RNA–Protein interactions for RNA: ENST00000371937.8

ATPAF1-202, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATPAF1, Length 1,827 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-202ENST00000371937 NOP9Q86U38 636 aaKnown RBP28.2■■■□□ 2.11
ATPAF1-202ENST00000371937 RPUSD2Q8IZ73 545 aaKnown RBP28.2■■■□□ 2.11
ATPAF1-202ENST00000371937 SLC35F6Q8N357 371 aa28.2■■■□□ 2.11
ATPAF1-202ENST00000371937 UNC93B1Q9H1C4 597 aa28.2■■■□□ 2.11
ATPAF1-202ENST00000371937 DPP3Q9NY33 737 aa28.2■■■□□ 2.11
ATPAF1-202ENST00000371937 CNTN6Q9UQ52 1028 aa28.2■■■□□ 2.11
ATPAF1-202ENST00000371937 PCDHB4Q9Y5E5 795 aa28.2■■■□□ 2.11
ATPAF1-202ENST00000371937 UMODL1Q5DID0 1318 aa28.2■■■□□ 2.11
ATPAF1-202ENST00000371937 H2AFZP0C0S5 128 aa28.2■■■□□ 2.1
ATPAF1-202ENST00000371937 NFX1Q12986 1120 aaKnown RBP28.2■■■□□ 2.1
ATPAF1-202ENST00000371937 ALKAL1Q6UXT8 129 aa28.2■■■□□ 2.1
ATPAF1-202ENST00000371937 H2AFVQ71UI9 128 aa28.2■■■□□ 2.1
ATPAF1-202ENST00000371937 CNTN3Q9P232 1028 aa28.2■■■□□ 2.1
ATPAF1-202ENST00000371937 BTNL10A8MVZ5 291 aa28.19■■■□□ 2.1
ATPAF1-202ENST00000371937 RBP5P82980 135 aa28.19■■■□□ 2.1
ATPAF1-202ENST00000371937 FAM26DQ5JW98 314 aa28.19■■■□□ 2.1
ATPAF1-202ENST00000371937 ZNF677Q86XU0 584 aa28.19■■■□□ 2.1
ATPAF1-202ENST00000371937 CXorf38Q8TB03 319 aa28.19■■■□□ 2.1
ATPAF1-202ENST00000371937 VRTNQ9H8Y1 702 aa28.19■■■□□ 2.1
ATPAF1-202ENST00000371937 IPPQ9Y573 584 aa28.19■■■□□ 2.1
ATPAF1-202ENST00000371937 CTAGE9A4FU28 777 aa28.18■■■□□ 2.1
ATPAF1-202ENST00000371937 FANCGO15287 622 aa28.18■■■□□ 2.1
ATPAF1-202ENST00000371937 YWHAEP62258 255 aaKnown RBP28.18■■■□□ 2.1
ATPAF1-202ENST00000371937 CDR2Q01850 454 aa28.18■■■□□ 2.1
ATPAF1-202ENST00000371937 TRIM71Q2Q1W2 868 aaKnown RBP28.18■■■□□ 2.1
ATPAF1-202ENST00000371937 ZNF667Q5HYK9 610 aa28.18■■■□□ 2.1
ATPAF1-202ENST00000371937 TRIM58Q8NG06 486 aa28.18■■■□□ 2.1
ATPAF1-202ENST00000371937 APOL6Q9BWW8 343 aa28.18■■■□□ 2.1
ATPAF1-202ENST00000371937 PAK6Q9NQU5 681 aaPredicted RBP28.18■■■□□ 2.1
ATPAF1-202ENST00000371937 RALGAPA2Q2PPJ7 1873 aa28.18■■■□□ 2.1
ATPAF1-202ENST00000371937 DNM1LO00429 736 aa28.18■■■□□ 2.1
ATPAF1-202ENST00000371937 TACC1O75410 805 aa28.18■■■□□ 2.1
ATPAF1-202ENST00000371937 FBXO47Q5MNV8 452 aa28.18■■■□□ 2.1
ATPAF1-202ENST00000371937 TMEM270Q6UE05 265 aa28.18■■■□□ 2.1
ATPAF1-202ENST00000371937 PACSIN1Q9BY11 444 aa28.18■■■□□ 2.1
ATPAF1-202ENST00000371937 PARP2Q9UGN5 583 aa28.18■■■□□ 2.1
ATPAF1-202ENST00000371937 SQORQ9Y6N5 450 aa28.18■■■□□ 2.1
ATPAF1-202ENST00000371937 ARVCFO00192 962 aa28.17■■■□□ 2.1
ATPAF1-202ENST00000371937 P4HA1P13674 534 aa28.17■■■□□ 2.1
ATPAF1-202ENST00000371937 ZSCAN20P17040 1043 aaPredicted RBP28.17■■■□□ 2.1
ATPAF1-202ENST00000371937 AKAP5P24588 427 aa28.17■■■□□ 2.1
ATPAF1-202ENST00000371937 POLR2BP30876 1174 aaKnown RBP28.17■■■□□ 2.1
ATPAF1-202ENST00000371937 HACE1Q8IYU2 909 aa28.17■■■□□ 2.1
ATPAF1-202ENST00000371937 UBR7Q8N806 425 aa28.17■■■□□ 2.1
ATPAF1-202ENST00000371937 USP38Q8NB14 1042 aa28.17■■■□□ 2.1
ATPAF1-202ENST00000371937 BEST2Q8NFU1 509 aa28.17■■■□□ 2.1
ATPAF1-202ENST00000371937 NOX5Q96PH1 765 aa28.17■■■□□ 2.1
ATPAF1-202ENST00000371937 ACP6Q9NPH0 428 aa28.17■■■□□ 2.1
ATPAF1-202ENST00000371937 AGAP1Q9UPQ3 857 aa28.17■■■□□ 2.1
ATPAF1-202ENST00000371937 STAU1O95793 577 aaKnown RBP28.16■■■□□ 2.1
ATPAF1-202ENST00000371937 GZMAP12544 262 aa28.16■■■□□ 2.1
ATPAF1-202ENST00000371937 CHRNB2P17787 502 aa28.16■■■□□ 2.1
ATPAF1-202ENST00000371937 PAK2Q13177 524 aa28.16■■■□□ 2.1
ATPAF1-202ENST00000371937 ZBTB6Q15916 424 aa28.16■■■□□ 2.1
ATPAF1-202ENST00000371937 WDR72Q3MJ13 1102 aa28.16■■■□□ 2.1
ATPAF1-202ENST00000371937 TAF3Q5VWG9 929 aa28.16■■■□□ 2.1
ATPAF1-202ENST00000371937 SMG8Q8ND04 991 aaKnown RBP28.16■■■□□ 2.1
ATPAF1-202ENST00000371937 ALS2CR12Q96Q35 445 aa28.16■■■□□ 2.1
ATPAF1-202ENST00000371937 NAPGQ99747 312 aaPredicted RBP28.16■■■□□ 2.1
ATPAF1-202ENST00000371937 DNAH12Q6ZR08 3092 aa28.16■■■□□ 2.1
ATPAF1-202ENST00000371937 XPOTO43592 962 aaKnown RBP28.15■■■□□ 2.1
ATPAF1-202ENST00000371937 ASPAP45381 313 aa28.15■■■□□ 2.1
ATPAF1-202ENST00000371937 TERF1P54274 439 aa28.15■■■□□ 2.1
ATPAF1-202ENST00000371937 XKR4Q5GH76 650 aa28.15■■■□□ 2.1
ATPAF1-202ENST00000371937 RBBP8NLQ8NC74 664 aaPredicted RBP28.15■■■□□ 2.1
ATPAF1-202ENST00000371937 DDX1Q92499 740 aaKnown RBP28.15■■■□□ 2.1
ATPAF1-202ENST00000371937 HPDLQ96IR7 371 aa28.15■■■□□ 2.1
ATPAF1-202ENST00000371937 ZMAT2Q96NC0 199 aaKnown RBP28.15■■■□□ 2.1
ATPAF1-202ENST00000371937 TRPV6Q9H1D0 765 aa28.15■■■□□ 2.1
ATPAF1-202ENST00000371937 AGO3Q9H9G7 860 aaKnown RBP28.15■■■□□ 2.1
ATPAF1-202ENST00000371937 ERVK-5Q9HDB9 667 aa28.15■■■□□ 2.1
ATPAF1-202ENST00000371937 CISHQ9NSE2 258 aa28.15■■■□□ 2.1
ATPAF1-202ENST00000371937 NXF1Q9UBU9 619 aaKnown RBP28.15■■■□□ 2.1
ATPAF1-202ENST00000371937 PADI3Q9ULW8 664 aa28.15■■■□□ 2.1
ATPAF1-202ENST00000371937 UBQLN1Q9UMX0 589 aaKnown RBP28.15■■■□□ 2.1
ATPAF1-202ENST00000371937 URI1O94763 535 aaPredicted RBP28.15■■■□□ 2.1
ATPAF1-202ENST00000371937 MMEP08473 750 aa28.15■■■□□ 2.1
ATPAF1-202ENST00000371937 KCNE1P15382 129 aa28.15■■■□□ 2.1
ATPAF1-202ENST00000371937 NAP1L1P55209 391 aaKnown RBP28.15■■■□□ 2.1
ATPAF1-202ENST00000371937 FMO1Q01740 532 aa28.15■■■□□ 2.1
ATPAF1-202ENST00000371937 TMCO5BA8MYB1 307 aa28.14■■■□□ 2.1
ATPAF1-202ENST00000371937 GHRP10912 638 aa28.14■■■□□ 2.1
ATPAF1-202ENST00000371937 GALCP54803 685 aa28.14■■■□□ 2.1
ATPAF1-202ENST00000371937 MYO1EQ12965 1108 aa28.14■■■□□ 2.1
ATPAF1-202ENST00000371937 ZNF618Q5T7W0 954 aa28.14■■■□□ 2.1
ATPAF1-202ENST00000371937 DEFB118Q96PH6 123 aa28.14■■■□□ 2.1
ATPAF1-202ENST00000371937 BCO2Q9BYV7 579 aa28.14■■■□□ 2.1
ATPAF1-202ENST00000371937 ISCUQ9H1K1 167 aa28.14■■■□□ 2.1
ATPAF1-202ENST00000371937 RNF39Q9H2S5 420 aa28.14■■■□□ 2.1
ATPAF1-202ENST00000371937 FAM105AQ9NUU6 356 aa28.14■■■□□ 2.1
ATPAF1-202ENST00000371937 A0A0A6YYK5 440 aaPredicted RBP28.13■■■□□ 2.09
ATPAF1-202ENST00000371937 RIOK3O14730 519 aaKnown RBP28.13■■■□□ 2.09
ATPAF1-202ENST00000371937 RTN2O75298 545 aa28.13■■■□□ 2.09
ATPAF1-202ENST00000371937 MOCS3O95396 460 aa28.13■■■□□ 2.09
ATPAF1-202ENST00000371937 TMEM253P0C7T8 217 aa28.13■■■□□ 2.09
ATPAF1-202ENST00000371937 ZNF132P52740 706 aa28.13■■■□□ 2.09
ATPAF1-202ENST00000371937 LPIN1Q14693 890 aa28.13■■■□□ 2.09
ATPAF1-202ENST00000371937 IFI16Q16666 785 aaKnown RBP28.13■■■□□ 2.09
ATPAF1-202ENST00000371937 PALB2Q86YC2 1186 aa28.13■■■□□ 2.09
ATPAF1-202ENST00000371937 CTNNBL1Q8WYA6 563 aaPredicted RBP28.13■■■□□ 2.09
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms