RNA–Protein interactions for RNA: ENST00000372066.7

LDB3-204, Transcript of LIM domain binding 3, humanhuman

TSL 1 (best) BASIC

Gene LDB3, Length 1,598 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-204ENST00000372066 SLFN12LQ6IEE8 588 aa15.11■□□□□ 0.01
LDB3-204ENST00000372066 CBWD2Q8IUF1 395 aa15.11■□□□□ 0.01
LDB3-204ENST00000372066 ARHGEF19Q8IW93 802 aa15.11■□□□□ 0.01
LDB3-204ENST00000372066 EXOC8Q8IYI6 725 aa15.11■□□□□ 0.01
LDB3-204ENST00000372066 FAM71AQ8IYT1 594 aa15.11■□□□□ 0.01
LDB3-204ENST00000372066 EIF1ADQ8N9N8 165 aaKnown RBP15.11■□□□□ 0.01
LDB3-204ENST00000372066 FBXL13Q8NEE6 735 aa15.11■□□□□ 0.01
LDB3-204ENST00000372066 PLEKHO2Q8TD55 490 aa15.11■□□□□ 0.01
LDB3-204ENST00000372066 AFAP1L1Q8TED9 768 aa15.11■□□□□ 0.01
LDB3-204ENST00000372066 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP15.11■□□□□ 0.01
LDB3-204ENST00000372066 FAM167AQ96KS9 214 aa15.11■□□□□ 0.01
LDB3-204ENST00000372066 NT5C1BQ96P26 610 aa15.11■□□□□ 0.01
LDB3-204ENST00000372066 UHRF1Q96T88 793 aaPredicted RBP15.11■□□□□ 0.01
LDB3-204ENST00000372066 DHX33Q9H6R0 707 aaKnown RBP15.11■□□□□ 0.01
LDB3-204ENST00000372066 NRBP2Q9NSY0 501 aa15.11■□□□□ 0.01
LDB3-204ENST00000372066 AMFRQ9UKV5 643 aa15.11■□□□□ 0.01
LDB3-204ENST00000372066 STYXL1Q9Y6J8 313 aa15.11■□□□□ 0.01
LDB3-204ENST00000372066 ZNF233A6NK53 670 aa15.11■□□□□ 0.01
LDB3-204ENST00000372066 LRRIQ3A6PVS8 624 aaPredicted RBP15.11■□□□□ 0.01
LDB3-204ENST00000372066 CCDC188H7C350 402 aa15.11■□□□□ 0.01
LDB3-204ENST00000372066 PGRMC1O00264 195 aaKnown RBP15.11■□□□□ 0.01
LDB3-204ENST00000372066 GAS2O43903 313 aaKnown RBP15.11■□□□□ 0.01
LDB3-204ENST00000372066 GZMAP12544 262 aa15.11■□□□□ 0.01
LDB3-204ENST00000372066 ARHGAP1Q07960 439 aa15.11■□□□□ 0.01
LDB3-204ENST00000372066 MTERF2Q49AM1 385 aa15.11■□□□□ 0.01
LDB3-204ENST00000372066 GDF6Q6KF10 455 aaPredicted RBP15.11■□□□□ 0.01
LDB3-204ENST00000372066 SLC39A4Q6P5W5 647 aa15.11■□□□□ 0.01
LDB3-204ENST00000372066 EMBQ6PCB8 327 aa15.11■□□□□ 0.01
LDB3-204ENST00000372066 HERC6Q8IVU3 1022 aa15.11■□□□□ 0.01
LDB3-204ENST00000372066 IFT20Q8IY31 132 aa15.11■□□□□ 0.01
LDB3-204ENST00000372066 FAM71BQ8TC56 605 aa15.11■□□□□ 0.01
LDB3-204ENST00000372066 AENQ8WTP8 325 aaKnown RBP15.11■□□□□ 0.01
LDB3-204ENST00000372066 SLC7A3Q8WY07 619 aa15.11■□□□□ 0.01
LDB3-204ENST00000372066 SHC3Q92529 594 aa15.11■□□□□ 0.01
LDB3-204ENST00000372066 BICD1Q96G01 975 aa15.11■□□□□ 0.01
LDB3-204ENST00000372066 PSMB7Q99436 277 aa15.11■□□□□ 0.01
LDB3-204ENST00000372066 LRRC1Q9BTT6 524 aa15.11■□□□□ 0.01
LDB3-204ENST00000372066 ISCUQ9H1K1 167 aa15.11■□□□□ 0.01
LDB3-204ENST00000372066 RBM12Q9NTZ6 932 aaKnown RBP15.11■□□□□ 0.01
LDB3-204ENST00000372066 TMEM59LQ9UK28 342 aa15.11■□□□□ 0.01
LDB3-204ENST00000372066 CHD9Q3L8U1 2897 aa15.1■□□□□ 0.01
LDB3-204ENST00000372066 KCNK3O14649 394 aa15.1■□□□□ 0.01
LDB3-204ENST00000372066 EXTL3O43909 919 aa15.1■□□□□ 0.01
LDB3-204ENST00000372066 LDHAP00338 332 aaKnown RBP15.1■□□□□ 0.01
LDB3-204ENST00000372066 UBA1P22314 1058 aaKnown RBP15.1■□□□□ 0.01
LDB3-204ENST00000372066 LIG4P49917 911 aa15.1■□□□□ 0.01
LDB3-204ENST00000372066 DGKDQ16760 1214 aa15.1■□□□□ 0.01
LDB3-204ENST00000372066 CYFIP1Q7L576 1253 aa15.1■□□□□ 0.01
LDB3-204ENST00000372066 DAAM2Q86T65 1068 aa15.1■□□□□ 0.01
LDB3-204ENST00000372066 NT5DC3Q86UY8 548 aa15.1■□□□□ 0.01
LDB3-204ENST00000372066 RASGEF1CQ8N431 466 aa15.1■□□□□ 0.01
LDB3-204ENST00000372066 ARNTL2Q8WYA1 636 aa15.1■□□□□ 0.01
LDB3-204ENST00000372066 DHX38Q92620 1227 aaKnown RBP15.1■□□□□ 0.01
LDB3-204ENST00000372066 KAT2BQ92831 832 aa15.1■□□□□ 0.01
LDB3-204ENST00000372066 SAAL1Q96ER3 474 aa15.1■□□□□ 0.01
LDB3-204ENST00000372066 HES6Q96HZ4 224 aa15.1■□□□□ 0.01
LDB3-204ENST00000372066 KIFC3Q9BVG8 833 aa15.1■□□□□ 0.01
LDB3-204ENST00000372066 TMEM134Q9H6X4 195 aa15.1■□□□□ 0.01
LDB3-204ENST00000372066 TTC7AQ9ULT0 858 aaPredicted RBP15.1■□□□□ 0.01
LDB3-204ENST00000372066 MTCH2Q9Y6C9 303 aa15.1■□□□□ 0.01
LDB3-204ENST00000372066 ADGRA3Q8IWK6 1321 aa15.1■□□□□ 0.01
LDB3-204ENST00000372066 GOLGA8IPA6NC78 632 aa15.09■□□□□ 0.01
LDB3-204ENST00000372066 GOLGA8JA6NMD2 632 aa15.09■□□□□ 0.01
LDB3-204ENST00000372066 RTN2O75298 545 aa15.09■□□□□ 0.01
LDB3-204ENST00000372066 LRRN2O75325 713 aa15.09■□□□□ 0.01
LDB3-204ENST00000372066 MTA2O94776 668 aa15.09■□□□□ 0.01
LDB3-204ENST00000372066 ARL2P36404 184 aa15.09■□□□□ 0.01
LDB3-204ENST00000372066 TNNT3P45378 269 aaPredicted RBP15.09■□□□□ 0.01
LDB3-204ENST00000372066 CLDN10P78369 228 aa15.09■□□□□ 0.01
LDB3-204ENST00000372066 SP2Q02086 613 aa15.09■□□□□ 0.01
LDB3-204ENST00000372066 GCNT1Q02742 428 aa15.09■□□□□ 0.01
LDB3-204ENST00000372066 TAP1Q03518 808 aa15.09■□□□□ 0.01
LDB3-204ENST00000372066 PSMD6Q15008 389 aa15.09■□□□□ 0.01
LDB3-204ENST00000372066 PPP2R5EQ16537 467 aa15.09■□□□□ 0.01
LDB3-204ENST00000372066 C11orf63Q6NUN7 778 aa15.09■□□□□ 0.01
LDB3-204ENST00000372066 METTL7BQ6UX53 244 aa15.09■□□□□ 0.01
LDB3-204ENST00000372066 SESTD1Q86VW0 696 aa15.09■□□□□ 0.01
LDB3-204ENST00000372066 C7orf31Q8N865 590 aa15.09■□□□□ 0.01
LDB3-204ENST00000372066 DEPTORQ8TB45 409 aa15.09■□□□□ 0.01
LDB3-204ENST00000372066 SLC35G2Q8TBE7 412 aa15.09■□□□□ 0.01
LDB3-204ENST00000372066 CAVIN3Q969G5 261 aa15.09■□□□□ 0.01
LDB3-204ENST00000372066 RAB20Q9NX57 234 aa15.09■□□□□ 0.01
LDB3-204ENST00000372066 EPOPA6NHQ4 379 aa15.08■□□□□ 0
LDB3-204ENST00000372066 TMCO5BA8MYB1 307 aa15.08■□□□□ 0
LDB3-204ENST00000372066 MIF4GDA9UHW6 222 aaKnown RBP15.08■□□□□ 0
LDB3-204ENST00000372066 TLL1O43897 1013 aa15.08■□□□□ 0
LDB3-204ENST00000372066 BAIAP3O94812 1187 aa15.08■□□□□ 0
LDB3-204ENST00000372066 SELPP16109 830 aa15.08■□□□□ 0
LDB3-204ENST00000372066 SP4Q02446 784 aa15.08■□□□□ 0
LDB3-204ENST00000372066 TFF2Q03403 129 aa15.08■□□□□ 0
LDB3-204ENST00000372066 PAK2Q13177 524 aa15.08■□□□□ 0
LDB3-204ENST00000372066 LAMC2Q13753 1193 aa15.08■□□□□ 0
LDB3-204ENST00000372066 TARBP2Q15633 366 aaKnown RBP15.08■□□□□ 0
LDB3-204ENST00000372066 AAK1Q2M2I8 961 aa15.08■□□□□ 0
LDB3-204ENST00000372066 TAS1R3Q7RTX0 852 aa15.08■□□□□ 0
LDB3-204ENST00000372066 TRMT1LQ7Z2T5 733 aaKnown RBP15.08■□□□□ 0
LDB3-204ENST00000372066 DHX37Q8IY37 1157 aaKnown RBP15.08■□□□□ 0
LDB3-204ENST00000372066 PPM1KQ8N3J5 372 aa15.08■□□□□ 0
LDB3-204ENST00000372066 EPS8L1Q8TE68 723 aa15.08■□□□□ 0
LDB3-204ENST00000372066 SEPT1Q8WYJ6 367 aa15.08■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms