RNA–Protein interactions for RNA: ENST00000370025.8

PRPF38B-203, Transcript of pre-mRNA processing factor 38B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF38B, Length 3,693 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38B-203ENST00000370025 GPC3P51654 580 aa10.66□□□□□ -0.7
PRPF38B-203ENST00000370025 ELF3P78545 371 aaPredicted RBP10.66□□□□□ -0.7
PRPF38B-203ENST00000370025 LAMTOR4Q0VGL1 99 aa10.66□□□□□ -0.7
PRPF38B-203ENST00000370025 DRP2Q13474 957 aa10.66□□□□□ -0.7
PRPF38B-203ENST00000370025 RBBP5Q15291 538 aaKnown RBP10.66□□□□□ -0.7
PRPF38B-203ENST00000370025 GKAP1Q5VSY0 366 aaPredicted RBP10.66□□□□□ -0.7
PRPF38B-203ENST00000370025 ZPBP2Q6X784 338 aa10.66□□□□□ -0.7
PRPF38B-203ENST00000370025 PPM1KQ8N3J5 372 aa10.66□□□□□ -0.7
PRPF38B-203ENST00000370025 LRRC71Q8N4P6 559 aa10.66□□□□□ -0.7
PRPF38B-203ENST00000370025 MRPL4Q9BYD3 311 aaKnown RBP10.66□□□□□ -0.7
PRPF38B-203ENST00000370025 GPR88Q9GZN0 384 aa10.66□□□□□ -0.7
PRPF38B-203ENST00000370025 RAB20Q9NX57 234 aa10.66□□□□□ -0.7
PRPF38B-203ENST00000370025 ANKFY1Q9P2R3 1169 aa10.66□□□□□ -0.7
PRPF38B-203ENST00000370025 SUCLA2Q9P2R7 463 aaPredicted RBP10.66□□□□□ -0.7
PRPF38B-203ENST00000370025 SALL4Q9UJQ4 1053 aa10.66□□□□□ -0.7
PRPF38B-203ENST00000370025 INTUQ9ULD6 942 aa10.66□□□□□ -0.7
PRPF38B-203ENST00000370025 ATP8B3O60423 1300 aa10.66□□□□□ -0.7
PRPF38B-203ENST00000370025 DDX3XO00571 662 aaKnown RBP eCLIP10.66□□□□□ -0.75e-9■□□□□ 8.9
PRPF38B-203ENST00000370025 PDHA1P08559 390 aa10.66□□□□□ -0.7
PRPF38B-203ENST00000370025 TNNI1P19237 187 aa10.66□□□□□ -0.7
PRPF38B-203ENST00000370025 MAGOHP61326 146 aaKnown RBP10.66□□□□□ -0.7
PRPF38B-203ENST00000370025 GRB14Q14449 540 aa10.66□□□□□ -0.7
PRPF38B-203ENST00000370025 KIF22Q14807 665 aa10.66□□□□□ -0.7
PRPF38B-203ENST00000370025 PSMD6Q15008 389 aa10.66□□□□□ -0.7
PRPF38B-203ENST00000370025 TMEM63BQ5T3F8 832 aa10.66□□□□□ -0.7
PRPF38B-203ENST00000370025 MAMDC4Q6UXC1 1216 aa10.66□□□□□ -0.7
PRPF38B-203ENST00000370025 SV2AQ7L0J3 742 aa10.66□□□□□ -0.7
PRPF38B-203ENST00000370025 RNF149Q8NC42 400 aa10.66□□□□□ -0.7
PRPF38B-203ENST00000370025 MAGOHBQ96A72 148 aaKnown RBP10.66□□□□□ -0.7
PRPF38B-203ENST00000370025 PACSIN1Q9BY11 444 aa10.66□□□□□ -0.7
PRPF38B-203ENST00000370025 TSKSQ9UJT2 592 aa10.66□□□□□ -0.7
PRPF38B-203ENST00000370025 ZBTB42B2RXF5 422 aa10.66□□□□□ -0.7
PRPF38B-203ENST00000370025 KIF3CO14782 793 aa10.66□□□□□ -0.7
PRPF38B-203ENST00000370025 PRLRP16471 622 aa10.66□□□□□ -0.7
PRPF38B-203ENST00000370025 ACOT2P49753 483 aa10.66□□□□□ -0.7
PRPF38B-203ENST00000370025 GRIK3Q13003 919 aa10.66□□□□□ -0.7
PRPF38B-203ENST00000370025 MAPK6Q16659 721 aa10.66□□□□□ -0.7
PRPF38B-203ENST00000370025 ZNF484Q5JVG2 852 aa10.66□□□□□ -0.7
PRPF38B-203ENST00000370025 CST9Q5W186 159 aa10.66□□□□□ -0.7
PRPF38B-203ENST00000370025 METTL13Q8N6R0 699 aa10.66□□□□□ -0.7
PRPF38B-203ENST00000370025 PPTC7Q8NI37 304 aa10.66□□□□□ -0.7
PRPF38B-203ENST00000370025 AGAP11Q8TF27 550 aa10.66□□□□□ -0.7
PRPF38B-203ENST00000370025 ZBTB45Q96K62 511 aaPredicted RBP10.66□□□□□ -0.7
PRPF38B-203ENST00000370025 TCHPQ9BT92 498 aa10.66□□□□□ -0.7
PRPF38B-203ENST00000370025 TOPORSQ9NS56 1045 aaPredicted RBP10.66□□□□□ -0.7
PRPF38B-203ENST00000370025 CNOT8Q9UFF9 292 aaKnown RBP10.66□□□□□ -0.7
PRPF38B-203ENST00000370025 A0A0B4J269 797 aa10.65□□□□□ -0.7
PRPF38B-203ENST00000370025 SLC15A5A6NIM6 579 aa10.65□□□□□ -0.7
PRPF38B-203ENST00000370025 CLDN3O15551 220 aa10.65□□□□□ -0.7
PRPF38B-203ENST00000370025 ASAP2O43150 1006 aa10.65□□□□□ -0.7
PRPF38B-203ENST00000370025 TCP1P17987 556 aaKnown RBP10.65□□□□□ -0.7
PRPF38B-203ENST00000370025 EFCAB12Q6NXP0 572 aa10.65□□□□□ -0.7
PRPF38B-203ENST00000370025 TLDC1Q6P9B6 456 aa10.65□□□□□ -0.7
PRPF38B-203ENST00000370025 RHPN2Q8IUC4 686 aa10.65□□□□□ -0.7
PRPF38B-203ENST00000370025 GLYCTKQ8IVS8 523 aa10.65□□□□□ -0.7
PRPF38B-203ENST00000370025 CCDC26Q8TAB7 109 aa10.65□□□□□ -0.7
PRPF38B-203ENST00000370025 TAS1R2Q8TE23 839 aa10.65□□□□□ -0.7
PRPF38B-203ENST00000370025 CASKIN2Q8WXE0 1202 aa10.65□□□□□ -0.7
PRPF38B-203ENST00000370025 RAPGEF5Q92565 580 aa10.65□□□□□ -0.7
PRPF38B-203ENST00000370025 SEMA4DQ92854 862 aa10.65□□□□□ -0.7
PRPF38B-203ENST00000370025 MAML3Q96JK9 1138 aa10.65□□□□□ -0.7
PRPF38B-203ENST00000370025 FAM81BQ96LP2 452 aa10.65□□□□□ -0.7
PRPF38B-203ENST00000370025 ACTR5Q9H9F9 607 aaPredicted RBP10.65□□□□□ -0.7
PRPF38B-203ENST00000370025 RBAKQ9NYW8 714 aaPredicted RBP10.65□□□□□ -0.7
PRPF38B-203ENST00000370025 HYOU1Q9Y4L1 999 aa10.65□□□□□ -0.7
PRPF38B-203ENST00000370025 SNAI1O95863 264 aaPredicted RBP10.65□□□□□ -0.7
PRPF38B-203ENST00000370025 LGALS2P05162 132 aa10.65□□□□□ -0.7
PRPF38B-203ENST00000370025 VIMP08670 466 aaKnown RBP10.65□□□□□ -0.7
PRPF38B-203ENST00000370025 ADCYAP1R1P41586 468 aa10.65□□□□□ -0.7
PRPF38B-203ENST00000370025 ZNF157P51786 506 aaPredicted RBP10.65□□□□□ -0.7
PRPF38B-203ENST00000370025 NLRP11P59045 1033 aaKnown RBP10.65□□□□□ -0.7
PRPF38B-203ENST00000370025 IFFO1Q0D2I5 559 aa10.65□□□□□ -0.7
PRPF38B-203ENST00000370025 MKRN4PQ13434 485 aaPredicted RBP10.65□□□□□ -0.7
PRPF38B-203ENST00000370025 KRT71Q3SY84 523 aa10.65□□□□□ -0.7
PRPF38B-203ENST00000370025 GJC2Q5T442 439 aaPredicted RBP10.65□□□□□ -0.7
PRPF38B-203ENST00000370025 CCDC50Q8IVM0 306 aa10.65□□□□□ -0.7
PRPF38B-203ENST00000370025 IQCKQ8N0W5 287 aa10.65□□□□□ -0.7
PRPF38B-203ENST00000370025 SLC30A5Q8TAD4 765 aa10.65□□□□□ -0.7
PRPF38B-203ENST00000370025 EMID1Q96A84 441 aaPredicted RBP10.65□□□□□ -0.7
PRPF38B-203ENST00000370025 AGPAT1Q99943 283 aa10.65□□□□□ -0.7
PRPF38B-203ENST00000370025 ABHD16BQ9H3Z7 469 aa10.65□□□□□ -0.7
PRPF38B-203ENST00000370025 NMRK2Q9NPI5 230 aa10.65□□□□□ -0.7
PRPF38B-203ENST00000370025 SIP14410 1827 aa10.65□□□□□ -0.7
PRPF38B-203ENST00000370025 ZC3H11AO75152 810 aaKnown RBP eCLIP10.65□□□□□ -0.77e-6■■■■■ 33.7
PRPF38B-203ENST00000370025 SMIM24O75264 130 aa10.65□□□□□ -0.7
PRPF38B-203ENST00000370025 PALMO75781 387 aa10.65□□□□□ -0.7
PRPF38B-203ENST00000370025 PRKCBP05771 671 aa10.65□□□□□ -0.7
PRPF38B-203ENST00000370025 PAK2Q13177 524 aa10.65□□□□□ -0.7
PRPF38B-203ENST00000370025 WDR44Q5JSH3 913 aa10.65□□□□□ -0.7
PRPF38B-203ENST00000370025 CDCA2Q69YH5 1023 aaPredicted RBP10.65□□□□□ -0.7
PRPF38B-203ENST00000370025 AFG1LQ8WV93 481 aa10.65□□□□□ -0.7
PRPF38B-203ENST00000370025 TRAPPC12Q8WVT3 735 aa10.65□□□□□ -0.7
PRPF38B-203ENST00000370025 ELAC2Q9BQ52 826 aaKnown RBP10.65□□□□□ -0.7
PRPF38B-203ENST00000370025 TINF2Q9BSI4 451 aa10.65□□□□□ -0.7
PRPF38B-203ENST00000370025 AP1M1Q9BXS5 423 aa10.65□□□□□ -0.7
PRPF38B-203ENST00000370025 RNPEPQ9H4A4 650 aa10.65□□□□□ -0.7
PRPF38B-203ENST00000370025 LRRC4CQ9HCJ2 640 aa10.65□□□□□ -0.7
PRPF38B-203ENST00000370025 MANSC4A6NHS7 340 aaPredicted RBP10.64□□□□□ -0.71
PRPF38B-203ENST00000370025 MAGEB2O15479 319 aa10.64□□□□□ -0.71
PRPF38B-203ENST00000370025 TOM1L1O75674 476 aa10.64□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms