361 aa10.39□□□□□ -0.75
TRERF1-204ENST00000372922 EMC2Q15006 297 aa10.39□□□□□ -0.75
TRERF1-204ENST00000372922 ADCK2Q7Z695 626 aa10.39□□□□□ -0.75
TRERF1-204ENST00000372922 BRAFP15056 766 aa10.38□□□□□ -0.75
TRERF1-204ENST00000372922 FCGRTP55899 365 aa10.38□□□□□ -0.75
TRERF1-204ENST00000372922 UGP2Q16851 508 aa10.38□□□□□ -0.75
TRERF1-204ENST00000372922 MGAT5BQ3V5L5 792 aa10.38□□□□□ -0.75
TRERF1-204ENST00000372922 STYK1Q6J9G0 422 aa10.38□□□□□ -0.75
TRERF1-204ENST00000372922 FAM180AQ6UWF9 173 aa10.38□□□□□ -0.75
TRERF1-204ENST00000372922 ATL2Q8NHH9 583 aa10.38□□□□□ -0.75
TRERF1-204ENST00000372922 C1orf54Q8WWF1 131 aa10.38□□□□□ -0.75
TRERF1-204ENST00000372922 TGS1Q96RS0 853 aaKnown RBP10.38□□□□□ -0.75
TRERF1-204ENST00000372922 ERAP1Q9NZ08 941 aa10.38□□□□□ -0.75
TRERF1-204ENST00000372922 CHD1O14646 1710 aa10.38□□□□□ -0.75
TRERF1-204ENST00000372922 HLA-DPA1P20036 260 aa10.38□□□□□ -0.75
TRERF1-204ENST00000372922 IL10P22301 178 aa10.38□□□□□ -0.75
TRERF1-204ENST00000372922 OR1G1P47890 313 aa10.38□□□□□ -0.75
TRERF1-204ENST00000372922 PPP2R2AP63151 447 aa10.38□□□□□ -0.75
TRERF1-204ENST00000372922 MRPS25P82663 173 aaKnown RBP10.38□□□□□ -0.75
TRERF1-204ENST00000372922 SBK1Q52WX2 424 aa10.38□□□□□ -0.75
TRERF1-204ENST00000372922 LMBRD2Q68DH5 695 aaPredicted RBP10.38□□□□□ -0.75
TRERF1-204ENST00000372922 ARMC6Q6NXE6 501 aa10.38□□□□□ -0.75
TRERF1-204ENST00000372922 KDELC2Q7Z4H8 507 aa10.38□□□□□ -0.75
TRERF1-204ENST00000372922 SRBD1Q8N5C6 995 aaKnown RBP10.38□□□□□ -0.75
TRERF1-204ENST00000372922 EEF2KO00418 725 aaKnown RBP10.38□□□□□ -0.75
TRERF1-204ENST00000372922 HARS2P49590 506 aaKnown RBP10.38□□□□□ -0.75
TRERF1-204ENST00000372922 SNRPFP62306 86 aaKnown RBP10.38□□□□□ -0.75
TRERF1-204ENST00000372922 R3HDM1Q15032 1099 aaKnown RBP10.38□□□□□ -0.75
TRERF1-204ENST00000372922 BEND6Q5SZJ8 279 aaPredicted RBP10.38□□□□□ -0.75
TRERF1-204ENST00000372922 FAM151AQ8WW52 585 aa10.38□□□□□ -0.75
TRERF1-204ENST00000372922 OPTNQ96CV9 577 aa10.38□□□□□ -0.75
TRERF1-204ENST00000372922 STK33Q9BYT3 514 aa10.38□□□□□ -0.75
TRERF1-204ENST00000372922 GGA3Q9NZ52 723 aa10.38□□□□□ -0.75
TRERF1-204ENST00000372922 MYO1CO00159 1063 aa10.38□□□□□ -0.75
TRERF1-204ENST00000372922 NDUFB10O96000 172 aa10.38□□□□□ -0.75
TRERF1-204ENST00000372922 KRT8P05787 483 aa10.38□□□□□ -0.75
TRERF1-204ENST00000372922 ACOT2P49753 483 aa10.38□□□□□ -0.75
TRERF1-204ENST00000372922 PDCLQ13371 301 aa10.38□□□□□ -0.75
TRERF1-204ENST00000372922 APEX2Q9UBZ4 518 aa10.38□□□□□ -0.75
TRERF1-204ENST00000372922 ZNF521Q96K83 1311 aa10.38□□□□□ -0.75
TRERF1-204ENST00000372922 ARHGEF40Q8TER5 1519 aa10.38□□□□□ -0.75
TRERF1-204ENST00000372922 NPHP3-ACAD11A0A0J9YXS1 232 aa10.38□□□□□ -0.75
TRERF1-204ENST00000372922 POLRMTO00411 1230 aaKnown RBP10.38□□□□□ -0.75
TRERF1-204ENST00000372922 HBP1O60381 514 aa10.38□□□□□ -0.75
TRERF1-204ENST00000372922 TFRCP02786 760 aaKnown RBP10.38□□□□□ -0.75
TRERF1-204ENST00000372922 PDGFRAP16234 1089 aa10.38□□□□□ -0.75
TRERF1-204ENST00000372922 NCAPHQ15003 741 aa10.38□□□□□ -0.75
TRERF1-204ENST00000372922 SPDYAQ5MJ70 313 aa10.38□□□□□ -0.75
TRERF1-204ENST00000372922 VCPKMTQ9H867 229 aa10.38□□□□□ -0.75
TRERF1-204ENST00000372922 TARSL2A2RTX5 802 aaKnown RBP10.38□□□□□ -0.75
TRERF1-204ENST00000372922 PDGFRBP09619 1106 aa10.38□□□□□ -0.75
TRERF1-204ENST00000372922 LAMC2Q13753 1193 aa10.38□□□□□ -0.75
TRERF1-204ENST00000372922 STAT4Q14765 748 aa10.38□□□□□ -0.75
TRERF1-204ENST00000372922 ATF7IP2Q5U623 682 aa10.38□□□□□ -0.75
TRERF1-204ENST00000372922 LRRC8EQ6NSJ5 796 aa10.38□□□□□ -0.75
TRERF1-204ENST00000372922 XRRA1Q6P2D8 792 aa10.38□□□□□ -0.75
TRERF1-204ENST00000372922 CCDC90BQ9GZT6 254 aa10.38□□□□□ -0.75
TRERF1-204ENST00000372922 UNC45AQ9H3U1 944 aa10.38□□□□□ -0.75
TRERF1-204ENST00000372922 PRMT7Q9NVM4 692 aaPredicted RBP10.38□□□□□ -0.75
TRERF1-204ENST00000372922 DCTN4Q9UJW0 460 aa10.38□□□□□ -0.75
TRERF1-204ENST00000372922 NR3C2P08235 984 aa10.37□□□□□ -0.75
TRERF1-204ENST00000372922 NOTUMQ6P988 496 aa10.37□□□□□ -0.75
TRERF1-204ENST00000372922 NT5C1AQ9BXI3 368 aa10.37□□□□□ -0.75
TRERF1-204ENST00000372922 CARD9Q9H257 536 aa10.37□□□□□ -0.75
TRERF1-204ENST00000372922 ARHGEF38Q9NXL2 777 aa10.37□□□□□ -0.75
TRERF1-204ENST00000372922 NSMCE4AQ9NXX6 385 aa10.37□□□□□ -0.75
TRERF1-204ENST00000372922 NOP53Q9NZM5 478 aaKnown RBP10.37□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms