RNA–Protein interactions for RNA: ENST00000370542.1

LMO4-201, Transcript of LIM domain only 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMO4, Length 1,260 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO4-201ENST00000370542 STK38Q15208 465 aa16.22■□□□□ 0.19
LMO4-201ENST00000370542 USP41Q3LFD5 358 aa16.22■□□□□ 0.19
LMO4-201ENST00000370542 HNRNPLLQ8WVV9 542 aaKnown RBP16.22■□□□□ 0.19
LMO4-201ENST00000370542 GOLGA1Q92805 767 aa16.22■□□□□ 0.19
LMO4-201ENST00000370542 USP28Q96RU2 1077 aa16.22■□□□□ 0.19
LMO4-201ENST00000370542 APOL6Q9BWW8 343 aa16.22■□□□□ 0.19
LMO4-201ENST00000370542 ACBD3Q9H3P7 528 aa16.22■□□□□ 0.19
LMO4-201ENST00000370542 PLEKHA4Q9H4M7 779 aa16.22■□□□□ 0.19
LMO4-201ENST00000370542 MAN1C1Q9NR34 630 aa16.22■□□□□ 0.19
LMO4-201ENST00000370542 DLL3Q9NYJ7 618 aa16.22■□□□□ 0.19
LMO4-201ENST00000370542 LRWD1Q9UFC0 647 aa16.22■□□□□ 0.19
LMO4-201ENST00000370542 LIMD1Q9UGP4 676 aa16.22■□□□□ 0.19
LMO4-201ENST00000370542 NOL12Q9UGY1 213 aaKnown RBP eCLIP16.22■□□□□ 0.19
LMO4-201ENST00000370542 FEZ2Q9UHY8 353 aaPredicted RBP16.22■□□□□ 0.19
LMO4-201ENST00000370542 CCDC151A5D8V7 595 aa16.21■□□□□ 0.19
LMO4-201ENST00000370542 LAD1O00515 517 aa16.21■□□□□ 0.19
LMO4-201ENST00000370542 C2CD2LO14523 706 aa16.21■□□□□ 0.19
LMO4-201ENST00000370542 ERLIN1O75477 346 aa16.21■□□□□ 0.19
LMO4-201ENST00000370542 GLUD1P00367 558 aa16.21■□□□□ 0.19
LMO4-201ENST00000370542 PRKCBP05771 671 aa16.21■□□□□ 0.19
LMO4-201ENST00000370542 PRPHP41219 470 aa16.21■□□□□ 0.19
LMO4-201ENST00000370542 EFNA5P52803 228 aa16.21■□□□□ 0.19
LMO4-201ENST00000370542 FANCCQ00597 558 aa16.21■□□□□ 0.19
LMO4-201ENST00000370542 PTGDRQ13258 359 aa16.21■□□□□ 0.19
LMO4-201ENST00000370542 PRPF4BQ13523 1007 aaKnown RBP16.21■□□□□ 0.19
LMO4-201ENST00000370542 CCDC149Q6ZUS6 474 aa16.21■□□□□ 0.19
LMO4-201ENST00000370542 OTOP3Q7RTS5 596 aa16.21■□□□□ 0.19
LMO4-201ENST00000370542 KIFAP3Q92845 792 aa16.21■□□□□ 0.19
LMO4-201ENST00000370542 ZNF707Q96C28 371 aaPredicted RBP16.21■□□□□ 0.19
LMO4-201ENST00000370542 ACSF2Q96CM8 615 aaPredicted RBP16.21■□□□□ 0.19
LMO4-201ENST00000370542 PAAF1Q9BRP4 392 aa16.21■□□□□ 0.19
LMO4-201ENST00000370542 BHMT2Q9H2M3 363 aa16.21■□□□□ 0.19
LMO4-201ENST00000370542 YY1AP1Q9H869 796 aa16.21■□□□□ 0.19
LMO4-201ENST00000370542 WDR6Q9NNW5 1121 aaKnown RBP16.21■□□□□ 0.19
LMO4-201ENST00000370542 SNTG2Q9NY99 539 aa16.21■□□□□ 0.19
LMO4-201ENST00000370542 KLK14Q9P0G3 267 aa16.21■□□□□ 0.19
LMO4-201ENST00000370542 PARP2Q9UGN5 583 aa16.21■□□□□ 0.19
LMO4-201ENST00000370542 HOOK1Q9UJC3 728 aaKnown RBP16.21■□□□□ 0.19
LMO4-201ENST00000370542 PCDHB6Q9Y5E3 794 aa16.21■□□□□ 0.19
LMO4-201ENST00000370542 EP300Q09472 2414 aaPredicted RBP16.2■□□□□ 0.18
LMO4-201ENST00000370542 DOCK8Q8NF50 2099 aa16.2■□□□□ 0.18
LMO4-201ENST00000370542 CCDC195A0A1B0GUA6 201 aa16.2■□□□□ 0.18
LMO4-201ENST00000370542 STX10O60499 249 aa16.2■□□□□ 0.18
LMO4-201ENST00000370542 N4BP1O75113 896 aaKnown RBP16.2■□□□□ 0.18
LMO4-201ENST00000370542 URI1O94763 535 aaPredicted RBP16.2■□□□□ 0.18
LMO4-201ENST00000370542 ASGR2P07307 311 aa16.2■□□□□ 0.18
LMO4-201ENST00000370542 CMA1P23946 247 aa16.2■□□□□ 0.18
LMO4-201ENST00000370542 TNNT3P45378 269 aaPredicted RBP16.2■□□□□ 0.18
LMO4-201ENST00000370542 CREMQ03060 361 aa16.2■□□□□ 0.18
LMO4-201ENST00000370542 RAD51AP2Q09MP3 1159 aa16.2■□□□□ 0.18
LMO4-201ENST00000370542 IL17AQ16552 155 aa16.2■□□□□ 0.18
LMO4-201ENST00000370542 NT5DC1Q5TFE4 455 aa16.2■□□□□ 0.18
LMO4-201ENST00000370542 CC2D1AQ6P1N0 951 aaPredicted RBP16.2■□□□□ 0.18
LMO4-201ENST00000370542 CXCL16Q9H2A7 254 aa16.2■□□□□ 0.18
LMO4-201ENST00000370542 EIF4ENIF1Q9NRA8 985 aaKnown RBP16.2■□□□□ 0.18
LMO4-201ENST00000370542 ZDHHC7Q9NXF8 308 aa16.2■□□□□ 0.18
LMO4-201ENST00000370542 DACH1Q9UI36 760 aa16.2■□□□□ 0.18
LMO4-201ENST00000370542 PCDHA7Q9UN72 937 aa16.2■□□□□ 0.18
LMO4-201ENST00000370542 TMEM189-UBE2V1I3L0A0 370 aa16.19■□□□□ 0.18
LMO4-201ENST00000370542 TGM5O43548 720 aa16.19■□□□□ 0.18
LMO4-201ENST00000370542 RECQL4O94761 1208 aa16.19■□□□□ 0.18
LMO4-201ENST00000370542 THP07101 528 aa16.19■□□□□ 0.18
LMO4-201ENST00000370542 OAS2P29728 719 aaKnown RBP16.19■□□□□ 0.18
LMO4-201ENST00000370542 CCT6AP40227 531 aaKnown RBP16.19■□□□□ 0.18
LMO4-201ENST00000370542 MYL5Q02045 173 aa16.19■□□□□ 0.18
LMO4-201ENST00000370542 DCAF4L1Q3SXM0 396 aa16.19■□□□□ 0.18
LMO4-201ENST00000370542 XKR4Q5GH76 650 aa16.19■□□□□ 0.18
LMO4-201ENST00000370542 CT47A1Q5JQC4 288 aaPredicted RBP16.19■□□□□ 0.18
LMO4-201ENST00000370542 RTP2Q5QGT7 225 aa16.19■□□□□ 0.18
LMO4-201ENST00000370542 EEF1DP3Q658K8 133 aa16.19■□□□□ 0.18
LMO4-201ENST00000370542 ASTLQ6HA08 431 aaPredicted RBP16.19■□□□□ 0.18
LMO4-201ENST00000370542 TRIM65Q6PJ69 517 aa16.19■□□□□ 0.18
LMO4-201ENST00000370542 ELMSAN1Q6PJG2 1045 aa16.19■□□□□ 0.18
LMO4-201ENST00000370542 LEKR1Q6ZMV7 388 aa16.19■□□□□ 0.18
LMO4-201ENST00000370542 ZBTB33Q86T24 672 aa16.19■□□□□ 0.18
LMO4-201ENST00000370542 DAW1Q8N136 415 aa16.19■□□□□ 0.18
LMO4-201ENST00000370542 KCTD17Q8N5Z5 321 aa16.19■□□□□ 0.18
LMO4-201ENST00000370542 LINC00301Q8NCQ3 95 aa16.19■□□□□ 0.18
LMO4-201ENST00000370542 PIK3R5Q8WYR1 880 aa16.19■□□□□ 0.18
LMO4-201ENST00000370542 B3GALT6Q96L58 329 aa16.19■□□□□ 0.18
LMO4-201ENST00000370542 ADPGKQ9BRR6 497 aa16.19■□□□□ 0.18
LMO4-201ENST00000370542 MMTAG2Q9BU76 263 aaKnown RBP16.19■□□□□ 0.18
LMO4-201ENST00000370542 NT5C3AQ9H0P0 336 aa16.19■□□□□ 0.18
LMO4-201ENST00000370542 SMOC2Q9H3U7 446 aa16.19■□□□□ 0.18
LMO4-201ENST00000370542 PTPRHQ9HD43 1115 aa16.19■□□□□ 0.18
LMO4-201ENST00000370542 IGSF9Q9P2J2 1179 aa16.19■□□□□ 0.18
LMO4-201ENST00000370542 EPS15L1Q9UBC2 864 aa16.19■□□□□ 0.18
LMO4-201ENST00000370542 KIAA1024Q9UPX6 916 aa16.19■□□□□ 0.18
LMO4-201ENST00000370542 SF3B1O75533 1304 aaKnown RBP eCLIP16.19■□□□□ 0.18
LMO4-201ENST00000370542 SPTLC2O15270 562 aa16.18■□□□□ 0.18
LMO4-201ENST00000370542 TADA2AO75478 443 aa16.18■□□□□ 0.18
LMO4-201ENST00000370542 RFPL2O75678 378 aa16.18■□□□□ 0.18
LMO4-201ENST00000370542 UBASH3AP57075 661 aa16.18■□□□□ 0.18
LMO4-201ENST00000370542 ZSCAN26Q16670 478 aa16.18■□□□□ 0.18
LMO4-201ENST00000370542 HYIQ5T013 277 aa16.18■□□□□ 0.18
LMO4-201ENST00000370542 ALKAL1Q6UXT8 129 aa16.18■□□□□ 0.18
LMO4-201ENST00000370542 RSRC2Q7L4I2 434 aaKnown RBP16.18■□□□□ 0.18
LMO4-201ENST00000370542 VSTM4Q8IW00 320 aa16.18■□□□□ 0.18
LMO4-201ENST00000370542 CEP112Q8N8E3 955 aa16.18■□□□□ 0.18
LMO4-201ENST00000370542 DEPTORQ8TB45 409 aa16.18■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms