RNA–Protein interactions for RNA: ENST00000372837.3

CHCHD1-202, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 1, humanhuman

TSL 2 BASIC

Gene CHCHD1, Length 1,202 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD1-202ENST00000372837 NSUN3Q9H649 340 aaKnown RBP13.8□□□□□ -0.2
CHCHD1-202ENST00000372837 PSTPIP2Q9H939 334 aa13.8□□□□□ -0.2
CHCHD1-202ENST00000372837 METTL14Q9HCE5 456 aaKnown RBP13.8□□□□□ -0.2
CHCHD1-202ENST00000372837 PDGFCQ9NRA1 345 aa13.8□□□□□ -0.2
CHCHD1-202ENST00000372837 PANK4Q9NVE7 773 aa13.8□□□□□ -0.2
CHCHD1-202ENST00000372837 TMEM260Q9NX78 707 aa13.8□□□□□ -0.2
CHCHD1-202ENST00000372837 FAM153AQ9UHL3 310 aa13.8□□□□□ -0.2
CHCHD1-202ENST00000372837 TPX2Q9ULW0 747 aaKnown RBP13.8□□□□□ -0.2
CHCHD1-202ENST00000372837 FRMPD2Q68DX3 1309 aaPredicted RBP13.8□□□□□ -0.2
CHCHD1-202ENST00000372837 PODXLO00592 558 aa13.79□□□□□ -0.2
CHCHD1-202ENST00000372837 SLC37A4O43826 429 aa13.79□□□□□ -0.2
CHCHD1-202ENST00000372837 TDP2O95551 362 aa13.79□□□□□ -0.2
CHCHD1-202ENST00000372837 PLEKP08567 350 aaPredicted RBP13.79□□□□□ -0.2
CHCHD1-202ENST00000372837 ATP5DP30049 168 aa13.79□□□□□ -0.2
CHCHD1-202ENST00000372837 MMP13P45452 471 aa13.79□□□□□ -0.2
CHCHD1-202ENST00000372837 KLK7P49862 253 aa13.79□□□□□ -0.2
CHCHD1-202ENST00000372837 HADHBP55084 474 aaKnown RBP13.79□□□□□ -0.2
CHCHD1-202ENST00000372837 CNTN2Q02246 1040 aa13.79□□□□□ -0.2
CHCHD1-202ENST00000372837 SIGLEC14Q08ET2 396 aa13.79□□□□□ -0.2
CHCHD1-202ENST00000372837 KLHL30Q0D2K2 578 aa13.79□□□□□ -0.2
CHCHD1-202ENST00000372837 HLTFQ14527 1009 aaKnown RBP eCLIP13.79□□□□□ -0.2
CHCHD1-202ENST00000372837 ODF2Q5BJF6 829 aa13.79□□□□□ -0.2
CHCHD1-202ENST00000372837 SPDYAQ5MJ70 313 aa13.79□□□□□ -0.2
CHCHD1-202ENST00000372837 TMC3Q7Z5M5 1100 aa13.79□□□□□ -0.2
CHCHD1-202ENST00000372837 TEX9Q8N6V9 391 aa13.79□□□□□ -0.2
CHCHD1-202ENST00000372837 N4BP2L2Q92802 583 aaPredicted RBP13.79□□□□□ -0.2
CHCHD1-202ENST00000372837 RMDN1Q96DB5 314 aa13.79□□□□□ -0.2
CHCHD1-202ENST00000372837 IFT74Q96LB3 600 aa13.79□□□□□ -0.2
CHCHD1-202ENST00000372837 ZNF317Q96PQ6 595 aaPredicted RBP13.79□□□□□ -0.2
CHCHD1-202ENST00000372837 KANSL2Q9H9L4 492 aa13.79□□□□□ -0.2
CHCHD1-202ENST00000372837 GPCPD1Q9NPB8 672 aa13.79□□□□□ -0.2
CHCHD1-202ENST00000372837 FAM207AQ9NSI2 230 aaPredicted RBP13.79□□□□□ -0.2
CHCHD1-202ENST00000372837 RASAL2Q9UJF2 1139 aa13.79□□□□□ -0.2
CHCHD1-202ENST00000372837 SALL4Q9UJQ4 1053 aa13.79□□□□□ -0.2
CHCHD1-202ENST00000372837 Q9Y3F1 56 aa13.79□□□□□ -0.2
CHCHD1-202ENST00000372837 F8VZ95 297 aa13.78□□□□□ -0.2
CHCHD1-202ENST00000372837 GALR2O43603 387 aaPredicted RBP13.78□□□□□ -0.2
CHCHD1-202ENST00000372837 ATP5HO75947 161 aa13.78□□□□□ -0.2
CHCHD1-202ENST00000372837 NOL4O94818 638 aa13.78□□□□□ -0.2
CHCHD1-202ENST00000372837 ATP6V1G2O95670 118 aa13.78□□□□□ -0.2
CHCHD1-202ENST00000372837 KLRC1P26715 233 aa13.78□□□□□ -0.2
CHCHD1-202ENST00000372837 PURAQ00577 322 aaKnown RBP13.78□□□□□ -0.2
CHCHD1-202ENST00000372837 GFPT1Q06210 699 aaPredicted RBP13.78□□□□□ -0.2
CHCHD1-202ENST00000372837 MKRN4PQ13434 485 aaPredicted RBP13.78□□□□□ -0.2
CHCHD1-202ENST00000372837 SMAD4Q13485 552 aaKnown RBP13.78□□□□□ -0.2
CHCHD1-202ENST00000372837 BFSP2Q13515 415 aa13.78□□□□□ -0.2
CHCHD1-202ENST00000372837 UAP1Q16222 522 aaPredicted RBP13.78□□□□□ -0.2
CHCHD1-202ENST00000372837 NFIL3Q16649 462 aa13.78□□□□□ -0.2
CHCHD1-202ENST00000372837 EPC2Q52LR7 807 aa13.78□□□□□ -0.2
CHCHD1-202ENST00000372837 TNFAIP8L3Q5GJ75 292 aa13.78□□□□□ -0.2
CHCHD1-202ENST00000372837 FAM47CQ5HY64 1035 aa13.78□□□□□ -0.2
CHCHD1-202ENST00000372837 TAOK1Q7L7X3 1001 aa13.78□□□□□ -0.2
CHCHD1-202ENST00000372837 DGLUCYQ7Z3D6 616 aa13.78□□□□□ -0.2
CHCHD1-202ENST00000372837 LRRC47Q8N1G4 583 aaKnown RBP13.78□□□□□ -0.2
CHCHD1-202ENST00000372837 GRAMD1AQ96CP6 724 aa13.78□□□□□ -0.2
CHCHD1-202ENST00000372837 CARD9Q9H257 536 aa13.78□□□□□ -0.2
CHCHD1-202ENST00000372837 PPANQ9NQ55 473 aaKnown RBP13.78□□□□□ -0.2
CHCHD1-202ENST00000372837 SAMD15Q9P1V8 674 aa13.78□□□□□ -0.2
CHCHD1-202ENST00000372837 TFR2Q9UP52 801 aa13.78□□□□□ -0.2
CHCHD1-202ENST00000372837 UTP18Q9Y5J1 556 aaKnown RBP eCLIP13.78□□□□□ -0.2
CHCHD1-202ENST00000372837 CCDC189A1A4V9 331 aa13.77□□□□□ -0.21
CHCHD1-202ENST00000372837 FRMD3A2A2Y4 597 aa13.77□□□□□ -0.21
CHCHD1-202ENST00000372837 H3BNC9 293 aa13.77□□□□□ -0.21
CHCHD1-202ENST00000372837 ATP2A1O14983 1001 aa13.77□□□□□ -0.21
CHCHD1-202ENST00000372837 CETN3O15182 167 aa13.77□□□□□ -0.21
CHCHD1-202ENST00000372837 EEF2P13639 858 aaKnown RBP13.77□□□□□ -0.21
CHCHD1-202ENST00000372837 PDE6CP51160 858 aa13.77□□□□□ -0.21
CHCHD1-202ENST00000372837 NUBP1P53384 320 aa13.77□□□□□ -0.21
CHCHD1-202ENST00000372837 SEC24CP53992 1094 aa13.77□□□□□ -0.21
CHCHD1-202ENST00000372837 ELF3P78545 371 aaPredicted RBP13.77□□□□□ -0.21
CHCHD1-202ENST00000372837 POU5F1Q01860 360 aaKnown RBP13.77□□□□□ -0.21
CHCHD1-202ENST00000372837 C1QBPQ07021 282 aaKnown RBP13.77□□□□□ -0.21
CHCHD1-202ENST00000372837 GPM6BQ13491 265 aa13.77□□□□□ -0.21
CHCHD1-202ENST00000372837 NBPF20Q3BBV1 942 aa13.77□□□□□ -0.21
CHCHD1-202ENST00000372837 C11orf91Q3C1V1 193 aa13.77□□□□□ -0.21
CHCHD1-202ENST00000372837 TAPT1Q6NXT6 567 aa13.77□□□□□ -0.21
CHCHD1-202ENST00000372837 CNKSR3Q6P9H4 555 aa13.77□□□□□ -0.21
CHCHD1-202ENST00000372837 DYMQ7RTS9 669 aa13.77□□□□□ -0.21
CHCHD1-202ENST00000372837 CPXCR1Q8N123 301 aa13.77□□□□□ -0.21
CHCHD1-202ENST00000372837 FAM133AQ8N9E0 248 aa13.77□□□□□ -0.21
CHCHD1-202ENST00000372837 CCDC63Q8NA47 563 aa13.77□□□□□ -0.21
CHCHD1-202ENST00000372837 TBC1D5Q92609 795 aa13.77□□□□□ -0.21
CHCHD1-202ENST00000372837 NKD2Q969F2 451 aaPredicted RBP13.77□□□□□ -0.21
CHCHD1-202ENST00000372837 DNAJC19Q96DA6 116 aa13.77□□□□□ -0.21
CHCHD1-202ENST00000372837 HES6Q96HZ4 224 aa13.77□□□□□ -0.21
CHCHD1-202ENST00000372837 FAM20AQ96MK3 541 aa13.77□□□□□ -0.21
CHCHD1-202ENST00000372837 GANQ9H2C0 597 aa13.77□□□□□ -0.21
CHCHD1-202ENST00000372837 PABPC3Q9H361 631 aaKnown RBP13.77□□□□□ -0.21
CHCHD1-202ENST00000372837 CPVLQ9H3G5 476 aa13.77□□□□□ -0.21
CHCHD1-202ENST00000372837 KCNMB3Q9NPA1 279 aa13.77□□□□□ -0.21
CHCHD1-202ENST00000372837 HAUS2Q9NVX0 235 aa13.77□□□□□ -0.21
CHCHD1-202ENST00000372837 NOP53Q9NZM5 478 aaKnown RBP13.77□□□□□ -0.21
CHCHD1-202ENST00000372837 POTEMA6NI47 508 aa13.76□□□□□ -0.21
CHCHD1-202ENST00000372837 LOC730098B7Z3J9 87 aa13.76□□□□□ -0.21
CHCHD1-202ENST00000372837 SLC16A3O15427 465 aaKnown RBP13.76□□□□□ -0.21
CHCHD1-202ENST00000372837 NCK2O43639 380 aa13.76□□□□□ -0.21
CHCHD1-202ENST00000372837 CALUO43852 315 aaPredicted RBP13.76□□□□□ -0.21
CHCHD1-202ENST00000372837 H2AFZP0C0S5 128 aa13.76□□□□□ -0.21
CHCHD1-202ENST00000372837 PLA2G4BP0C869 781 aa13.76□□□□□ -0.21
CHCHD1-202ENST00000372837 FERP16591 822 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms